EWM23055.1, cds7618 (CDS) Nannochloropsis gaditana

Overview
NameEWM23055.1
Unique Namecds7618
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:438790..438998 +
Alignment locationCM002472.1:439108..439196 +
Alignment locationCM002472.1:439317..439438 +
Alignment locationCM002472.1:439607..439859 +

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Properties
Property NameValue
End range.
End range439859
Protein idEWM23055.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101320g2.4562.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:438790..438998 +
CM002472.1supercontigCM002472.1:439108..439196 +
CM002472.1supercontigCM002472.1:439317..439438 +
CM002472.1supercontigCM002472.1:439607..439859 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM23055.1 vs. NCBI_GenBank
Match: gi|585103867|gb|EWM23055.1| (hypothetical protein Naga_101320g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 439.884 bits (1130), Expect = 6.582e-156
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 
Query:    1 MLFLTKLLRAGAFAVSVLAYSYLELIDLSGLAPGNGIESGHGTENGKGGDFLTASMGAAGITLPPASVMSMYLTYLPIFVVPLLFLGLCVGGSFQGMNAVLHHTLLVLAAVRPSPSLPLFLLFLASAAGYWASGGVASEQSDKVAFRPYESEIRQLLLRHDPAQLHRVDSLLEGYQWRGGGKRLLQVPPLPPFFLLPSLPPPPSHLVCAPPQPVFFPPSALASI 224
            MLFLTKLLRAGAFAVSVLAYSYLELIDLSGLAPGNGIESGHGTENGKGGDFLTASMGAAGITLPPASVMSMYLTYLPIFVVPLLFLGLCVGGSFQGMNAVLHHTLLVLAAVRPSPSLPLFLLFLASAAGYWASGGVASEQSDKVAFRPYESEIRQLLLRHDPAQLHRVDSLLEGYQWRGGGKRLLQVPPLPPFFLLPSLPPPPSHLVCAPPQPVFFPPSALASI
Sbjct:    1 MLFLTKLLRAGAFAVSVLAYSYLELIDLSGLAPGNGIESGHGTENGKGGDFLTASMGAAGITLPPASVMSMYLTYLPIFVVPLLFLGLCVGGSFQGMNAVLHHTLLVLAAVRPSPSLPLFLLFLASAAGYWASGGVASEQSDKVAFRPYESEIRQLLLRHDPAQLHRVDSLLEGYQWRGGGKRLLQVPPLPPFFLLPSLPPPPSHLVCAPPQPVFFPPSALASI 224
The following BLAST results are available for this feature:
BLAST of EWM23055.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103867|gb|EWM23055.1|6.582e-156100.00hypothetical protein Naga_101320g2, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7638rna7638Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications