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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100931g2.4618.mrna |
Orig protein id | gnl|cribi|Naga_100931g2.4618 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002474.1 | supercontig | CM002474.1:54250..55445 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7823 ID=rna7823|Name=rna7823|organism=Nannochloropsis gaditana|type=mRNA|length=1850bp CCTATCATTCTACCCGGGGCTTCCCGGCGTCCTCCTTCCCCCCTTTCCTC CCGTACCGACTGACCTTCTCCGGAAAGCATTGCGAGACGAAGGTGGAAAT GAGGGAGGACTTTCCTGCCCCTCGGTCTCCAAGGAGGAGAATGCGCACGG TGTCTTTCATGCCCCCCTGGTGATGTAGGTAGAGCACACGGGGAGAAGCA ATTAAGACCGGTCTCCACCCTGGCATCATGTTGTAAGCCGCCTCCGTCGA AAAAACATACTCCTTTGGCGCATAATTACAATCACATCACACATTCCCTG GGATTGTGACGGCCAAATGCTGAAAATGTCGTTGCTTCCACCAGGATCGA GATCGCGGCGGGAATAGCTAGAAGCCCCGAGCCTGCTTCCTTGCCTCTTT GAACACATCACCGAATGAGTACGCACCGGTCCATAACGCAAAGCACGCGG GCTCCACGACGCAAAGTACGTGGGGGTTGACCTGTTCGTGCGCGTTTCCT CAACATGTTGCCGCACCGTGTTCAAGAGAAGGACTCCGTGCATCTACAGG GCTCGCCACCCCGCTTCAAGAAGCAGTACTAGCAGGAGCGAGCGCTCGAC TCGATCGATACTCTCAGGTTTCGGTCACACAAATCGACGTGCCTTCACCC ACAGCCACGTACTATCTCAGCCACATGGCCAGGTAGGACAATGTCTTTCT TGCGGATACTGGACCATGACCTGGACGACCCGCTGTTCCTTCGTCTCTTC GACTCTCTTGGCCTGAACTCCCATCAAGAAGTCGAGCTCATCCATGTCCT GAAACGGATCACCACGCCGATGGAGACCTTGATAGCCCGAGGCCGGAGCA GAGAGGCACTTGCCTTCTTGGAGAAACGACAGCAACAACGACAACAATTG CAACGACAACAAAGACAACCGCCACAACCATTAGTAGAAGAAGAAGCACG ACTATCGCCACAGACCTGTGTAGCGGCACCCTTTCCCGGGCCGGGACCGA GTGTGTGGGGCACCGTGCAGGAAGCGGGGCAGGCCGCCGTTCCACGCCTT CCCTCCTCCTCGCCCTGCTTCCACCTCAGAGACCCCACAGTGCCTTCCCC GGCGGCCCTTACTGCGAGCCCAGCCTTGGCCCAGGGGCATGCGTCGCGCC AAGACGCACCGGCACGCCGGGTGCTCGTTACTTTTTCCAGTGGCAGGTGC CAGGCCGCAGGGGCGAAGAGGTTCCTCTATTCTTCGCACAGGGCGAGCCG GGCCGGGGAGGACGCCTTCGTGGAGGAGATCCAGGAGCAGGTGCGGCAAT GGCGGGACTCCGGGGGGGGAAGAGGAGGGAGCGAGGGGGAAGAGACGTAC AGTGTCAGCGTCAATTTCTCCCCGTCGGGCGCACTGAAGAAGACGGTGTG GAAAGTGACGGCGGGGGAGGGAAGGAAGGGAGGGGGGAGGGAGGGGGAGA GGAAGACACCGACTTCGATGTGTTGGCGAACGTGTCGCTGCTCCGTGTCT CCACTCCCGCGCTTCCCGCCCTTTCCCCCCCCTCGCCCTCCTCCGCACCT TCCCCCTTGTCTCCCTCCTCCCTCCCACCCGCCCCCTCCCTCACGTGAGT CCAAAGCAACAACAAGCTTGGTTGATGCCGCGTACTTGCTTTCGTCGGAT TATGACGCCCCTTTTTTTTCTCTTTTTTTCCGGTTCCATCTCCATCTTGA TCGTTGAAGTCCCCCCCTGGAACGGGCGCTCCTTCCCCTTGATCCCCTCA CCAGTCGAGCCTCTGCACCACCCTTTCTTCCCTTCCGTCCCTGCCTCGTC AGAAACCTACACTAGTACGCTTGCACACACGATCCTCCCCTCTCCCCTCC back to topprotein sequence of rna7823 >rna7823-protein ID=rna7823-protein|Name=rna7823|organism=Nannochloropsis gaditana|type=polypeptide|length=228bp MLLRVLAAKSVDFWTVIAESRGGLLASSPAPLRPPRPGSCVIRSCDLDIP HAYNRKMTIVTTAAAAVLRLSRRRCTASLHQTMRHVRPSPFSTNASGRAH TPPHHLEVTPEVRRRNRFVALACVVFAGSVYTYSIRKLKEEDLSDLEEEV TVVNLHESGLKATKFKSLLEESRGDAAAEAAEEAVEEEMERQLEQGVVEG VAMIAEEEGRGEEGGKGGWKRWVFFWRR back to topmRNA from alignment at CM002474.1:54250..55445- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7823 ID=rna7823|Name=rna7823|organism=Nannochloropsis gaditana|type=mRNA|length=1196bp|location=Sequence derived from alignment at CM002474.1:54250..55445- (Nannochloropsis gaditana) ATGCTGTTACGCGTCCTGGCGGCCAAAAGCGTGGACTTTTGGACAGTGAT
AGCCGAGTCAAGGTATCACTAGCCTGTCGCCTAGTGCTTCTTCAGCGACA
GCACACGGGAAATTGAAAATGGGAAAGGGATTAAAGCCCACACCAGGAGT
GGAAAAAAGCCGCACCACCGCATCACTATCTTTTGTTTGCCATGGTTTTC
CATCTGTATGTGACGCTTTTGCCATGACCCATTCCTTGCACATTAAGAGG
CGGTCTGCTTGCTTCAAGCCCCGCTCCTCTTCGACCTCCCCGGCCTGGGA
GCTGCGTCATTCGGAGCTGCGATCTCGATATACCACACGCATATAATCGG
AAGATGACCATCGTCACGACCGCGGCGGCTGCGGTACTTCGTCTGAGCCG
CAGAAGATGTACAGCTTCCTTGCACCAGACCATGCGCCATGTGCGCCCGT
CACCCTTCTCGACAAATGCGAGCGGACGAGTAAGTGCATTCAGTAGATTG
GCAGCCTTCTATTTTGCCTACCACATGCTGGCCTCATTTACCTTTACCCC
TGAATGTAGGCGCATACACCGCCCCATCATCTGGAAGTGACACCGGAAGT
CCGGCGGCGCAATCGGTTCGTCGCATTGGCATGCGTGGTCTTTGCGGGGT
CTGTCTACACGTACTCGATCCGGAAATTGAAAGAGGTACGTCCGGCGCGG
GCACGGGAAAGAACGTGCACGGAGGCGTCAACCTCCTCAGCGGTGTCGCT
TTGGACCATGGTGTTATTGATTTTGTGAATGGGCGGCTACCCTCGTGTGA
TCTGTGCGCAATGGCGGCGCTATCGTGTCGGAACGAGAACGAGGCTCGGA
TCCAGATGTCGATCCTGAGAGACTTCCACCACCACCTCCACTCCCTCTCA
AATCGTCTCCTTCCCTCCCTTTCCTCCAGGAGGACCTGTCGGACCTGGAA
GAGGAAGTGACGGTGGTGAACTTGCACGAAAGCGGGTTGAAGGCCACCAA
GTTCAAGAGCCTCCTAGAGGAGAGCCGGGGGGACGCGGCGGCGGAGGCGG
CGGAGGAGGCGGTGGAGGAGGAGATGGAGCGGCAGCTAGAGCAAGGGGTG
GTGGAGGGGGTGGCCATGATCGCGGAGGAGGAAGGGAGGGGGGAGGAGGG
AGGGAAGGGGGGTTGGAAACGCTGGGTTTTCTTCTGGCGGCGATGA back to topCoding sequence (CDS) from alignment at CM002474.1:54250..55445- >rna7823 ID=rna7823|Name=rna7823|organism=Nannochloropsis gaditana|type=CDS|length=2748bp|location=Sequence derived from alignment at CM002474.1:54250..55445- (Nannochloropsis gaditana) GAGGACCTGTCGGACCTGGAAGAGGAAGTGACGGTGGTGAACTTGCACGA AAGCGGGTTGAAGGCCACCAAGTTCAAGAGCCTCCTAGAGGAGAGCCGGG GGGACGCGGCGGCGGAGGCGGCGGAGGAGGCGGTGGAGGAGGAGATGGAG CGGCAGCTAGAGCAAGGGGTGGTGGAGGGGGTGGCCATGATCGCGGAGGA GGAAGGGAGGGGGGAGGAGGGAGGGAAGGGGGGTTGGAAACGCTGGGTTT TCTTCTGGCGGCGATGAGCGCATACACCGCCCCATCATCTGGAAGTGACA CCGGAAGTCCGGCGGCGCAATCGGTTCGTCGCATTGGCATGCGTGGTCTT TGCGGGGTCTGTCTACACGTACTCGATCCGGAAATTGAAAGAGAGGCGGT CTGCTTGCTTCAAGCCCCGCTCCTCTTCGACCTCCCCGGCCTGGGAGCTG CGTCATTCGGAGCTGCGATCTCGATATACCACACGCATATAATCGGAAGA TGACCATCGTCACGACCGCGGCGGCTGCGGTACTTCGTCTGAGCCGCAGA AGATGTACAGCTTCCTTGCACCAGACCATGCGCCATGTGCGCCCGTCACC CTTCTCGACAAATGCGAGCGGACGAATGCTGTTACGCGTCCTGGCGGCCA AAAGCGTGGACTTTTGGACAGTGATAGCCGAGTCAAGGAGGACCTGTCGG ACCTGGAAGAGGAAGTGACGGTGGTGAACTTGCACGAAAGCGGGTTGAAG GCCACCAAGTTCAAGAGCCTCCTAGAGGAGAGCCGGGGGGACGCGGCGGC GGAGGCGGCGGAGGAGGCGGTGGAGGAGGAGATGGAGCGGCAGCTAGAGC AAGGGGTGGTGGAGGGGGTGGCCATGATCGCGGAGGAGGAAGGGAGGGGG GAGGAGGGAGGGAAGGGGGGTTGGAAACGCTGGGTTTTCTTCTGGCGGCG ATGAGCGCATACACCGCCCCATCATCTGGAAGTGACACCGGAAGTCCGGC GGCGCAATCGGTTCGTCGCATTGGCATGCGTGGTCTTTGCGGGGTCTGTC TACACGTACTCGATCCGGAAATTGAAAGAGAGGCGGTCTGCTTGCTTCAA GCCCCGCTCCTCTTCGACCTCCCCGGCCTGGGAGCTGCGTCATTCGGAGC TGCGATCTCGATATACCACACGCATATAATCGGAAGATGACCATCGTCAC GACCGCGGCGGCTGCGGTACTTCGTCTGAGCCGCAGAAGATGTACAGCTT CCTTGCACCAGACCATGCGCCATGTGCGCCCGTCACCCTTCTCGACAAAT GCGAGCGGACGAATGCTGTTACGCGTCCTGGCGGCCAAAAGCGTGGACTT TTGGACAGTGATAGCCGAGTCAAGGAGGACCTGTCGGACCTGGAAGAGGA AGTGACGGTGGTGAACTTGCACGAAAGCGGGTTGAAGGCCACCAAGTTCA AGAGCCTCCTAGAGGAGAGCCGGGGGGACGCGGCGGCGGAGGCGGCGGAG GAGGCGGTGGAGGAGGAGATGGAGCGGCAGCTAGAGCAAGGGGTGGTGGA GGGGGTGGCCATGATCGCGGAGGAGGAAGGGAGGGGGGAGGAGGGAGGGA AGGGGGGTTGGAAACGCTGGGTTTTCTTCTGGCGGCGATGAGCGCATACA CCGCCCCATCATCTGGAAGTGACACCGGAAGTCCGGCGGCGCAATCGGTT CGTCGCATTGGCATGCGTGGTCTTTGCGGGGTCTGTCTACACGTACTCGA TCCGGAAATTGAAAGAGAGGCGGTCTGCTTGCTTCAAGCCCCGCTCCTCT TCGACCTCCCCGGCCTGGGAGCTGCGTCATTCGGAGCTGCGATCTCGATA TACCACACGCATATAATCGGAAGATGACCATCGTCACGACCGCGGCGGCT GCGGTACTTCGTCTGAGCCGCAGAAGATGTACAGCTTCCTTGCACCAGAC CATGCGCCATGTGCGCCCGTCACCCTTCTCGACAAATGCGAGCGGACGAA TGCTGTTACGCGTCCTGGCGGCCAAAAGCGTGGACTTTTGGACAGTGATA GCCGAGTCAAGGAGGACCTGTCGGACCTGGAAGAGGAAGTGACGGTGGTG AACTTGCACGAAAGCGGGTTGAAGGCCACCAAGTTCAAGAGCCTCCTAGA GGAGAGCCGGGGGGACGCGGCGGCGGAGGCGGCGGAGGAGGCGGTGGAGG AGGAGATGGAGCGGCAGCTAGAGCAAGGGGTGGTGGAGGGGGTGGCCATG ATCGCGGAGGAGGAAGGGAGGGGGGAGGAGGGAGGGAAGGGGGGTTGGAA ACGCTGGGTTTTCTTCTGGCGGCGATGAGCGCATACACCGCCCCATCATC TGGAAGTGACACCGGAAGTCCGGCGGCGCAATCGGTTCGTCGCATTGGCA TGCGTGGTCTTTGCGGGGTCTGTCTACACGTACTCGATCCGGAAATTGAA AGAGAGGCGGTCTGCTTGCTTCAAGCCCCGCTCCTCTTCGACCTCCCCGG CCTGGGAGCTGCGTCATTCGGAGCTGCGATCTCGATATACCACACGCATA TAATCGGAAGATGACCATCGTCACGACCGCGGCGGCTGCGGTACTTCGTC TGAGCCGCAGAAGATGTACAGCTTCCTTGCACCAGACCATGCGCCATGTG CGCCCGTCACCCTTCTCGACAAATGCGAGCGGACGAATGCTGTTACGCGT CCTGGCGGCCAAAAGCGTGGACTTTTGGACAGTGATAGCCGAGTCAAG back to top
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