EWM22990.1, cds7684 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|585103740|gb|EWM22990.1| (phenylalanyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 340.117 bits (871), Expect = 1.964e-118 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF Sbjct: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|397644602|gb|EJK76462.1| (hypothetical protein THAOC_01772, partial [Thalassiosira oceanica]) HSP 1 Score: 300.056 bits (767), Expect = 2.591e-101 Identity = 139/162 (85.80%), Postives = 148/162 (91.36%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA QPGGF P KYFSIDRVFRNESMDATHLCEFHQVEGLVAD NL+LGDLIGTI+TFF +IGIT L+FKPA+NPYTEPSME+FGYHPDLKKWTEIGNSGMFRPEML PMGLPE+VRVIAWGLSLERPTMIKYRI NIR LFGHK L TR APIC+F Sbjct: 66 MLYKLANQPGGFKPAKYFSIDRVFRNESMDATHLCEFHQVEGLVADYNLSLGDLIGTIETFFRKIGITQLRFKPAFNPYTEPSMEVFGYHPDLKKWTEIGNSGMFRPEMLAPMGLPENVRVIAWGLSLERPTMIKYRIDNIRNLFGHKVDLAMTRNAPICRF 227
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|299472119|emb|CBN77104.1| (Phenylalanine--tRNA ligase [Ectocarpus siliculosus]) HSP 1 Score: 301.597 bits (771), Expect = 2.022e-98 Identity = 134/162 (82.72%), Postives = 152/162 (93.83%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 ML+++A Q GGF+P++YFSIDRVFRNE+MDATHLCEFHQVEG++ADRNL LGDLIG IKTFF +IGIT ++FKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEML PMGLP+DVRVIAWGLSLERPTMIKY I+NIRELFGHKA L+RT+ AP+C+F Sbjct: 343 MLHRIANQEGGFTPKRYFSIDRVFRNETMDATHLCEFHQVEGMIADRNLCLGDLIGVIKTFFHKIGITQIRFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLLPMGLPKDVRVIAWGLSLERPTMIKYGITNIRELFGHKADLNRTKTAPVCRF 504
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|1210526166|dbj|GAX15084.1| (phenylalanyl-tRNA synthetase alpha chain [Fistulifera solaris]) HSP 1 Score: 301.212 bits (770), Expect = 3.501e-98 Identity = 136/162 (83.95%), Postives = 150/162 (92.59%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA Q GGF P +YFSIDRVFRNE+MDATHLCEFHQVEGLVAD +L+LGDLIGTI+TFF++IGIT L+FKPA+NPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEML PMGLPE+VRVIAWGLSLERPTMIKYRI NIRELFGHK + RTR AP+C+F Sbjct: 341 MLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFKKIGITKLRFKPAFNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLAPMGLPENVRVIAWGLSLERPTMIKYRIKNIRELFGHKVDMGRTRTAPVCRF 502
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|219111869|ref|XP_002177686.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410571|gb|EEC50500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 299.671 bits (766), Expect = 1.006e-97 Identity = 135/162 (83.33%), Postives = 150/162 (92.59%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA Q GGF P +Y+SIDRVFRNE+MDATHLCEFHQVEGLVAD +L+LGDLIGTI+TFF +IGIT+L+FKPA+NPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEML PMGLPE+VRVIAWGLSLERPTMIKYRI NIR+LFGHK + RTR APIC+F Sbjct: 338 MLYKLANQEGGFQPARYYSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFNKIGITELRFKPAFNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLAPMGLPENVRVIAWGLSLERPTMIKYRIKNIRDLFGHKVEMARTRTAPICRF 499
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|1210517388|dbj|GAX23645.1| (phenylalanyl-tRNA synthetase alpha chain [Fistulifera solaris]) HSP 1 Score: 298.13 bits (762), Expect = 4.572e-97 Identity = 135/162 (83.33%), Postives = 149/162 (91.98%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA Q GGF P +YFSIDRVFRNE+MDATHLCEFHQVEGLVAD +L+LGDLIGTI+TFF++IGIT L+FKPA+NPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEML PM LPE+VRVIAWGLSLERPTMIKYRI NIRELFGHK + RTR AP+C+F Sbjct: 341 MLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYDLSLGDLIGTIETFFKKIGITKLRFKPAFNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLAPMELPENVRVIAWGLSLERPTMIKYRIKNIRELFGHKVDMGRTRTAPVCRF 502
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|224001682|ref|XP_002290513.1| (phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335] >gi|220973935|gb|EED92265.1| phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 295.819 bits (756), Expect = 3.287e-96 Identity = 134/162 (82.72%), Postives = 147/162 (90.74%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA Q GGF P +YFSIDRVFRNE+MDATHLCEFHQVEGLVAD NL+LGDLIGTI+TFF +IGIT L+FKPA+NPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEML PMGLPE+VRVIAWGLSLERPTMIKYRI NIR LFGHK + T+ AP+C+F Sbjct: 337 MLYKLANQEGGFKPARYFSIDRVFRNETMDATHLCEFHQVEGLVADYNLSLGDLIGTIETFFRKIGITKLRFKPAFNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLAPMGLPENVRVIAWGLSLERPTMIKYRIDNIRNLFGHKVDMGMTKNAPVCRF 498
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|635367607|emb|CCI44216.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 283.493 bits (724), Expect = 1.497e-95 Identity = 129/162 (79.63%), Postives = 147/162 (90.74%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA QP GF PRKYFSIDRVFRNE+MDATHL EFHQVEG+VAD NL+LGDLIG I+ FF++IGIT ++FKPAYNPYTEPSMEIF +HPDLKKWTEIGNSG+FRPEML PMGLP+DVRVIAWGLSLERPTMIKYRI NIRELFGHK L++T+AA + ++ Sbjct: 38 MLYKLANQPEGFQPRKYFSIDRVFRNENMDATHLAEFHQVEGVVADYNLSLGDLIGIIEAFFKKIGITKMRFKPAYNPYTEPSMEIFAFHPDLKKWTEIGNSGVFRPEMLLPMGLPKDVRVIAWGLSLERPTMIKYRIDNIRELFGHKVDLEKTKAAKLYRY 199
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|1072230708|gb|OEU15441.1| (tRNA-synt_2d-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 293.893 bits (751), Expect = 2.444e-95 Identity = 132/161 (81.99%), Postives = 147/161 (91.30%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQ 161 MLY+LA QPGGF P ++FSIDRVFRNE+MDATHLCEFHQVEG VAD +L+LGDL+GTI+TF +IGIT L+FKPA+NPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRI NIR+LFGHK + RTR AP+ + Sbjct: 338 MLYKLANQPGGFKPARHFSIDRVFRNETMDATHLCEFHQVEGWVADYDLSLGDLLGTIETFLNKIGITQLRFKPAFNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRIDNIRDLFGHKVEMARTRTAPLLE 498
BLAST of EWM22990.1 vs. NCBI_GenBank
Match: gi|635367608|emb|CCI44217.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 286.574 bits (732), Expect = 1.427e-94 Identity = 129/162 (79.63%), Postives = 147/162 (90.74%), Query Frame = 0 Query: 1 MLYQLATQPGGFSPRKYFSIDRVFRNESMDATHLCEFHQVEGLVADRNLTLGDLIGTIKTFFERIGITDLKFKPAYNPYTEPSMEIFGYHPDLKKWTEIGNSGMFRPEMLRPMGLPEDVRVIAWGLSLERPTMIKYRISNIRELFGHKAALDRTRAAPICQF 162 MLY+LA QP GF PRKYFSIDRVFRNE+MDATHL EFHQVEG+VAD NL+LGDLIG I+ FF++IGIT ++FKPAYNPYTEPSMEIF +HPDLKKWTEIGNSG+FRPEML PMGLP+DVRVIAWGLSLERPTMIKYRI NIRELFGHK L++T+AA + ++ Sbjct: 188 MLYKLANQPEGFQPRKYFSIDRVFRNENMDATHLAEFHQVEGVVADYNLSLGDLIGIIEAFFKKIGITKMRFKPAYNPYTEPSMEIFAFHPDLKKWTEIGNSGVFRPEMLLPMGLPKDVRVIAWGLSLERPTMIKYRIDNIRELFGHKVDLEKTKAAKLYRY 349 The following BLAST results are available for this feature:
BLAST of EWM22990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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