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Properties
Property Name | Value |
Product | dna-directed rna polymerases and iii subunit rpabc4 |
Orig transcript id | gnl|cribi|Naga_100160g2.4647.mrna |
Orig protein id | gnl|cribi|Naga_100160g2.4647 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002474.1 | supercontig | CM002474.1:3398..5530 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7804 ID=rna7804|Name=rna7804|organism=Nannochloropsis gaditana|type=mRNA|length=1570bp ATGGCGGGTCCCCAGAGCCCGGCGGGAACACGAGACGCACGAGAGGAAAG CGGAGCGGTGAAAGGCCACGAAGACACCAGGGGAGAAAAGGGGAAAGGGA GCTCTGGGCGCGGAGAAGGAGGACTGCAGGGGAACGGAGGTCTCTCGGTG GCGGCGGTGGGAAATTCCCCTTCTCCCACCGCAGGCACGAAGCCGAAGAG CCGGGCAGGACGATGCGATGGAGGCGACGGGCTACGGATGGGGGACCATA TCGGGGGGGGGGATGGCGGCTTGTTACGAGCCGGGAATGCACAAGGCGAA AAGGTGGACGAGACAGGAGACGTCTCCAAGGACAAGGGTTTGGAGGAGCC AGGGGAGAAACAAGAACCCCTGACGGGGTGCGCTGAAATAGCGTCGGCCT CTCCTTCCTCCTCTTCCCCTCCTTCCGGCACTATCTCGAGCTCACACACT CCCCCTGCCGCTTCTCCTTCCTCACTGCCCTCTTCAGAAGGTCTTGACAC CTCATCCACCTCCCTCCCCCGCCCCGTCCGCCGTCCGTCCCTCCGTCTTC CGACTCCTTCCCCTTCTGTGCTTGATGAACTTACCCTCTCCCACTGCCTG GATGCCTACACATCGCGTGAGACGCTCTCTTGTCCATACAAATGCGCATC CTGCGGCGCAACTTCCTCATCCTGCTCCAAGCAATTGACATTACACCGGC TGCCCAACGTTTTCATCTTTCATATGAAACGCTTTGACGCCTTCTCCGCC CGCAAAATTGAGAAGTTCGTCCGGTACCCTCCCAAAGGTCTGAATATGGC CCCTTACATGCACGCGTGGTGCAACGCGGAAATGAGGCGGGAGGGGACAA CGGCGAAAAGGAAGGAAGAAAGTTTGGGGAATGAAAATGGTGGCGACAGG CGTGGGAAAAGGGCTCGTGAAGGGGAAGGCTCCCCTCAAACGGGATGGTC TCATGGACGAAGGGAGGGCATGAACGGCGGATCCGTGAGCCCTGAGATTC TCTATGACCTGTTTGCAGTCGTAGAGCACATGGGGGCCTCCCTTCAGCAA GGGCATTACAAAGCATTCGTACAGGAAGGGACAGAGGGAGGGAAGGAAGG AGGGAGGGAGGGAGGGCGGGCACCGGCCTGGTGCGTTTGCAACGATACTT GGGTCCAGGCGGTGAGCATTGAAAAGGTCTTGAACGCGCAAGCTTACCTC CTGTTTTACATCCGACGGGGTTGGAGCCCAAAGGCAGGCTGAAGGTTACG AAGGGATACGGAAAGGATAGATCGAGAGGGTGAGCTAGGTTGAAGATGAC AAACTGTGCTGGCGATGCAGGAACGGAAGGTGTGTGCTTCTTTCGGTGGT CTTTTGTGAGGGTGGAATGAGGATGGAGGGGGTCAAGTTGCTGAAGTAGT GTACCATATTCGACAAACCAGATGTCACTATAGTGAGTGTCTGAAATAGT GTGAAGCGTTCGACGGGCTAGATGTTACGTAAGGTTAGGAGCTGCAAATG GAAGTGAATCGGATTACTCTAGGGTCTGTTGGGAAAACGAAGTTCAATCG AATCGTCTGTGAAAGATAAT back to topprotein sequence of rna7804 >rna7804-protein ID=rna7804-protein|Name=rna7804|organism=Nannochloropsis gaditana|type=polypeptide|length=160bp MIRKVHIEKQLTSIVVSCVRECHPLLIKTMGSLKRRETGLINRRLSLVQS PVKLCKLHMMSGAGGGPYGHYGSGAGGGVGEGGTTGVGGAMARELSGVTY LCGDCGAQNVIKNKDPIRCRQCNHRIMYKMRTKRQKCLSECVWTAAWRGC