EWM23194.1, cds7481 (CDS) Nannochloropsis gaditana

Overview
NameEWM23194.1
Unique Namecds7481
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:100711..101736 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23194.1
Productfggy-family pentulose kinase
Orig transcript idgnl|cribi|Naga_100485g2.10095.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:100711..101736 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|585104087|gb|EWM23194.1| (fggy-family pentulose kinase [Nannochloropsis gaditana])

HSP 1 Score: 701.049 bits (1808), Expect = 0.000e+0
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
Query:    1 MASPRDDPPLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDEEAEADGGGWSVRRKDKGWKVLEGSGRMKRLGPGKSTSVVAFGPEQIVATLLNSRAPTTSAKQ 341
            MASPRDDPPLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDEEAEADGGGWSVRRKDKGWKVLEGSGRMKRLGPGKSTSVVAFGPEQIVATLLNSRAPTTSAKQ
Sbjct:    1 MASPRDDPPLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDEEAEADGGGWSVRRKDKGWKVLEGSGRMKRLGPGKSTSVVAFGPEQIVATLLNSRAPTTSAKQ 341          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1032696995|ref|WP_064274402.1| (ribulokinase [Gluconobacter cerinus] >gi|1028600072|gb|OAJ67599.1| ribulokinase [Gluconobacter cerinus])

HSP 1 Score: 140.969 bits (354), Expect = 6.373e-34
Identity = 102/266 (38.35%), Postives = 129/266 (48.50%), Query Frame = 0
Query:   10 LYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEA-SFYDLTDYLSHRACRRDGEEGQHGDL-RSLCCVGSKWLY 273
            L LGIDVGTGSARA  FT  G ++  A V   KT+ P   P   QQS+ENIW A+C+A  TAL ++ + +                   R++G+ FDATCSLVV     +P+ V PQ          G AE+            +++LW DHRA RE AEIN              N   + LR+VGGKISPE + PKLLWLKR+L              E+   A  F+DL D+L+ RA          G L RS C    KW Y
Sbjct:    3 LVLGIDVGTGSARAGIFTLTGQKMASA-VQPTKTWSPA--PDFAQQSSENIWAAICTATRTALATLTEPF-------------------RIIGIGFDATCSLVVLDTEGKPLSVDPQ----------GAAEQ------------NIILWADHRALRETAEIN--------------NGGYEVLRYVGGKISPEMETPKLLWLKRNLP-------------EIFARAGHFFDLPDFLTWRAT---------GSLSRSACSTACKWTY 188          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|822048525|ref|WP_046901878.1| (ribulokinase [Gluconobacter oxydans])

HSP 1 Score: 139.813 bits (351), Expect = 1.434e-33
Identity = 100/265 (37.74%), Postives = 127/265 (47.92%), Query Frame = 0
Query:   10 LYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDL-RSLCCVGSKWLY 273
            L LGIDVGTGSARA  FT  G ++  A V   KT+ P   P   QQS+ENIW A+C+A  TAL ++ + +                   R++G+ FDATCSLVV     +P+ V PQ A         P +             +++LW DHRA RE AEIN              N   + LR+VGGKISPE + PKLLWLKR+L   I+                F+DL D+L+ RA          G L RS C    KW Y
Sbjct:    3 LVLGIDVGTGSARAGIFTLTGQKMASA-VQPTKTWSPA--PDFAQQSSENIWTAICTATRTALATLTEPF-------------------RIIGIGFDATCSLVVLDTEGKPLSVDPQGA---------PKQ-------------NIILWADHRALRETAEIN--------------NGRYEVLRYVGGKISPEMETPKLLWLKRNLP-EIFARA-----------GHFFDLPDFLTWRAT---------GSLSRSACSTACKWTY 188          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1197617644|ref|WP_086633855.1| (ribulokinase [Gluconobacter sp. DsW_058] >gi|1195477890|gb|OUJ07998.1| ribulokinase [Gluconobacter sp. DsW_058])

HSP 1 Score: 139.428 bits (350), Expect = 1.823e-33
Identity = 101/267 (37.83%), Postives = 126/267 (47.19%), Query Frame = 0
Query:   10 LYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPD--VVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDL-RSLCCVGSKWLY 273
            L LGIDVGTGSARA  FT  G ++  A V   KT+ P   P   QQS+ENIW A+C+A  TAL ++ + +                   R++G+ FDATCSLVV     +P+ V PQ A                        PD  ++LW DHRA RE AEIN              N   + LR+VGGKISPE + PKLLWLKR+L   I+                F+DL D+L+ RA          G L RS C    KW Y
Sbjct:    3 LVLGIDVGTGSARAGIFTLTGQKMASA-VQPTKTWSPA--PDFAQQSSENIWTAICTATRTALATLTEPF-------------------RIIGIGFDATCSLVVLDTEGKPLSVDPQGA------------------------PDQNIILWADHRALRETAEIN--------------NGGYEVLRYVGGKISPEMETPKLLWLKRNLP-EIFARA-----------GHFFDLPDFLTWRAT---------GSLSRSACSTACKWTY 188          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1039422886|ref|WP_064788411.1| (ribulokinase [Thalassospira profundimaris] >gi|1036252062|gb|OAZ14024.1| ribulokinase [Thalassospira profundimaris])

HSP 1 Score: 138.658 bits (348), Expect = 2.782e-33
Identity = 96/271 (35.42%), Postives = 127/271 (46.86%), Query Frame = 0
Query:    9 PLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDE 279
            P ++G+DVGTGSARA  F   G  +G A    I   RP   P   +Q +ENIW++VC +V  A+           SGV A         ++V  + FDATCSLV+R + ++P+ VTP  A  W                      DV++W+DHRA REA E  A                A+ L ++GG +SPE ++PKL+WLKRH  A  W +K G            YDL D+LS RA   +         RS C V  KW Y    DE
Sbjct:    6 PCFVGVDVGTGSARAGVFDANGKLLGSAA-HAIAMNRP--KPDFVEQDSENIWQSVCQSVRDAM---------AKSGVPA---------QKVAAIGFDATCSLVIRDQDNKPLGVTPNGADNW----------------------DVIVWMDHRAVREAEECTATG--------------AKVLEYIGGTMSPEMEIPKLMWLKRHHNAA-W-QKMGAA----------YDLADFLSFRATGSNA--------RSCCTVTCKWTYLAHQDE 199          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|766669533|ref|WP_044829361.1| (ribulokinase [Thalassospira sp. HJ] >gi|765369386|gb|KJE34333.1| ribulokinase [Thalassospira sp. HJ])

HSP 1 Score: 138.272 bits (347), Expect = 3.953e-33
Identity = 95/271 (35.06%), Postives = 127/271 (46.86%), Query Frame = 0
Query:    9 PLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDE 279
            P ++G+DVGTGSARA  F   G  +G A    I   RP   P   +Q +ENIW++VC +V  A+           SGV A         +++  + FDATCSLV+R + ++P+ VTP  A  W                      DV++W+DHRA REA E  A                A+ L ++GG +SPE ++PKL+WLKRH  A  W +K G            YDL D+LS RA   +         RS C V  KW Y    DE
Sbjct:    6 PCFVGVDVGTGSARAGVFDATGKLLGSAA-HAIAMNRP--KPDFVEQDSENIWQSVCQSVRDAM---------AKSGVPA---------EKIAAIGFDATCSLVIRDQDNKPLGVTPNGADNW----------------------DVIVWMDHRAVREAEECTATG--------------AKVLEYIGGTMSPEMEIPKLMWLKRHHNAA-W-QKMGAA----------YDLADFLSFRATGSNA--------RSCCTVTCKWTYLAHQDE 199          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|496165662|ref|WP_008890169.1| (carbohydrate kinase [Thalassospira profundimaris] >gi|407282742|gb|EKF08299.1| FGGY-family pentulose kinase [Thalassospira profundimaris WP0211])

