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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101320g2.4562.mrna |
| Orig protein id | gnl|cribi|Naga_101320g2.4562 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002472.1 | supercontig | CM002472.1:438597..439859 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7638 ID=rna7638|Name=rna7638|organism=Nannochloropsis gaditana|type=mRNA|length=891bp
GAAAGAAGTTTTCTGGTGCCCTTCGTGTCCATTTCACTGACCTCTCTCGC
CCCCCTCCCCTCCCCCTCTGCATTCTTTACAGGCACCACAAACCCCACCC
GCTGTTTCAATTATGAACCCCTACGGCCAGCATCAGCAGCAGCAAATGTT
CTACGGCCAGCCCCCGCAACAGCAACAGCAACAACAACCGTACGGCGCGG
GCGGCTATGCGCATCCACAGCAGCAGCAGTACCCTCCTCAGGCGCCCTCT
CAGGCTTATGGGGGCTACATGCAACAACCACAACAACCTACCGGCTACCC
TCCCCAGCAAGCTTACCCTCCTCAAGCACAGCCGCAGCAATTTTCACCCG
CGCAAATTCCCGCCCAGCCCAGTTATCAACCGCAGCCGGTCCCTCAAGTT
CAGGAGCCGCAATATAGCCAAATACCGCCCGCGGCGGGAAGCTCTGCCCT
CCCGACTCAAGTTACTGCCGGTCCCGGGGGGGATATGTCCATGGAGACGC
AGCACGAAGACATGATCCACGACGCTCAGTTGGATTACTACGGGAAGAAA
CTTGCCACCTGCTCCAGCGACCGGACCATCAAGATCTTTGAAGTGACCGG
CGGACAGACGCCTTCCTCTTCCCCTCCCTACACGATCCAAGCGCACTCCG
GTCCAGTCTGGCAGGTCGCGTGGGCGCACCCTCGTTGGGGTTGCTTGGTG
GCCTCCGCCTCCTACGATGGGACGGTCCTCATCCACCGAGAAAACAAGGA
GCAAGGCGTCTGGGACACGGGCGTCGTCCATCAGGGCCTCGAGAACCAGA
GCGTGAACAGCATCGCCTTTGTACGCCTCCCTCCCTCCCTCTCTCCCTTC
CTCCCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCTATG back to topprotein sequence of rna7638 >rna7638-protein ID=rna7638-protein|Name=rna7638|organism=Nannochloropsis gaditana|type=polypeptide|length=224bp
MLFLTKLLRAGAFAVSVLAYSYLELIDLSGLAPGNGIESGHGTENGKGGD
FLTASMGAAGITLPPASVMSMYLTYLPIFVVPLLFLGLCVGGSFQGMNAV
LHHTLLVLAAVRPSPSLPLFLLFLASAAGYWASGGVASEQSDKVAFRPYE
SEIRQLLLRHDPAQLHRVDSLLEGYQWRGGGKRLLQVPPLPPFFLLPSLP
PPPSHLVCAPPQPVFFPPSALASI back to topmRNA from alignment at CM002472.1:438597..439859+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7638 ID=rna7638|Name=rna7638|organism=Nannochloropsis gaditana|type=mRNA|length=1263bp|location=Sequence derived from alignment at CM002472.1:438597..439859+ (Nannochloropsis gaditana)
GGTGGCGAGCTTTGTAGGTTAAAGGCCTTGATCTTCGCCCGCGGGAGGGT
TCATTTGGATAAATTGAacgggacgagaaagatgATAATGGAGAGCGTTC
GTGCTCCCACCGCCATTATTCTCGTTTCCCACACACGGTGCAGGACCTTA
CGACTCACGACGACACTCTTCCACAGACAGTATTGCCAGGGGCATGTTGT
TCTTGACGAAACTTCTGCGAGCGGGTGCTTTTGCGGTTTCTGTTCTCGCG
TACTCTTATTTAGAGCTGATCGATCTCTCCGGACTTGCACCGGGAAACGG
GATAGAGAGCGGGCATGGGActgaaaatggaaaaggaggggactTCTTGA
CGGCCAGCATGGGAGCCGCAGGGATAACGTTGCCACCAGCCAGTGTCATG
AGGTGGGTACGTGGGAGCAGTGTGAGTGGACCGTTTTTGTTCCAAGTGAT
TTGATACTTGCGTGCTTCATTGCTCGGTCTCATTGGTttttccctcgtcc
tcgcacGCCAGCATGTATTTGACATATCTTCCGATCTTCGTCGTCCCGCT
GCTCTTTCTTGGACTCTGTGTCGGTGGGAGTTTCCAGGGCATGAACgcgg
gtgggtgggggggacgggagggggagagggaaggaaaaagaagggggggg
aaactACCACATCCCACAAGCCTAGGCGTTTCCAAAGCCCTGTGCTAACA
TCCTTTCTTGTCCCTACCAGTCTTGCATcacaccctcctcgtcctggcCG
CAGTgcgtccatctccttccctacccctcttcctcctcttcctcgcctcc
gcgGCGGGCTACTGGGCGAGCGGAGGGGTGGCCTCCGAGCAGGTAAAGCC
TTCTAGAACCTCGGTGCAGGCATGCGGAGGGGACCTGCAGGACGTGCATG
ATCAGGGGTCATGCTGGGGCCTACGctggccaccaccttcccctccttac
tgacatgctctccccccctcataTCTCCCTGCGTGCTCCCCGATCCGATC
CTTTACCAAGAGCGACAAGGTGGCATTCCGTCCCTATGAATCTGAGATTc
gtcagctcctcctccggcacgACCCCGCCCAGCTTCATCGGGTCGACTCC
CTCTTGGAGGGGTATcagtggcgggggggagggaagcgactGTTACAGgt
accccccctccctcctttcttcctccttccctccctccctcccccccctt
cccatctcgtctgcgcccccccccaacctgTATTTTTCCCCCCGTCCGCG
TTGGCCTCCATAG back to topCoding sequence (CDS) from alignment at CM002472.1:438597..439859+ >rna7638 ID=rna7638|Name=rna7638|organism=Nannochloropsis gaditana|type=CDS|length=2692bp|location=Sequence derived from alignment at CM002472.1:438597..439859+ (Nannochloropsis gaditana)
ATGTTGTTCTTGACGAAACTTCTGCGAGCGGGTGCTTTTGCGGTTTCTGT
TCTCGCGTACTCTTATTTAGAGCTGATCGATCTCTCCGGACTTGCACCGG
GAAACGGGATAGAGAGCGGGCATGGGActgaaaatggaaaaggaggggac
tTCTTGACGGCCAGCATGGGAGCCGCAGGGATAACGTTGCCACCAGCCAG
TGTCATGAGCATGTATTTGACATATCTTCCGATCTTCGTCGTCCCGCTGC
TCTTTCTTGGACTCTGTGTCGGTGGGAGTTTCCAGGGCATGAACgcggTC
TTGCATcacaccctcctcgtcctggcCGCAGTgcgtccatctccttccct
acccctcttcctcctcttcctcgcctccgcgGCGGGCTACTGGGCGAGCG
GAGGGGTGGCCTCCGAGCAGAGCGACAAGGTGGCATTCCGTCCCTATGAA
TCTGAGATTcgtcagctcctcctccggcacgACCCCGCCCAGCTTCATCG
GGTCGACTCCCTCTTGGAGGGGTATcagtggcgggggggagggaagcgac
tGTTACAGgtaccccccctccctcctttcttcctccttccctccctccct
ccccccccttcccatctcgtctgcgcccccccccaacctgTATTTTTCCC