DGFSWMIAWL back to topmRNA from alignment at CM002474.1:3398..5530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7804 ID=rna7804|Name=rna7804|organism=Nannochloropsis gaditana|type=mRNA|length=2133bp|location=Sequence derived from alignment at CM002474.1:3398..5530- (Nannochloropsis gaditana) ATGATACGGAAAGTCCACATCGAAAAGCAGCTGACAAGTATTGTCGTGTC
TTGTGTTCGCGAATGTCATCCCTTGCTCATAAAAACAATGGGAAGTCTAA
AGAGAAGGGAGACTGGCCTCATTAGTCGCTTCCATGTTGCAATTGCGAGT
CGTTGGTTTCCTTTCTTTTATGATAGCAGTTTTGTAGTGCCCTCCTTCTC
CCTTTGTGCACATCAAATTGTCATGCGAATCAACGATTTCAAATGATTTA
TTGTCAAATGTTTTTTTGGATCTTTGACACTGCAAGCCAAGGTTGTTGAC
AGCTCAGGTTTCTAAAAGCCCTAATTTATGGTCTTACATATGCATTTGTT
AGAAATCGTGTAAATGTGATTTTTCAGAATTGAAAGGTAGCAGATAACAC
ATAAGAAATGCTATATGTTGACGAATTCATTGCTAAATTTTTTTGAATAA
TTTCATCCGATTATCTTACCACTGCGGGATTCATCACTTTCATCAACATC
CATCTGAAGGCCAACACAATGTACCGCATCTCCCGCTATTCAAGTTTATC
AGCCAAAGCGTACGACATTTAGACAAACCATATGCAACTATCTACCTTAA
TAGTCTGTTGGTGACAATTATTGAAGCTGATATTCCGGAGAGGAAAGAGG
GACGGTGCGGTTTGTCTCGTCGGTCTACACGCGGGTAGCTTTTACATCCC
TTCCTTTATAATCACCGAGTCATATTTTTTGACACAATTTTTTCTCCCTT
CAGTCATTAATCAAGGCATTGCACGTCTTAAACAATCAACGGGACAGTGA
TCCGTGTGCAACTTTATCATCAGCACATTCCCATCGGCAATTATTCAGCA
GTCCTGTATTCTGCCTGTTCGGGATTGTATCATAGTCAGGATCATATCCG
GCAAGATTGCCCAGGTTTGAAGCAAAAACAACCATTTCAACCGCAGTTTT
TGGCAACCCGATGCCATCGAAGCGGGACAAAGGCCTCGCATGCAAATTCG
AAGTTCCTCTGTGGGACTGGCCCATATGAAGTGTTGTCGAGGCAACGTCC
GGCTTGCGGCGTCCGAGGACGGTCAAATGTTTCCGTGAGGCAAAAGCCCG
TTCAGTCTGTCAGGAGTCTTACGGATAGATACCAGAAAGAGTCACGAAAG
GACCTTGCTCGCAGCATGAGATGAATATCACCTTGTCTTTGGGCGTTTTC
CTCGTGCTGTGTGGTTCATTCGGGTTGGGAGGGTCGCGGCTGACGATGAC
CACCTCTTTCTGTCAGAGGGGTACGGAGATGCTATGATAGCAGCCAGGCC
CACACTATCTTCTATGCGTGTCCTCATGCATCTATGCTCTCTTAACACGT
GCAAACCTGAAATCCATCACACTTGCGGGTGCTTACATATTATTTTCTTC
CTACCGTCATCCAAGATAGACGTCTTTCACTCGTGCAATCACCTGTCAAG
CTCTGTAAACTGCATATGATGTCGGGCGCAGGCGGTGGACCTTACGGCCA
TTATGGCTCCGGGGCAGGTGGAGGCGTTGGTGAAGGTGGGACTACCGGCG
TTGGCGGGGCCATGGCGCGGGAGCTAAGCGGCGTGACTTATTTATGCGGA
GGTAAGTGGGAGGCATTGATTGTAGTGGTCATGTGAGGATGATTGGATCA
CATCGAGAAGGGATACTTTAAGACGGTTCATCGCAATTCCTGCTGTCCGC
AACATTCAACTCTGAGACTGGAGGTCTGTGCGTTAAAGCTTGACTGACTT
GTACATCACTGACGCCTGAGAGCAAAGTATACTCCAGTGGCTGACTCCTA
AGTATGTATCGCACATTCAACACGTCTCCCGTCTCTTATCTGTCTCTTAA
CTCGGATAATACAGATTGTGGTGCCCAGAACGTGATAAAAAACAAGGATC
CAATTCGTTGCCGGCAGTGCAACCATAGGATTATGTACAAAATGCGGACG
AAGCGCGTGGTGCAATTTGAAGCCCGATAGGAAAATGGGAGAGGAAGTGA
CAGACAATCAAGCTGCAAAGTTTAATTTTCTGGGGAGACGATATTTGTAC
