EWM22958.1, cds7715 (CDS) Nannochloropsis gaditana

Overview
NameEWM22958.1
Unique Namecds7715
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:198265..198628 +
Alignment locationCM002473.1:198713..199012 +
Alignment locationCM002473.1:199198..199682 +
Alignment locationCM002473.1:199818..200045 +
Alignment locationCM002473.1:200256..200558 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22958.1
Productmalate synthase
Orig transcript idgnl|cribi|Naga_100102g16.69.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:198265..198628 +
CM002473.1supercontigCM002473.1:198713..199012 +
CM002473.1supercontigCM002473.1:199198..199682 +
CM002473.1supercontigCM002473.1:199818..200045 +
CM002473.1supercontigCM002473.1:200256..200558 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0005975carbohydrate metabolic process
GO:0006097glyoxylate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003824catalytic activity
GO:0004474malate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR011076Malate_synth-like
IPR001465Malate_synthase
IPR006252Malate_synthA
Homology
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|585103691|gb|EWM22958.1| (malate synthase [Nannochloropsis gaditana])

HSP 1 Score: 1154.81 bits (2986), Expect = 0.000e+0
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0
Query:    1 MNTASASAVRGLEPNSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTTGALSRL 559
            MNTASASAVRGLEPNSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTTGALSRL
Sbjct:    1 MNTASASAVRGLEPNSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTTGALSRL 559          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|224003683|ref|XP_002291513.1| (probable malate synthase [Thalassiosira pseudonana CCMP1335] >gi|220973289|gb|EED91620.1| probable malate synthase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 299/548 (54.56%), Postives = 372/548 (67.88%), Query Frame = 0
Query:   12 LEPNSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRD-DPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMT-SPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRP--LAVPITAEDLLRL---PSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDT 552
            +E  S   ++     +    + +L+P  LR  + +L  +FE RRQ LL  R  KA+E D G LPHF  +  S    DP WRCA IP D+ DRRVEITGPVDRKMVINGLNSGA VYMADFEDS+SPTW N+  GQ NLRDA RG I YT      R+Y LKEKTA LFVRPRG HLDEAHVTV G   +  LFD A+Y ++N   L+  G  PY Y+PK+E+++EAR WNDVF   +   G+P  TIRAT L+ET+TAAF+MEEILYELR+HSLGLNCGRWDY FSYIK+ K     I PDR +LTMT +P +++YV  LI+ICHKRGTFAMGGMAAQIPI+      EAA+  +  DK+RE LAGHDGTWVAHP L+ LA  +FD++MPT NQI D  P      +T  DLLRL   P   + T  GL++ + +VL YT+AWL+GIGCIPL++ MEDAATAEISR Q+ QW  H VK +D   +V++ S I  L+ +EV+    R +  ED+    L   + E  +L K  L +FLT+VCY +I+ T
