EWM23040.1, cds7635 (CDS) Nannochloropsis gaditana

Overview
NameEWM23040.1
Unique Namecds7635
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:488148..488241 +
Alignment locationCM002472.1:488409..488557 +
Alignment locationCM002472.1:488698..488829 +
Alignment locationCM002472.1:489114..489233 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23040.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100703g1.8465.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:488148..488241 +
CM002472.1supercontigCM002472.1:488409..488557 +
CM002472.1supercontigCM002472.1:488698..488829 +
CM002472.1supercontigCM002472.1:489114..489233 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029068Glyas_Bleomycin-R_OHBP_Dase
Homology
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BLAST of EWM23040.1 vs. NCBI_GenBank
Match: gi|585103845|gb|EWM23040.1| (hypothetical protein Naga_100703g1 [Nannochloropsis gaditana])

HSP 1 Score: 337.806 bits (865), Expect = 1.527e-117
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 
Query:    1 MSLRVWIAAGVACSLASLATAFLPPSLSCRAGTSTFPSLTVNRKALAAPLTATKKEKTAWDAEEQYEVLPEDTFILRPDVKDYAKLTEEEMAATESVGSTAPDQSHTTFVPNSHPFAHARLLNVVCRVADLEKTVKFYEALGMINLREKVTPEYSASVMGFGCA 164
            MSLRVWIAAGVACSLASLATAFLPPSLSCRAGTSTFPSLTVNRKALAAPLTATKKEKTAWDAEEQYEVLPEDTFILRPDVKDYAKLTEEEMAATESVGSTAPDQSHTTFVPNSHPFAHARLLNVVCRVADLEKTVKFYEALGMINLREKVTPEYSASVMGFGCA
Sbjct:    1 MSLRVWIAAGVACSLASLATAFLPPSLSCRAGTSTFPSLTVNRKALAAPLTATKKEKTAWDAEEQYEVLPEDTFILRPDVKDYAKLTEEEMAATESVGSTAPDQSHTTFVPNSHPFAHARLLNVVCRVADLEKTVKFYEALGMINLREKVTPEYSASVMGFGCA 164
The following BLAST results are available for this feature:
BLAST of EWM23040.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103845|gb|EWM23040.1|1.527e-117100.00hypothetical protein Naga_100703g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7655rna7655Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications