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Properties
Property Name | Value |
Product | ubiquitin carboxyl-terminal hydrolase 31 |
Orig transcript id | gnl|cribi|Naga_100160g1.4644.mrna |
Orig protein id | gnl|cribi|Naga_100160g1.4644 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002474.1 | supercontig | CM002474.1:1752..3321 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7803 ID=rna7803|Name=rna7803|organism=Nannochloropsis gaditana|type=mRNA|length=471bp ATGACCTACTGGGGGATAATAACGCCCGGAAAGGACTCTAAGCGCAGCGG CTTGCCTCCTCCAAGCCCTCGGAGAGGAGACGATCTTCCCATTGTCTACA GTCCGAAAAGAGGACAACCGAGCACACATGACAATCTGATAGGGGGAGAG ATGACCTCAATGAACCGTCTTTGCAGTCTTTTTCAGAGGTCAGACTCGAA TTTATCTGAGGCCTCTGACGTGCAAACTTTGCGGAGAGAAAAAAAGTGGC TTCACGTAGTCCTACGGAAGTTCGAATCATCTTTTCGCGAACAATACGGC AGACGCATTCTCACTGCGAAAGACATTGCGCCTGTTGAAAAGCAGTATGA GCGTTACATACACATTAAAAGCAAGCTGGCGACACTCGCATCGATGGAAA AGAGCGAGGAAATCAGCGAACAGAAGGAAACGATAAAGTCTCGGAATATT CTGAATACTTCCCACGAGTAA back to topprotein sequence of rna7803 >rna7803-protein ID=rna7803-protein|Name=rna7803|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp MAGPQSPAGTRDAREESGAVKGHEDTRGEKGKGSSGRGEGGLQGNGGLSV AAVGNSPSPTAGTKPKSRAGRCDGGDGLRMGDHIGGGDGGLLRAGNAQGE KVDETGDVSKDKGLEEPGEKQEPLTGCAEIASASPSSSSPPSGTISSSHT PPAASPSSLPSSEGLDTSSTSLPRPVRRPSLRLPTPSPSVLDELTLSHCL DAYTSRETLSCPYKCASCGATSSSCSKQLTLHRLPNVFIFHMKRFDAFSA RKIEKFVRYPPKGLNMAPYMHAWCNAEMRREGTTAKRKEESLGNENGGDR RGKRAREGEGSPQTGWSHGRREGMNGGSVSPEILYDLFAVVEHMGASLQQ GHYKAFVQEGTEGGKEGGREGGRAPAWCVCNDTWVQAVSIEKVLNAQAYL LFYIRRGWSPKAG back to topmRNA from alignment at CM002474.1:1752..3321+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7803 ID=rna7803|Name=rna7803|organism=Nannochloropsis gaditana|type=mRNA|length=1570bp|location=Sequence derived from alignment at CM002474.1:1752..3321+ (Nannochloropsis gaditana) ATGGCGGGTCCCCAGAGCCCGGCGGGAACACGAGACGCacgagaggaaag
cggagcGGTGAAAGGCCACGAAGACAccaggggagaaaaggggaaaggga
gctctgggcgcggagaaggaggactgCAGGGGAACGGAGGTCTctcggtg
gcggcggtgggaaattccccttctcccaccgcAGGCACGAAGCCGAAGAG
CCGGGCAGGACGATgcgatggaggcgacgggCTACGGATGGGGGACCAta
tcggggggggggatggcggctTGTTACGAGCCGGGAATGCACAAGGCGAA
AAGGTGGACGAGACAGGAGACGTCTCCAAGGACAAGGGTTTGGAGGAGCC
AGGGGAGAAACAAGAACCCCTGACGGGGTGCGCTGAAATAGCGtcggcct
ctccttcctcctcttcccctccttccggcaCTATCTCGAGCTCACACACT
CCCCCtgccgcttctccttcctcactgCCCTCTTCAGAAGGTCTTGACac
ctcatccacctccctcccccgccccgtccgccgtccgtccctccgtcttc
cgactccttccccttctgtGCTTGATGAACTTACCCTCTCCCACTGCCTG
GATGCCTACACATCGCGTGAGACGCTCTCTTGTCCATACAAATGCGCATC