Sbjct:    1 MEARSPTVQIEVHAPICAAASEILTPDSLR-FVGYLCNKFEDRRQALLNARKSKAMEFDSGGLPHFEKSDGSGSGGDPHWRCASIPGDVMDRRVEITGPVDRKMVINGLNSGANVYMADFEDSTSPTWSNLTEGQRNLRDATRGKITYTNKQT-GRVYALKEKTAVLFVRPRGWHLDEAHVTVNGRVASGSLFDFALYFYHNVHCLLQKGSRPYFYLPKLEHYLEARLWNDVFKAAQSYFGVPYGTIRATVLLETITAAFQMEEILYELRDHSLGLNCGRWDYLFSYIKKFKCHDDKIAPDRSHLTMTDTPLLKSYVDRLIYICHKRGTFAMGGMAAQIPIKGDPAANEAAMARIEKDKIREALAGHDGTWVAHPALVSLAKAVFDRYMPTPNQI-DKNPGLTGKDVTEADLLRLQLVPKGTAITSTGLQKGVSIVLAYTEAWLRGIGCIPLNHHMEDAATAEISRAQIWQWKYHGVKTEDDG-IVISASRISKLVHDEVK----RCSGGEDRGKWFLAGKLVED-MLTKDRLDDFLTTVCYPHILTT 539          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|384486618|gb|EIE78798.1| (malate synthase A [Rhizopus delemar RA 99-880])

HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0
Identity = 289/546 (52.93%), Postives = 374/546 (68.50%), Query Frame = 0
Query:   16 SSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKE--KTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSR------ATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTT 553
            SS+  V  L  +T  +A +LSP  L+  +A L   F P R+ L+ +R+ +  E+D GVLP+F P T  IR DP WR A     +QDRRVEITGPVDRKMVIN LNSGA  +MADFEDSS+PTWENMI+GQ+NLRDAVR TI +  P   K  YQL++  K ATL VRPRG H+ E HV + GEP AAG+FD A++ F+NA+ LV  G+GPY Y+PKIE H+EAR WND+F+  + ++ +P  TIR T LIET+ AA+EM+EI+YELREHS GLNCGRWDY FS+IK+L+  P Y+ PDR  +TMT PFM AYV  LI  CHKRG  AMGGMAAQIPI+      EAA+  VR DK+REV AGHDGTWVAHP L+ LAL++FD++MP  NQIH VR   V ++A DLL +   G+ T  G+R+NI V L Y ++WL+G GC+P+ N MEDAATAEISR Q++QW RH+ + D+    V+T   +  +L EE +K+++R      ++ YE  + +       EH+        +FLT++ Y  I   T
Sbjct:   13 SSVPGVAILAPVTAMEAEILSPQALQ-FVATLQRIFNPTRKTLMQKRAIRQQELDRGVLPNFLPETAYIRQDPHWRAAVPAPGLQDRRVEITGPVDRKMVINALNSGASTFMADFEDSSAPTWENMISGQVNLRDAVRQTITFANPSGKK--YQLRKDGKLATLIVRPRGWHMVEKHVIIDGEPCAAGIFDFALFFFHNAKELVKNGKGPYFYLPKIESHLEARLWNDIFNVAQDMVNIPRGTIRGTVLIETILAAYEMDEIIYELREHSSGLNCGRWDYIFSFIKKLRQHPDYVLPDRSAVTMTVPFMDAYVRLLIQTCHKRGVHAMGGMAAQIPIKEDAKANEAAMAKVRQDKIREVTAGHDGTWVAHPALVKLALEVFDEYMPQPNQIH-VRREDVHVSAVDLLNVHFKGAITDKGIRDNIQVGLAYMESWLRGTGCVPIMNLMEDAATAEISRSQLYQWARHKARTDEGK--VITGDYLLKVLDEETEKIKNRLGSKYASSKYEAAKRIFATNITGEHY-------DDFLTTMLYDDITTIT 545          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|672824576|gb|KFH69468.1| (malate synthase, glyoxysomal [Mortierella verticillata NRRL 6337])

HSP 1 Score: 577.015 bits (1486), Expect = 0.000e+0
Identity = 289/549 (52.64%), Postives = 375/549 (68.31%), Query Frame = 0
Query:   15 NSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKR----ALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTTGALSRL 559
            +S +  +  L  +TP QA +L+P E+ + +A LH  +EP RQ LL  R ++ +E+D G LP F P T+SIR+D  WR A     +QDRRVEITGPVDRKMVIN LNSGA  +MADFEDS++PTWEN INGQ NL+DA+   I YTAP+  +   +   K ATL VRPRG HLDE HV V G+ V+  LFD A+Y F+NAR  +++G GPY Y+PK+E H+EAR WNDVF+  +  +GLP  TIRATALIET+  AFEM+EI+YELREHS GLNCGRWDY FS+IK+L+ +P ++ PDR  ++MT+PFM AYV  LI  CHKRG  AMGGMAAQIPI++     +AA++ V  DKLREV AGHDGTWVAHP L+ LALK+F++HMP  NQ+H +R   V +TA DLL     G+ T  G+R N+ V L Y +AWL+G+GC+P+HN MEDAATAEISR Q+ QW +H  +  D    VVTP  +  +L EE   L   A S  ++R     +   +A     +  + Y  +FLTS+ Y  IV+     +R+
Sbjct:    4 DSKVPGLTILAKVTPAQAEILTP-EVLQFVATLHRTYEPTRQALLQRRQQRQIELDNGRLPDFLPETRSIREDATWRAAKPAPGLQDRRVEITGPVDRKMVINALNSGAATFMADFEDSNAPTWENNINGQTNLKDAIHQRISYTAPNGKQYNIRKDGKVATLIVRPRGWHLDEKHVLVDGQIVSGSLFDFALYFFHNARKSIEIGIGPYFYVPKMESHLEARLWNDVFNTAQDYIGLPRGTIRATALIETILGAFEMDEIIYELREHSAGLNCGRWDYIFSFIKKLRQNPDFVLPDRSDISMTTPFMDAYVRLLIKTCHKRGVHAMGGMAAQIPIKNNEAANKAAMDKVHNDKLREVKAGHDGTWVAHPDLVKLALKVFNEHMPQPNQLH-IRRDDVHVTASDLLNTDVKGAITEAGIRANVSVSLIYMEAWLRGLGCVPIHNLMEDAATAEISRSQLWQWAKHGARTIDGT--VVTPKYLLKVLDEETNLL---AQSMGEQRFQASKMTQAKAYLATQITGQDY-SDFLTSLLYNDIVELEKLQARI 544          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|219118921|ref|XP_002180227.1| (malate synthase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408484|gb|EEC48418.1| malate synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 575.474 bits (1482), Expect = 0.000e+0
Identity = 296/547 (54.11%), Postives = 366/547 (66.91%), Query Frame = 0
Query:   12 LEPNSSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHF-SPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRP--LAVPITAEDLLRL---PSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDT 552
            +E  S    VR           +L+P  LR +L  L   F+ RRQ LL  R   A   D G +PHF S      + DP WRCAP+P D+QDRRVEITGPVDRKMVINGLNSGA VYMADFEDS+SPTW N+I+GQ+NLRDAVRGTI +T         Q   + ATLFVRPRG HLDEAHVTV G+  +  LFD A+Y F+N  +L + G GPY Y+PK+E H EA  WNDVF   +Q MG+P  TIRAT L+ET+TAAFEMEEILYELR+HSLGLNCGRWDY FS+IK+ K     +TPDR +LTMT+P M+AYV  LI+ICHKRGTFAMGGM+A IPI++     +AA++ V  DKLREV AGHDG+WVAHP L+ +A  +FD+HM T NQI   +P  +   I  +DLLRL   P   + T  GL   + +VL YT+AWL+GIGCIPLHN MEDAATAEISR Q+ QW   +    D     +T S +  L+ +EV + +    + + K    L   + E+ +L+K  L +FLTSVCY +IV T