CCCGTCCGCGTTGGCCTCCATAGATGTTGTTCTTGACGAAACTTCTGCGA
GCGGGTGCTTTTGCGGTTTCTGTTCTCGCGTACTCTTATTTAGAGCTGAT
CGATCTCTCCGGACTTGCACCGGGAAACGGGATAGAGAGCGGGCATGGGA
ctgaaaatggaaaaggaggggactTCTTGACGGCCAGCATGGGAGCCGCA
GGGATAACGTTGCCACCAGCCAGTGTCATGAGCATGTATTTGACATATCT
TCCGATCTTCGTCGTCCCGCTGCTCTTTCTTGGACTCTGTGTCGGTGGGA
GTTTCCAGGGCATGAACgcggTCTTGCATcacaccctcctcgtcctggcC
GCAGTgcgtccatctccttccctacccctcttcctcctcttcctcgcctc
cgcgGCGGGCTACTGGGCGAGCGGAGGGGTGGCCTCCGAGCAGAGCGACA
AGGTGGCATTCCGTCCCTATGAATCTGAGATTcgtcagctcctcctccgg
cacgACCCCGCCCAGCTTCATCGGGTCGACTCCCTCTTGGAGGGGTATca
gtggcgggggggagggaagcgactGTTACAGgtaccccccctccctcctt
tcttcctccttccctccctccctccccccccttcccatctcgtctgcgcc
cccccccaacctgTATTTTTCCCCCCGTCCGCGTTGGCCTCCATAGATGT
TGTTCTTGACGAAACTTCTGCGAGCGGGTGCTTTTGCGGTTTCTGTTCTC
GCGTACTCTTATTTAGAGCTGATCGATCTCTCCGGACTTGCACCGGGAAA
CGGGATAGAGAGCGGGCATGGGActgaaaatggaaaaggaggggactTCT
TGACGGCCAGCATGGGAGCCGCAGGGATAACGTTGCCACCAGCCAGTGTC
ATGAGCATGTATTTGACATATCTTCCGATCTTCGTCGTCCCGCTGCTCTT
TCTTGGACTCTGTGTCGGTGGGAGTTTCCAGGGCATGAACgcggTCTTGC
ATcacaccctcctcgtcctggcCGCAGTgcgtccatctccttccctaccc
ctcttcctcctcttcctcgcctccgcgGCGGGCTACTGGGCGAGCGGAGG
GGTGGCCTCCGAGCAGAGCGACAAGGTGGCATTCCGTCCCTATGAATCTG
AGATTcgtcagctcctcctccggcacgACCCCGCCCAGCTTCATCGGGTC
GACTCCCTCTTGGAGGGGTATcagtggcgggggggagggaagcgactGTT
ACAGgtaccccccctccctcctttcttcctccttccctccctccctcccc
ccccttcccatctcgtctgcgcccccccccaacctgTATTTTTCCCCCCG
TCCGCGTTGGCCTCCATAGATGTTGTTCTTGACGAAACTTCTGCGAGCGG
GTGCTTTTGCGGTTTCTGTTCTCGCGTACTCTTATTTAGAGCTGATCGAT
CTCTCCGGACTTGCACCGGGAAACGGGATAGAGAGCGGGCATGGGActga
aaatggaaaaggaggggactTCTTGACGGCCAGCATGGGAGCCGCAGGGA
TAACGTTGCCACCAGCCAGTGTCATGAGCATGTATTTGACATATCTTCCG
ATCTTCGTCGTCCCGCTGCTCTTTCTTGGACTCTGTGTCGGTGGGAGTTT
CCAGGGCATGAACgcggTCTTGCATcacaccctcctcgtcctggcCGCAG
Tgcgtccatctccttccctacccctcttcctcctcttcctcgcctccgcg
GCGGGCTACTGGGCGAGCGGAGGGGTGGCCTCCGAGCAGAGCGACAAGGT
GGCATTCCGTCCCTATGAATCTGAGATTcgtcagctcctcctccggcacg
ACCCCGCCCAGCTTCATCGGGTCGACTCCCTCTTGGAGGGGTATcagtgg
cgggggggagggaagcgactGTTACAGgtaccccccctccctcctttctt
cctccttccctccctccctccccccccttcccatctcgtctgcgcccccc
cccaacctgTATTTTTCCCCCCGTCCGCGTTGGCCTCCATAG back to top
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