HSP 1 Score: 137.887 bits (346), Expect = 6.034e-33
Identity = 96/271 (35.42%), Postives = 127/271 (46.86%), Query Frame = 0
Query:    9 PLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDE 279
            P ++G+DVGTGSARA  F   G  +G A    I   RP   P   +Q +ENIW++VC +V  A+           SGV A         ++V  + FDATCSLV+R + ++P+ VTP  A  W                      DV++W+DHRA REA E  A                A+ L ++GG +SPE ++PKL+WLKRH  A  W +K G            YDL D+LS RA   +         RS C V  KW Y    DE
Sbjct:    6 PCFVGVDVGTGSARAGVFDANGKLLGSAA-HAIAMNRP--KPDFVEQDSENIWQSVCQSVRDAM---------AKSGVPA---------QKVAAIGFDATCSLVIRDQDNRPLGVTPDGADNW----------------------DVIVWMDHRAVREAEECTATG--------------AKVLDYIGGTMSPEMEIPKLMWLKRHHNAA-W-QKMGAA----------YDLADFLSFRATGSNA--------RSCCTVTCKWTYLAHQDE 199          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1016501220|ref|WP_063087894.1| (MULTISPECIES: ribulokinase [Thalassospira] >gi|1016455081|gb|KZD00537.1| ribulokinase [Thalassospira sp. MCCC 1A02898] >gi|1139743477|gb|ONH86915.1| L-ribulokinase [Thalassospira sp. MCCC 1A02803])

HSP 1 Score: 137.502 bits (345), Expect = 7.739e-33
Identity = 95/271 (35.06%), Postives = 126/271 (46.49%), Query Frame = 0
Query:    9 PLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDE 279
            P ++G+DVGTGSARA  F   G  +G A    I   RP   P   +Q +ENIW +VC +V  A+           SG+ A         ++V  + FDATCSLV+R + ++P+ VTP  A  W                      DV++W+DHRA REA E  A                A+ L ++GG +SPE ++PKL+WLKRH  A  W +K G            YDL D+LS RA   +         RS C V  KW Y    DE
Sbjct:    6 PCFVGVDVGTGSARAGVFDANGKLLGSAA-HAIAMNRP--KPDFVEQDSENIWLSVCQSVRDAM---------AKSGIPA---------QKVAAIGFDATCSLVIRDQDNKPLGVTPNGADNW----------------------DVIVWMDHRAVREAEECTATG--------------AKVLEYIGGTMSPEMEIPKLMWLKRHHNAA-W-QKMGAA----------YDLADFLSFRATGSNA--------RSCCTVTCKWTYLAHQDE 199          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1039414720|ref|WP_064781887.1| (ribulokinase [Thalassospira tepidiphila] >gi|1036246894|gb|OAZ08877.1| ribulokinase [Thalassospira tepidiphila MCCC 1A03514])

HSP 1 Score: 137.502 bits (345), Expect = 9.647e-33
Identity = 95/271 (35.06%), Postives = 127/271 (46.86%), Query Frame = 0
Query:    9 PLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLYRHDGDE 279
            P ++G+DVGTGSARA  F   G  +G A    I   RP   P   +Q +ENIW++VC +V  A+           SGV A         ++V  + FDATCSLV+R + ++P+ VTP  A  W                      DV++W+DHRA REA E  A                A+ L ++GG +SPE ++PKL+WLKRH  A  W +K G            YDL D+LS +A   +         RS C V  KW Y    DE
Sbjct:    6 PCFVGVDVGTGSARAGVFDANGKLLGSAA-HAIAMNRP--KPDFVEQDSENIWQSVCQSVRDAM---------AKSGVPA---------QKVAAIGFDATCSLVIRDQDNKPLGVTPNGADNW----------------------DVIVWMDHRAVREAEECTATG--------------AKVLEYIGGTMSPEMEIPKLMWLKRHHNAA-W-QKMGAA----------YDLADFLSFQATGSNA--------RSCCTVTCKWTYLAHQDE 199          
BLAST of EWM23194.1 vs. NCBI_GenBank
Match: gi|1180434807|ref|WP_083952282.1| (ribulokinase [Rhodobacter aestuarii])

