rna7456, rna7456 (mRNA) Nannochloropsis gaditana

Overview
Namerna7456
Unique Namerna7456
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length937
Alignment locationCM002471.1:643236..644007 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100967g2.2221.mrna
Orig protein idgnl|cribi|Naga_100967g2.2221
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:643236..644007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100967g2gene7214Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23235.1cds7438Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7456rna7456-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7456 ID=rna7456|Name=rna7456|organism=Nannochloropsis gaditana|type=mRNA|length=937bp
ATCCAAGTACTTGCCAAGTCGGCAACGCGGGTTCCGAGACTGTTCTCGTG
CGTGAAGTTGCAGGTCGGATTTGCCAGGAGAGACATAGCCGTGCACGCAC
CGCCCTCCCTTTGGCGGCACCCAGCCATAGGGCCTCGTCCAGGGAGCAAT
TGCAGCATTGAGGTGATTGGGAGGAGGGCCGTTCTTTGAAATTGCGCATG
TGCCTGCCCGACGGCCCATGTCTGTATACCTCCAAGGCCAACAAGTGCGA
GAGGTAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGAGGA
GGCGTGTGTCCTCCAAAAAGAGGTCGAGAGAATGGCACGCTGGTCCATGT
GCCGCGCCACAACCCTCGCACGGCGTCAGCTGTATGCTTCAATCTGACTT
CTTTGTCCTCCCTTTTCTCCTTCCCCTTCCTCCTTCCCTTCCCCTCCTTC
CCTGCCTCAAGCAGCTCGAGTTCGGGTCGAACGCTTCCCTGCGAGCCACT
GCCTCCTCCCTCCTCCCCCCGCGGCCCCAGTACCCTCGCCCTTTCTCCGT
CTTCCCCTACCTATATCGAACCCCTGGTGTCCTTCCCGCCCCTTCAACGT
CCTGGACCGTGGGTGGCTCCCCACGACGGGAGGGGAATAGAAGACGATGG
AGGAGAAAGAGAAGGAAAGAGCGACGAGAGCACGGCGTGGGCCCAGGGGG
GGAGGAAGGGCGGGGATCGGGCGGAAGGAACGTTTCGAGGGCGGAGGAGC
GCCGGAGAGGGGGGGGGAAGCACCGAGGCGGTGCTTCCATGCTCGCTGAG
GAGACCGGAAGGGGTAGACGGGGTGGTGGTGAAGAAGCAAAGGAGGGAGG
GAAGTGGGGAGGTAGAGGAGGAAAAGGGGGGTTGGCGGGGAGGGCGGGAA
GCGGCAAGCGGGGAGAAGCAAGCGCTTGAGGAGGAGT
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protein sequence of rna7456

>rna7456-protein ID=rna7456-protein|Name=rna7456|organism=Nannochloropsis gaditana|type=polypeptide|length=240bp
MLCVKEINPSFPRGYQPCSIPSLPGVEFLVGNFQRTVNNWVQVSTAIANY
VAILSLLCSESTRTVMRATLLRRAFDPQRRPCVLDSAPQQSSLVLVSFTN
RLLHDTPIFSDAESPAMPLGRTHARHSVPSLLLLLLPALALAFRLRPSHP
KARGLSLCLKAAHPAPLHTRHAFLSTTSSALVPVLLLPSFPSPSLALVKG
NAPPKDMRKKTGGKSTAANMDEAIEAGRKRVRGRERGREG
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mRNA from alignment at CM002471.1:643236..644007-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7456 ID=rna7456|Name=rna7456|organism=Nannochloropsis gaditana|type=mRNA|length=772bp|location=Sequence derived from alignment at CM002471.1:643236..644007- (Nannochloropsis gaditana)
CATGTTGTGCGTGAAGGAAATTAATCCGTCTTTCCCCAGAGGTTATCAGC
CCTGCAGTATCCCTTCGCTGCCAGGCGTTGAATTTCTCGTTGGCAATTTC
CAACGTACGGTGAATAATTGGGTGCAAGTGAGTACGGCAATTGCAAATTA
TGTGGCTATTTTGTCTTTGTTGTGCAGTGAATCGACCAGGACGGTTATGA
GAGCCACCCTCTTAAGAAGGGCTTTCGACCCCCAACGGAGACCTTGCGTA
CTGGACTCCGCACCGCAACAGTCTTCCCTTGTACTCGTCTCATTCACGAA
CCGATTGCTTCATGATACCCCTATCTTTTCGGATGCAGAGAGCCCAGCTA
TGCCTCTAGGGCGCACCCACGCCCGTCACTCGGTTCCTTCCCTCCTCCTC
CTCCTCCTTCCAGCCCTCGCCCTCGCCTTCAGGCTCCGCCCTTCCCACCC
AAAAGCCCGAGGACTTTCTCTTTGTTTAAAAGCCGCCCACCCGGCCCCTC
TTCACACGCGGCATGCATTCCTGTCCACAACCTCCTCCGCTCTCGTCCCC
GTTCTTCTTCTCCCCTCCTTTCCCTCCCCCTCCCTGGCCTTGGTCAAAGG
AAATGCCCCCCCAAAGGACATGCGGAAAAAGACGGGCGGAAAGTCCACGG
CCGCGAACATGGACGAGGCGATCGAGGCGGGAAGGAAAAGGGTACGTGGG
AGGGAGAGAGGGAGGGAGGGATAGAAGGAGGGAGGTAGGTAGGTGTTGAA
TAGCACGGTATTGAGGAGAACG
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Coding sequence (CDS) from alignment at CM002471.1:643236..644007-

>rna7456 ID=rna7456|Name=rna7456|organism=Nannochloropsis gaditana|type=CDS|length=723bp|location=Sequence derived from alignment at CM002471.1:643236..644007- (Nannochloropsis gaditana)
ATGTTGTGCGTGAAGGAAATTAATCCGTCTTTCCCCAGAGGTTATCAGCC
CTGCAGTATCCCTTCGCTGCCAGGCGTTGAATTTCTCGTTGGCAATTTCC
AACGTACGGTGAATAATTGGGTGCAAGTGAGTACGGCAATTGCAAATTAT
GTGGCTATTTTGTCTTTGTTGTGCAGTGAATCGACCAGGACGGTTATGAG
AGCCACCCTCTTAAGAAGGGCTTTCGACCCCCAACGGAGACCTTGCGTAC
TGGACTCCGCACCGCAACAGTCTTCCCTTGTACTCGTCTCATTCACGAAC
CGATTGCTTCATGATACCCCTATCTTTTCGGATGCAGAGAGCCCAGCTAT
GCCTCTAGGGCGCACCCACGCCCGTCACTCGGTTCCTTCCCTCCTCCTCC
TCCTCCTTCCAGCCCTCGCCCTCGCCTTCAGGCTCCGCCCTTCCCACCCA
AAAGCCCGAGGACTTTCTCTTTGTTTAAAAGCCGCCCACCCGGCCCCTCT
TCACACGCGGCATGCATTCCTGTCCACAACCTCCTCCGCTCTCGTCCCCG
TTCTTCTTCTCCCCTCCTTTCCCTCCCCCTCCCTGGCCTTGGTCAAAGGA
AATGCCCCCCCAAAGGACATGCGGAAAAAGACGGGCGGAAAGTCCACGGC
CGCGAACATGGACGAGGCGATCGAGGCGGGAAGGAAAAGGGTACGTGGGA
GGGAGAGAGGGAGGGAGGGATAG
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Synonyms
Publications