EWM22873.1, cds7799 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|585103525|gb|EWM22873.1| (BTB/Kelch-associated [Nannochloropsis gaditana]) HSP 1 Score: 318.161 bits (814), Expect = 4.540e-110 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MLPETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSRRDLWKCQDSIQGARAVSSDGLLAMPHHIKGGKAERRGKGLKEGRDRGLSGLMPGRNRVCPRHSCS 154 MLPETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSRRDLWKCQDSIQGARAVSSDGLLAMPHHIKGGKAERRGKGLKEGRDRGLSGLMPGRNRVCPRHSCS Sbjct: 1 MLPETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSRRDLWKCQDSIQGARAVSSDGLLAMPHHIKGGKAERRGKGLKEGRDRGLSGLMPGRNRVCPRHSCS 154
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|1173951141|gb|OQR99054.1| (regulator of chromosome condensation (RCC1)-like protein [Achlya hypogyna]) HSP 1 Score: 111.694 bits (278), Expect = 8.547e-26 Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 PE AIELF AADMY ++RLK CE V Q GL +ENA LL A++ +A L+D+C+ FIVRHFD TKTE F LSRELILE LQ+R Sbjct: 463 PEMAIELFAAADMYTLDRLKGLCELVVQKGLTVENAGVLLSAADDLHAGRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 549
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|1173949033|gb|OQR97108.1| (regulator of chromosome condensation (RCC1) [Thraustotheca clavata]) HSP 1 Score: 110.923 bits (276), Expect = 2.102e-25 Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 PE AIEL+ AADMY ++RLK CE V Q GL++ENA LL A++ A L+D+C+ FIVRHFD TKTE F LSRELILE LQ+R Sbjct: 715 PEMAIELYAAADMYTLDRLKGLCEIVVQKGLSVENAGMLLSAADDLQASRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 801
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|669148010|ref|XP_008609567.1| (hypothetical protein, variant [Saprolegnia diclina VS20] >gi|530738545|gb|EQC36787.1| hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 110.153 bits (274), Expect = 2.832e-25 Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 PE AIEL+ AADMY ++RLK CE V Q GL +ENA LL A+ +A L+D+C+ FIVRHFD TKTE F LSRELILE LQ+R Sbjct: 460 PELAIELYAAADMYTLDRLKGLCELVVQKGLTVENAGVLLSAADELHAGRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 546
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|669148012|ref|XP_008609568.1| (hypothetical protein SDRG_05620 [Saprolegnia diclina VS20] >gi|530738544|gb|EQC36786.1| hypothetical protein SDRG_05620 [Saprolegnia diclina VS20]) HSP 1 Score: 110.153 bits (274), Expect = 2.899e-25 Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 PE AIEL+ AADMY ++RLK CE V Q GL +ENA LL A+ +A L+D+C+ FIVRHFD TKTE F LSRELILE LQ+R Sbjct: 466 PELAIELYAAADMYTLDRLKGLCELVVQKGLTVENAGVLLSAADELHAGRLRDLCMHFIVRHFDTVTKTEGFQLLSRELILETLQNR 552
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|635366944|emb|CCI44832.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 109.383 bits (272), Expect = 5.061e-25 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 P AIEL+ AAD+Y ++RLK+ CE + +N++NAAT LQ A+ N L+ IC+SFIVRHFD TKT+ FA LSR+LILE+LQ R Sbjct: 459 PHIAIELYAAADLYTLDRLKKICEALVHRAINVDNAATFLQAADELNCDRLRHICVSFIVRHFDTVTKTQGFANLSRDLILEILQIR 545
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|635366945|emb|CCI44833.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 109.383 bits (272), Expect = 5.600e-25 Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 P AIEL+ AAD+Y ++RLK+ CE + +N++NAAT LQ A+ N L+ IC+SFIVRHFD TKT+ FA LSR+LILE+LQ R Sbjct: 457 PHIAIELYAAADLYTLDRLKKICEALVHRAINVDNAATFLQAADELNCDRLRHICVSFIVRHFDTVTKTQGFANLSRDLILEILQIR 543
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|813121722|ref|XP_012196477.1| (hypothetical protein SPRG_02515 [Saprolegnia parasitica CBS 223.65] >gi|641539001|gb|KDO32822.1| hypothetical protein SPRG_02515 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 108.612 bits (270), Expect = 8.697e-25 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 0 Query: 3 PETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 PE AIEL+ AADMY ++RLK CE V Q GL +ENA LL A+ +A L+D+C+ FIVRHFD TKTE F LSR+LILE LQ+R Sbjct: 446 PELAIELYAAADMYTLDRLKGLCELVVQKGLAVENAGVLLSAADELHATRLRDLCMHFIVRHFDTVTKTEGFQLLSRDLILETLQNR 532
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|673016792|ref|XP_008862357.1| (hypothetical protein H310_01110 [Aphanomyces invadans] >gi|574481560|gb|ETW08552.1| hypothetical protein H310_01110 [Aphanomyces invadans]) HSP 1 Score: 107.842 bits (268), Expect = 2.228e-24 Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 0 Query: 1 MLPETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 M E AIEL+ ADMYG++RLK CE + Q GL ++NA+ LLQ A+ A L++IC+ FIVRHFD TKTE F LSR+LILE LQ+R Sbjct: 459 MKAEMAIELYACADMYGLDRLKGLCEAMVQKGLVVDNASVLLQAADELQASRLREICMHFIVRHFDYVTKTEGFHMLSRDLILETLQNR 547
BLAST of EWM22873.1 vs. NCBI_GenBank
Match: gi|698777560|ref|XP_009821824.1| (hypothetical protein H257_00711 [Aphanomyces astaci] >gi|574123949|gb|ETV89424.1| hypothetical protein H257_00711 [Aphanomyces astaci]) HSP 1 Score: 107.071 bits (266), Expect = 3.913e-24 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0 Query: 1 MLPETAIELFIAADMYGVERLKRACENVFQTGLNIENAATLLQTAENFNARALKDICLSFIVRHFDQATKTEAFAGLSRELILEVLQSR 89 M E AIEL+ ADMYG++RLK CE + Q GL ++NA LLQ A+ +A L++IC+ FI+RHFD TKTE F LSR+LILE LQ+R Sbjct: 459 MTAEMAIELYACADMYGLDRLKGLCEVLVQKGLVVDNAGVLLQAADELHASRLREICMHFIIRHFDYVTKTEGFHMLSRDLILETLQNR 547 The following BLAST results are available for this feature:
BLAST of EWM22873.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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