HSP 1 Score: 136.732 bits (343), Expect = 1.709e-32
Identity = 101/273 (37.00%), Postives = 126/273 (46.15%), Query Frame = 0
Query:    1 MASPRDDPPLYLGIDVGTGSARAAFFTDYGGQVGQAGVSRIKTFRPVGYPQLFQQSTENIWRAVCSAVHTALNSVVKIYSGKSSGVEAPREALFKVQKRVVGLAFDATCSLVVRGKGDQPVDVTPQNARTWVEMGQGPAEEELGGREGRKEVPDVVLWLDHRASREAAEINAWAQMDGDGTNQEENVIAQRLRHVGGKISPENQVPKLLWLKRHLEARIWGEKEGGQEGEMPCEASFYDLTDYLSHRACRRDGEEGQHGDLRSLCCVGSKWLY 273
            M+   D+   ++GIDVGTGSARA  F D  GQ+  +  + I TFRP   P   QQS+  IW AVC+A   AL           SGV             V G+ FDATCSLVV G G  PV V P  A         P +             DV+LW+DHRA  +AA+INA              +    L HVGG+ISPE ++PKL WLKR      W + +           +F+DL D+L HRA            +RSLC    KW Y
Sbjct:    1 MSHWEDNMRYFIGIDVGTGSARAGVF-DGAGQLLGSASAEITTFRPA--PDFAQQSSVEIWGAVCTATRAAL---------AQSGVAG---------DAVAGIGFDATCSLVVSGAGGAPVSVDPAGA---------PDQ-------------DVILWMDHRALADAAQINA--------------IGGAPLAHVGGRISPEMELPKLRWLKRE-APTAWAQAQ-----------AFWDLPDWLVHRA--------TGAAVRSLCSTVCKWTY 196          
The following BLAST results are available for this feature:
BLAST of EWM23194.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
Zoom :
x 1
01SequenceEWM23194.1WP_064274402.1WP_046901878.1WP_086633855.1WP_064788411.1WP_044829361.1WP_008890169.1WP_063087894.1WP_064781887.1WP_083952282.1
Match NameE-valueIdentityDescription
gi|585104087|gb|EWM23194.1|0.000e+0100.00fggy-family pentulose kinase [Nannochloropsis gadi... [more]
gi|1032696995|ref|WP_064274402.1|6.373e-3438.35ribulokinase [Gluconobacter cerinus] >gi|102860007... [more]
gi|822048525|ref|WP_046901878.1|1.434e-3337.74ribulokinase [Gluconobacter oxydans][more]
gi|1197617644|ref|WP_086633855.1|1.823e-3337.83ribulokinase [Gluconobacter sp. DsW_058] >gi|11954... [more]
gi|1039422886|ref|WP_064788411.1|2.782e-3335.42ribulokinase [Thalassospira profundimaris] >gi|103... [more]
gi|766669533|ref|WP_044829361.1|3.953e-3335.06ribulokinase [Thalassospira sp. HJ] >gi|765369386|... [more]
gi|496165662|ref|WP_008890169.1|6.034e-3335.42carbohydrate kinase [Thalassospira profundimaris] ... [more]
gi|1016501220|ref|WP_063087894.1|7.739e-3335.06MULTISPECIES: ribulokinase [Thalassospira] >gi|101... [more]
gi|1039414720|ref|WP_064781887.1|9.647e-3335.06ribulokinase [Thalassospira tepidiphila] >gi|10362... [more]
gi|1180434807|ref|WP_083952282.1|1.709e-3237.00ribulokinase [Rhodobacter aestuarii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7499rna7499Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications