EWM22962.1, cds7708 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|585103695|gb|EWM22962.1| (hypothetical protein Naga_100102g6 [Nannochloropsis gaditana]) HSP 1 Score: 342.813 bits (878), Expect = 2.381e-119 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 Query: 1 MTSQAISTARQRGGRKRAGLAPRWRHQADGDGGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDWDYSLEDAEERQTQQSQPSA 166 MTSQAISTARQRGGRKRAGLAPRWRHQADGDGGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDWDYSLEDAEERQTQQSQPSA Sbjct: 1 MTSQAISTARQRGGRKRAGLAPRWRHQADGDGGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDWDYSLEDAEERQTQQSQPSA 166
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|568028568|gb|ETM02507.1| (hypothetical protein L917_01046, partial [Phytophthora parasitica]) HSP 1 Score: 124.79 bits (312), Expect = 8.591e-33 Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0 Query: 25 RHQADGDGGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDWDYSL 151 R GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W ++ Sbjct: 76 RKMKSQKGGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPQVFQWGEGSWGKAV 201
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|953490929|emb|CEG46112.1| (T-cell activation inhibitor, mitochondrial, partial [Plasmopara halstedii]) HSP 1 Score: 124.02 bits (310), Expect = 1.151e-32 Identity = 60/123 (48.78%), Postives = 73/123 (59.35%), Query Frame = 0 Query: 25 RHQADGDGGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 R + G P+L++TLRK +LR HPDLF YP Q+ N+ES+ LD + + PP L S FFLKT +G FQEV L LRTTGG C LV+ +L FF EC LPE F W EG W Sbjct: 70 RKMKNEKHGKIPMLKETLRKLYLRTHPDLFGRYPNQQRANEESYKELLGILDAIEKHNEFPPAKTL-SLPFFLKTPVEGEFQEVKLRLRTTGGACNTLVEEALGRFFGECSLPEVFQWGEGSW 191
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|301121402|ref|XP_002908428.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103459|gb|EEY61511.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 124.79 bits (312), Expect = 3.558e-32 Identity = 59/116 (50.86%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLPE F W EG W Sbjct: 6 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPEVFQWGEGSW 120
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|301121406|ref|XP_002908430.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103461|gb|EEY61513.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 125.176 bits (313), Expect = 1.222e-31 Identity = 59/116 (50.86%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLPE F W EG W Sbjct: 47 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKYNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPEVFQWGEGSW 161
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|568028562|gb|ETM02501.1| (hypothetical protein L917_01047 [Phytophthora parasitica]) HSP 1 Score: 124.02 bits (310), Expect = 1.358e-31 Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W Sbjct: 6 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPQVFQWGEGSW 120
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|567971053|gb|ETK96068.1| (hypothetical protein L915_01092 [Phytophthora parasitica] >gi|567999403|gb|ETL49443.1| hypothetical protein L916_01076 [Phytophthora parasitica]) HSP 1 Score: 123.635 bits (309), Expect = 2.015e-31 Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W Sbjct: 6 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPQVFRWGEGSW 120
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|1214699917|gb|OWZ12611.1| (putative mitochondrial protein [Phytophthora megakarya]) HSP 1 Score: 125.176 bits (313), Expect = 2.229e-31 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDWDYSL 151 GG P+L+ TLRK ++R HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W ++ Sbjct: 78 GGKVPMLKDTLRKLYMRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGQFFGECGLPQAFQWGEGSWGKAV 196
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|568028564|gb|ETM02503.1| (hypothetical protein L917_01049, partial [Phytophthora parasitica]) HSP 1 Score: 123.635 bits (309), Expect = 2.362e-31 Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W Sbjct: 15 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPQVFQWGEGSW 129
BLAST of EWM22962.1 vs. NCBI_GenBank
Match: gi|567971055|gb|ETK96070.1| (hypothetical protein L915_01094, partial [Phytophthora parasitica]) HSP 1 Score: 123.635 bits (309), Expect = 2.425e-31 Identity = 58/116 (50.00%), Postives = 73/116 (62.93%), Query Frame = 0 Query: 32 GGAHPLLQQTLRKFFLRVHPDLFTYYPKQKDVNQESFSRFQAFLDDVRDKDTAPPRAGLHSYRFFLKTKEDGRFQEVSLELRTTGGDCRNLVQRSLEAFFKECGLPEKFVWAEGDW 147 GG P+L+ TLRK +LR HPDLF YP+Q+ N+ES+ LD + + PP L FFLKT +G F+EV L+LRTTGG C LV+ +L FF ECGLP+ F W EG W Sbjct: 23 GGKVPMLKDTLRKLYLRTHPDLFGRYPEQQRANEESYKELLGILDAIEKHNEFPPAKTL-VLPFFLKTPVEGEFKEVDLQLRTTGGACNTLVEEALGRFFGECGLPQVFQWGEGSW 137 The following BLAST results are available for this feature:
BLAST of EWM22962.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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