CTGCGGCGCAACTTCCTCATCCTGCTCCAAGCAATTGACATTACACCGGC
TGCCCAACGTTTTCATCTTTCATATGAAACGCTTTgacgccttctccgcc
cgcaAAATTGAGAAGTTCGTCCGGTACCCTCCCAAAGGTCTGAATATGGC
CCCTTACATGCACGCGTGGTGCAACGCGGAAatgaggcgggaggggacaa
cggcgaaaaggaaggaagaaagttTGGGGAATGAAAATGGTGGCGACAGG
CGTGGGAAAAGGGCTCgtgaaggggaaggctcCCCTCAAACGGGATGGTC
TCatggacgaagggagggcatgaaCGGCGGATCCGTGAGCCCTGAGATTC
TCTATGACCTGTTTGCAGTCGTAGAGCACATGGGGGCCTCCCTTCAGCAA
GGGCATTACAAAGCATTCGTacaggaagggacagagggagggaaggaagg
agggagggagggagggcgggcaccggCCTGGTGCGTTTGCAACGATACTT
GGGTCCAGGCGGTGAGCATTGAAAAGGTCTTGAACGCGCAAGCTTACCTC
CTGTTTTACATCCGACGGGGTTGGAGCCCAAAGGCAGGCTGAAGGTTACG
AAGGGATACGGAAAGGATAGATCGAGAGGGTGAGCTAGGTTGAAGATGAC
AAACTGTGCTGGCGATGCAGGAACGGAAGGTGTGTGCTTCTTTCGGTGGT
CTTTTGTGAGGGTGgaatgaggatggagggggtcAAGTTGCTGAAGTAGT
GTACCATATTCGACAAACCAGATGTCACTATAGTGAGTGTCTGAAATAGT
GTGAAGCGTTCGACGGGCTAGATGTTACGTAAGGTTAGGAGCTGCAAATG
GAAGTGAATCGGATTACTCTAGGGTCTGTTGGGAAAACGAAGTTCAATCG
AATCGTCTGTGAAAGATAAT back to topCoding sequence (CDS) from alignment at CM002474.1:1752..3321+ >rna7803 ID=rna7803|Name=rna7803|organism=Nannochloropsis gaditana|type=CDS|length=1242bp|location=Sequence derived from alignment at CM002474.1:1752..3321+ (Nannochloropsis gaditana) ATGGCGGGTCCCCAGAGCCCGGCGGGAACACGAGACGCacgagaggaaag cggagcGGTGAAAGGCCACGAAGACAccaggggagaaaaggggaaaggga gctctgggcgcggagaaggaggactgCAGGGGAACGGAGGTCTctcggtg gcggcggtgggaaattccccttctcccaccgcAGGCACGAAGCCGAAGAG CCGGGCAGGACGATgcgatggaggcgacgggCTACGGATGGGGGACCAta tcggggggggggatggcggctTGTTACGAGCCGGGAATGCACAAGGCGAA AAGGTGGACGAGACAGGAGACGTCTCCAAGGACAAGGGTTTGGAGGAGCC AGGGGAGAAACAAGAACCCCTGACGGGGTGCGCTGAAATAGCGtcggcct ctccttcctcctcttcccctccttccggcaCTATCTCGAGCTCACACACT CCCCCtgccgcttctccttcctcactgCCCTCTTCAGAAGGTCTTGACac ctcatccacctccctcccccgccccgtccgccgtccgtccctccgtcttc cgactccttccccttctgtGCTTGATGAACTTACCCTCTCCCACTGCCTG GATGCCTACACATCGCGTGAGACGCTCTCTTGTCCATACAAATGCGCATC CTGCGGCGCAACTTCCTCATCCTGCTCCAAGCAATTGACATTACACCGGC TGCCCAACGTTTTCATCTTTCATATGAAACGCTTTgacgccttctccgcc cgcaAAATTGAGAAGTTCGTCCGGTACCCTCCCAAAGGTCTGAATATGGC CCCTTACATGCACGCGTGGTGCAACGCGGAAatgaggcgggaggggacaa cggcgaaaaggaaggaagaaagttTGGGGAATGAAAATGGTGGCGACAGG CGTGGGAAAAGGGCTCgtgaaggggaaggctcCCCTCAAACGGGATGGTC TCatggacgaagggagggcatgaaCGGCGGATCCGTGAGCCCTGAGATTC TCTATGACCTGTTTGCAGTCGTAGAGCACATGGGGGCCTCCCTTCAGCAA GGGCATTACAAAGCATTCGTacaggaagggacagagggagggaaggaagg agggagggagggagggcgggcaccggCCTGGTGCGTTTGCAACGATACTT GGGTCCAGGCGGTGAGCATTGAAAAGGTCTTGAACGCGCAAGCTTACCTC CTGTTTTACATCCGACGGGGTTGGAGCCCAAAGGCAGGCTGA back to top
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