AGCAAAAATGCCTGAGTGAGTGCGTGTGGACAGCTGCCTGGAGAGGATGC
GATGGCTTCAGTTGGATGATTGCCTGGCTTTAG back to topCoding sequence (CDS) from alignment at CM002474.1:3398..5530- >rna7804 ID=rna7804|Name=rna7804|organism=Nannochloropsis gaditana|type=CDS|length=1932bp|location=Sequence derived from alignment at CM002474.1:3398..5530- (Nannochloropsis gaditana) CAAAAATGCCTGAGTGAGTGCGTGTGGACAGCTGCCTGGAGAGGATGCGA TGGCTTCAGTTGGATGATTGCCTGGCTTTAGATTGTGGTGCCCAGAACGT GATAAAAAACAAGGATCCAATTCGTTGCCGGCAGTGCAACCATAGGATTA TGTACAAAATGCGGACGAAGCGCATAGACGTCTTTCACTCGTGCAATCAC CTGTCAAGCTCTGTAAACTGCATATGATGTCGGGCGCAGGCGGTGGACCT TACGGCCATTATGGCTCCGGGGCAGGTGGAGGCGTTGGTGAAGGTGGGAC TACCGGCGTTGGCGGGGCCATGGCGCGGGAGCTAAGCGGCGTGACTTATT TATGCGGAGATGATACGGAAAGTCCACATCGAAAAGCAGCTGACAAGTAT TGTCGTGTCTTGTGTTCGCGAATGTCATCCCTTGCTCATAAAAACAATGG GAAGTCTAAAGAGAAGGGAGACTGGCCTCATTACAAAAATGCCTGAGTGA GTGCGTGTGGACAGCTGCCTGGAGAGGATGCGATGGCTTCAGTTGGATGA TTGCCTGGCTTTAGATTGTGGTGCCCAGAACGTGATAAAAAACAAGGATC CAATTCGTTGCCGGCAGTGCAACCATAGGATTATGTACAAAATGCGGACG AAGCGCATAGACGTCTTTCACTCGTGCAATCACCTGTCAAGCTCTGTAAA CTGCATATGATGTCGGGCGCAGGCGGTGGACCTTACGGCCATTATGGCTC CGGGGCAGGTGGAGGCGTTGGTGAAGGTGGGACTACCGGCGTTGGCGGGG CCATGGCGCGGGAGCTAAGCGGCGTGACTTATTTATGCGGAGATGATACG GAAAGTCCACATCGAAAAGCAGCTGACAAGTATTGTCGTGTCTTGTGTTC GCGAATGTCATCCCTTGCTCATAAAAACAATGGGAAGTCTAAAGAGAAGG GAGACTGGCCTCATTACAAAAATGCCTGAGTGAGTGCGTGTGGACAGCTG CCTGGAGAGGATGCGATGGCTTCAGTTGGATGATTGCCTGGCTTTAGATT GTGGTGCCCAGAACGTGATAAAAAACAAGGATCCAATTCGTTGCCGGCAG TGCAACCATAGGATTATGTACAAAATGCGGACGAAGCGCATAGACGTCTT TCACTCGTGCAATCACCTGTCAAGCTCTGTAAACTGCATATGATGTCGGG CGCAGGCGGTGGACCTTACGGCCATTATGGCTCCGGGGCAGGTGGAGGCG TTGGTGAAGGTGGGACTACCGGCGTTGGCGGGGCCATGGCGCGGGAGCTA AGCGGCGTGACTTATTTATGCGGAGATGATACGGAAAGTCCACATCGAAA AGCAGCTGACAAGTATTGTCGTGTCTTGTGTTCGCGAATGTCATCCCTTG CTCATAAAAACAATGGGAAGTCTAAAGAGAAGGGAGACTGGCCTCATTAC AAAAATGCCTGAGTGAGTGCGTGTGGACAGCTGCCTGGAGAGGATGCGAT GGCTTCAGTTGGATGATTGCCTGGCTTTAGATTGTGGTGCCCAGAACGTG ATAAAAAACAAGGATCCAATTCGTTGCCGGCAGTGCAACCATAGGATTAT GTACAAAATGCGGACGAAGCGCATAGACGTCTTTCACTCGTGCAATCACC TGTCAAGCTCTGTAAACTGCATATGATGTCGGGCGCAGGCGGTGGACCTT ACGGCCATTATGGCTCCGGGGCAGGTGGAGGCGTTGGTGAAGGTGGGACT ACCGGCGTTGGCGGGGCCATGGCGCGGGAGCTAAGCGGCGTGACTTATTT ATGCGGAGATGATACGGAAAGTCCACATCGAAAAGCAGCTGACAAGTATT GTCGTGTCTTGTGTTCGCGAATGTCATCCCTTGCTCATAAAAACAATGGG AAGTCTAAAGAGAAGGGAGACTGGCCTCATTA back to top
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