Sbjct:    2 IEFRSEQVHVRVHAPANKAAEEMLTPDALR-LLGLLCERFDVRRQALLAARKTHATSFDAGDVPHFLSAEDHPAQRDPHWRCAPVPDDVQDRRVEITGPVDRKMVINGLNSGACVYMADFEDSTSPTWFNVIDGQLNLRDAVRGTIAFTNAAGKVYTVQHASRPATLFVRPRGWHLDEAHVTVNGKVASGSLFDFAMYFFHNVHHLKEKGTGPYFYLPKLESHKEAALWNDVFVAAQQFMGVPIGTIRATVLLETITAAFEMEEILYELRDHSLGLNCGRWDYLFSFIKKFKHHTDKLTPDRNHLTMTTPLMEAYVKRLIYICHKRGTFAMGGMSASIPIKNDPAANDAAMQKVADDKLREVTAGHDGSWVAHPALVKVAKDVFDEHMLTPNQITS-KPGYVGSSINEQDLLRLPPIPHGKAITSEGLARGVGIVLAYTEAWLRGIGCIPLHNAMEDAATAEISRAQIWQWRSQKASTQDD-NRPITASRVAALVQQEVDR-QCNGVAGKSKGKWRLAGNLVEN-MLNKDELDDFLTSVCYPHIVTT 543          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|299117533|emb|CBN75377.1| (Malate synthase [Ectocarpus siliculosus])

HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0
Identity = 285/514 (55.45%), Postives = 357/514 (69.46%), Query Frame = 0
Query:   42 RILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKE--KTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIVDTT 553
            R L  LH  FE RRQ LL  R  +  E D GVLP F P T+ +RDDP WR A  P D+ DRRVEITGPVDRKMVINGLNSGA  YMADFEDSS+PTW NM+ GQ+NLRDA R  I Y +PD  K  Y L +  K A L VRPRG HLDEAHVT+ G P++  LFD  +Y F+N   L+  G GPY Y+ K+E H+EAR WNDVF   ++++G+P  TIRATAL+ET+TAAFEMEE+LYELR+HS GLNCGRWDY FSYIK+++A    +TP+RK+LTM +PFM+AYV  LI  CH RG FAMGGMAAQIP+++    A  ALESV+ DKLREV AGHDGTWVAHP L+ +A++IF++HMP  NQ+  V   +V  +A+DLLR P  G  T +GL EN+ V + Y ++WL+G GCIP++ KMEDAATAEISR QV QW+ H     D  E  +TP L++ +      KL S A+  +      L   +  + ++    L +FLTSV Y +IV+ +
Sbjct:   24 RFLGVLHQNFEQRRQQLLRARETRQKEFDAGVLPDFLPETRHVRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMVEGQLNLRDAARRDISYVSPDTGKH-YGLTKGAKLAVLLVRPRGWHLDEAHVTIDGRPLSGALFDFGLYFFHNVFALMKRGTGPYFYVAKLESHLEARLWNDVFVLAQKLLGVPVGTIRATALLETITAAFEMEEMLYELRDHSSGLNCGRWDYIFSYIKKMRAHADKVTPERKFLTMEAPFMEAYVQLLIRTCHSRGAFAMGGMAAQIPVKNNPKLAAQALESVKKDKLREVKAGHDGTWVAHPALVTVAMEIFNEHMPQPNQLSFVPECSV--SAQDLLRTPDGGEITQHGLEENVEVCIFYVESWLRGNGCIPVNFKMEDAATAEISRAQVWQWVHHGASTSDGIE--ITPRLVQDIAERATHKLLS-ASGGDGGGKFRLAGRLTAN-MMTAPELDDFLTSVAYPHIVNIS 530          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|1173954984|gb|OQS02073.1| (malate synthase [Thraustotheca clavata])

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 294/533 (55.16%), Postives = 363/533 (68.11%), Query Frame = 0
Query:   18 LAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIV 550
            ++ VR LG +T E   +L+P  LR  LAFLH  FE RRQ LL  R  +   +D GV P F P TK +R+  EW+ A IP D+ DRRVEITGPVDRKMVINGLNSGAK YMADFEDS+SP W  +++GQINL+DAVR TI YT P + K+ Y L   TATL VRPRG HLDEAHVTV G+ ++  LFD  +Y F+NAR L     G Y Y+PK+E H+EAR WNDVF   +  +G+P  TIRAT LIET+ A FEMEEIL+EL+EHS GLNCGRWDY FSYIK+ +  P ++ PDR  + MT+PFM +YV  LI+ CH+RG  AMGGMAAQIP+++        + +V+ DKLRE  AGHDGTWVAHPGL+ +A+ +F+Q MPT NQI  +      +TA DL+ +P  G+ +  GL ENI V L YT+AWL+G GCIPLHNKMEDAATAEISRVQV QWLRH     D    V+T  L+  +L+   QK R+ AT   +K  LA    I  + L    +   FLT  CY +IV
Sbjct:    1 MSNVRVLGHVTKEFQDILTPDALR-FLAFLHENFESRRQALLRARCERQRALDNGVFPTFLPETKYVRES-EWKVASIPADLADRRVEITGPVDRKMVINGLNSGAKCYMADFEDSTSPVWHTLVSGQINLKDAVRKTISYTQPGSGKK-YSLNATTATLLVRPRGWHLDEAHVTVNGQILSGSLFDFGLYFFHNARELALRNSGAYFYLPKLESHLEARLWNDVFVAAQNYLGIPTGTIRATVLIETILAVFEMEEILFELKEHSSGLNCGRWDYIFSYIKKFRNHPEFVLPDRAEIGMTTPFMASYVKLLINTCHRRGAHAMGGMAAQIPVKNDPALNAKFMGAVKEDKLREANAGHDGTWVAHPGLVSIAMDVFNQVMPTPNQISRIPEEGKFVTAADLIAIPK-GNISYTGLEENIDVSLVYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHNRSTSDGK--VITKQLVLDILASCTQK-RAAATKGANKYQLA--HDILVNVLTGDKF-EAFLTLPCYPHIV 523          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|669156336|ref|XP_008613730.1| (malate synthase A [Saprolegnia diclina VS20] >gi|530734802|gb|EQC33044.1| malate synthase A [Saprolegnia diclina VS20])

HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0
Identity = 289/532 (54.32%), Postives = 360/532 (67.67%), Query Frame = 0
Query:   19 AEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKEKTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSRATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIV 550
            + VR LG +T E   +L+P  LR  LAFLH  FE RRQ LL  R ++  ++D GV P F P TK +R+  +W+ A IP D++DRRVEITGPVDRKMVINGLNSGAK YMADFEDS+SP W  +++GQINL+DAVR TI YT  +N K+ Y L   TATL VRPRG HLDEAHVTV  + ++  LFD  +Y F+NAR L   G G Y Y+PK+E H+EAR WNDVF   +  +G+P  TIRAT LIET+ A FEM+EIL+EL++HS GLNCGRWDY FS+IK+ +    ++ PDR  + MT+PFM +YV  LIH CH+RG  AMGGMAAQIP+++     +  + +VR DKLRE  AGHDGTWVAHPGL+ +AL +F+Q MPT +QI  V      +TA DL+ +P+ G S   GL ENI V LEYT+AWL+G GCIPLHNKMEDAATAEISRVQV QWLRH     D     +T  L+  +L+   QK   R T  +      L   +    L    +   FLT  CY +IV
Sbjct:    5 SNVRVLGHVTKEFQDILTPDALR-FLAFLHENFETRRQSLLHARCQRQRDLDAGVFPSFLPETKYVRES-DWKVASIPKDLEDRRVEITGPVDRKMVINGLNSGAKCYMADFEDSTSPVWHTLVSGQINLKDAVRRTISYTQGNNGKK-YALNASTATLLVRPRGWHLDEAHVTVNNQILSGSLFDFGLYFFHNARELALRGSGAYFYLPKLESHLEARLWNDVFVAAQSYLGIPNGTIRATVLIETILAVFEMDEILFELKDHSSGLNCGRWDYIFSFIKKFRNHASFVLPDRSEIGMTTPFMASYVKLLIHTCHRRGAHAMGGMAAQIPVKNDPALNDKFMAAVREDKLREANAGHDGTWVAHPGLVKIALDVFNQVMPTPHQIAKVAEAGKHVTAADLIAVPTGGIS-YTGLEENIDVSLEYTEAWLRGNGCIPLHNKMEDAATAEISRVQVWQWLRHGKSTKDGKR--ITKELVLSILAACTQK---RVTQAKAGNKYQLAHDVLVDVLTSDKF-EAFLTLPCYPHIV 526          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|1183478652|gb|ORZ02491.1| (malate synthase A [Syncephalastrum racemosum])

HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0
Identity = 283/533 (53.10%), Postives = 366/533 (68.67%), Query Frame = 0
Query:   21 VRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKE--KTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSR-ATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIV 550
            V  LG +T +QA +L+P  L   LA L   F P R+ L+  R  +  E+D GVLP+F P T  IR+DP WR AP    +QDRRVEITGPVDRKMVIN LNSGAK +MADFEDSSSPTWENMI+GQ+NLRDAVR  I +T P+  K  Y+L++  K A L VRPRG H+ E HV V GEP++A +FD A+Y F+NA+ L+  G+GPY Y+PK+E H+EAR WND+F+  + ++ +P  TIR T LIET+ AAFEM+EI+YELR+HS GLNCGRWDY FS+IKRL+  P ++ PDR  +TMT PFM AYV  LI  CHKRG  AMGGMAAQIPI++     +AA++ V ADKLREV AGHDGTW+AHP L  +A ++F++HMPT NQIH VR   V +   DLL +   G+ T NG+R NI V L Y +AWL+G+GC+PL+  MEDAATAEISR Q+ QW +H  +  D  E  ++   +  +L EE  K++ +    Y   +     +A   +   +K    EFLT++ Y  +V
Sbjct:   17 VTVLGAVTAQQAEILTPEALL-FLATLQRIFNPTRKTLMQRRVYRQQELDRGVLPNFLPETAYIREDPNWRAAPPAPGLQDRRVEITGPVDRKMVINALNSGAKTFMADFEDSSSPTWENMISGQVNLRDAVREQIAFTNPNGKK--YELRKDGKAAVLLVRPRGWHMVEKHVLVDGEPMSASIFDFALYFFHNAKELIKRGKGPYFYLPKMESHLEARLWNDIFNVAQDMINIPRGTIRGTVLIETIMAAFEMDEIIYELRDHSAGLNCGRWDYIFSFIKRLRQYPEFVLPDRSQVTMTVPFMDAYVRLLIQTCHKRGVHAMGGMAAQIPIKNDQQANKAAMDKVYADKLREVKAGHDGTWIAHPDLAKIAFEVFNEHMPTPNQIH-VRREDVQVKNTDLLDINFKGAITENGIRSNIQVGLGYMEAWLRGVGCVPLNYMMEDAATAEISRSQLWQWAKHHARTSDGKE--ISGQYLLQILDEETDKIKKQLGAKYASSKYEQAKKAFATNVTGEK--YDEFLTTLLYDEVV 541          
BLAST of EWM22958.1 vs. NCBI_GenBank
Match: gi|384495450|gb|EIE85941.1| (malate synthase A [Rhizopus delemar RA 99-880])

HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0
Identity = 285/538 (52.97%), Postives = 372/538 (69.14%), Query Frame = 0
Query:   16 SSLAEVRYLGTLTPEQAALLSPPELRRILAFLHYEFEPRRQGLLLERSRKALEIDGGVLPHFSPATKSIRDDPEWRCAPIPTDIQDRRVEITGPVDRKMVINGLNSGAKVYMADFEDSSSPTWENMINGQINLRDAVRGTIVYTAPDNPKRIYQLKE--KTATLFVRPRGLHLDEAHVTVGGEPVAAGLFDLAVYLFYNARNLVDLGRGPYLYIPKIEYHVEARWWNDVFSCIEQIMGLPGRTIRATALIETLTAAFEMEEILYELREHSLGLNCGRWDYAFSYIKRLKASPHYITPDRKYLTMTSPFMQAYVTTLIHICHKRGTFAMGGMAAQIPIRSGGNEAEAALESVRADKLREVLAGHDGTWVAHPGLIPLALKIFDQHMPTKNQIHDVRPLAVPITAEDLLRLPSAGSSTLNGLRENIFVVLEYTKAWLKGIGCIPLHNKMEDAATAEISRVQVHQWLRHEVKLDDQPELVVTPSLIKVLLSEEVQKLRSR-ATSYEDKRALALCRAICEHFLLDKSYLPEFLTSVCYRYIV 550
            SS   V  L  +T  ++ +LS   L+  +A L   F P R+ LL +R+ +  E+D GVLP F P T  +R+DP WR AP    +QDRRVEITGPVDRKMVIN LNSGA  +MADFEDSS+PTWENMI+GQ+NLRDAVR TI +       + Y+L++  K ATL VRPRG H+ E HV V GEP AAG+FD  +Y F+NA+ L+  G+GPY Y+PK+E H+EAR WND+F+  + ++ +P  TIR T LIET+ AA+EM+EI+YELREHS GLNCGRWDY FS+IK+L+  P Y+ PDR  +TMT PFM AYV  LI  CHKRG  AMGGMAAQIPI+      EAA+  V+ DKLREV AGHDGTWVAHP L+ LAL +F++HMP  NQIH VR   V +T+ DLL +   G+ T  G+R+NI + L Y ++WL+G+GC+P+ N MEDAATAEISR Q+HQW RH+ +  D+ +++    L+KV L EE +K+++R  + Y   +  A  R    +   D+    +FLT++ Y  IV
Sbjct:   13 SSAPGVAVLAPVTSAESEILSTEALQ-FVATLQRIFNPTRKTLLQKRALRQQELDRGVLPDFLPETAHVRNDPNWRAAPPAPGLQDRRVEITGPVDRKMVINALNSGAYTFMADFEDSSAPTWENMISGQVNLRDAVRKTITFA---QSGKKYELRKDGKLATLIVRPRGWHMVEKHVIVDGEPCAAGIFDFGLYFFHNAKELIKQGKGPYFYLPKMESHLEARLWNDIFNVAQDMINIPRGTIRGTVLIETILAAYEMDEIIYELREHSSGLNCGRWDYIFSFIKKLRQHPEYVLPDRSAVTMTVPFMDAYVRLLIQTCHKRGVHAMGGMAAQIPIKDDVKANEAAMAKVQQDKLREVTAGHDGTWVAHPALVKLALDVFNEHMPQPNQIH-VRREDVTVTSVDLLNVNFKGAITEKGIRDNIQIGLAYMESWLRGVGCVPIMNLMEDAATAEISRSQLHQWARHQART-DEGKIITGDYLLKV-LDEETEKIKNRLGSKYAASKYEAAKRIFSTNITGDQ--YDDFLTTMLYDDIV 541          
The following BLAST results are available for this feature:
BLAST of EWM22958.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103691|gb|EWM22958.1|0.000e+0100.00malate synthase [Nannochloropsis gaditana][more]
gi|224003683|ref|XP_002291513.1|0.000e+054.56probable malate synthase [Thalassiosira pseudonana... [more]
gi|384486618|gb|EIE78798.1|0.000e+052.93malate synthase A [Rhizopus delemar RA 99-880][more]
gi|672824576|gb|KFH69468.1|0.000e+052.64malate synthase, glyoxysomal [Mortierella verticil... [more]
gi|219118921|ref|XP_002180227.1|0.000e+054.11malate synthase [Phaeodactylum tricornutum CCAP 10... [more]
gi|299117533|emb|CBN75377.1|0.000e+055.45Malate synthase [Ectocarpus siliculosus][more]
gi|1173954984|gb|OQS02073.1|0.000e+055.16malate synthase [Thraustotheca clavata][more]
gi|669156336|ref|XP_008613730.1|0.000e+054.32malate synthase A [Saprolegnia diclina VS20] >gi|5... [more]
gi|1183478652|gb|ORZ02491.1|0.000e+053.10malate synthase A [Syncephalastrum racemosum][more]
gi|384495450|gb|EIE85941.1|0.000e+052.97malate synthase A [Rhizopus delemar RA 99-880][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7736rna7736Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications