rna7449, rna7449 (mRNA) Nannochloropsis gaditana

Overview
Namerna7449
Unique Namerna7449
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length411
Alignment locationCM002471.1:616069..617855 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101425g2.9070.mrna
Orig protein idgnl|cribi|Naga_101425g2.9070
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:616069..617855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101425g2gene7207Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23242.1cds7431Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7449rna7449-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7449 ID=rna7449|Name=rna7449|organism=Nannochloropsis gaditana|type=mRNA|length=411bp
ATGGGATCCAGAGGAGTGATGGACTCGGCGTCAAGGAATGATGGACTCAA
CGGCGCCCCTCCCTCCCAGAGGGGGGGGATATGGAAGGGTGAGGTTGTAG
AGACGCCTCTGTTGTATGCGTGCGATGTTTTAATGGCTATTTGGAAGAAA
AATGCACTGTATTGCTGGGAGGGAGGGAGGGAGGGAGGAAGGATGCCTGA
GGTGGAGAACCAAAAGTACTGCTTAAAATCCAGCCAATCGACCATTCGCA
TGAGTTTCTCCCTTTGTCCTCCCTCCCTTCCTCCCCCCTCCCTCCTGTGT
GGGCAAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGATGGAAAAGGAG
GGGGGGAAGACGCAAGGAGGGACAAAGTGTAATTAGGGCCCAATGTGTGT
GTGTTGTCTGA
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protein sequence of rna7449

>rna7449-protein ID=rna7449-protein|Name=rna7449|organism=Nannochloropsis gaditana|type=polypeptide|length=322bp
MLTSWPLLPLPSFALLLSPPPPFFPSRRPSSPSSSSPSSSTSGLSETTLA
APQTHRGRRRSGDGGRGRRRREGKRNGRWKPSSLPLLARAFLGAASKPSF
PPSLSHSLSSALPPSIPSTRSPYPSLLFLPPLPIVILTSAISHRPRPPSL
PPSLPPSLPPSLPPFLPPPLPPSTGILFFPLLAFLATIFVVSRQFLNREK
DDLSLYEDTTSALFPPSLPPSRPPSLPPSTPCSYRSITSTYRHPCAPSSF
ASSLPPYPPSSFCSPRSSRCVSPMPQSPPSAAGGREGGREGGREGGRPRR
INGRKVIWKEPSPAKALVMERD
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mRNA from alignment at CM002471.1:616069..617855-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7449 ID=rna7449|Name=rna7449|organism=Nannochloropsis gaditana|type=mRNA|length=1787bp|location=Sequence derived from alignment at CM002471.1:616069..617855- (Nannochloropsis gaditana)
ATGCTTACTTCCTGGCCCCTCCTTCCTCTACCGTCCTTCGCCCTCCTCTT
ATCCCCCCCGCCCCCCTTCTTTCCCTCGCGCAGGCCCTCCTCCCCCTCCT
CCTCCTCCCCCTCCTCCTCCACCTCTGGCCTCTCCGAGACCACACTCGCT
GCCCCTCAGACCCACAGGGGAAGGAGAAGAAGCGGCGACGGAGGCAGGGG
GAGGAGGAGGAGGGAAGGAAAGAGGAACGGAAGGTGGAAACCGTCCTCCC
TTCCCCTCCTCGCCCGAGCCTTCCTGGGCGCTGCAAGTAAGCCCTCCTTC
CCTCCCTCCCTCTCTCACTCCCTCTCTTCCGCCCTCCCTCCCTCCATTCC
TTCCACCCGCTCTCCCTACCCATCCCTCCTTTTCCTTCCCCCCCTCCCCA
TAGTCATTCTCACATCCGCCATCTCTCACCGACCTCGTCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTTCTCCC
TCCCCCTCTCCCTCCCTCGACAGGCATCCTCTTCTTTCCCCTCCTTGCCT
TCCTTGCCACCATATTTGTGGTTTCGCGCCAATTTCTCAACCGAGAAAAA
GATGACCTCTCCCTTTACGAGGACACCACCTCCGCGCTCTTCCCTCCCTC
CCTCCCCCCTTCCCGCCCTCCTTCCCTCCCTCCTTCCACCCCGTGCTCCT
ACCGGTCCATCACCTCCACCTACCGACATCCCTGTGCCCCGTCCTCCTTC
GCATCCTCCCTCCCGCCCTACCCTCCTTCCTCCTTTTGTTCCCCCCGTTC
CTCGCGGTGCGTCTCTCCCATGCCCCAAAGCCCTCCTTCCGCTGCCGGAG
GGCGGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGACGGCCTCGAAGA
ATCAACGGGAGAAAAGTGATATGGAAAGAGCCGTCTCCAGCCAAAGCTCT
GGTCATGGAGAGGGATTGAAAGAGAGGGGAGGGAGGAGGAGGGGAAGGAG
GGCTGTACAGAGATAGGGCGGGGGGTGGATGGTGATGTGTGGTTGATGTG
ACGGGAGAAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGACATTTCTTT
GTGTGTATGTGTGCGCCGTGCCAGACAATGTGAGAGGAAAAGAGATGGAG
GGAAAGAGGGCGGGAGGGAGATAGAAAGTGAGGAGGGAGGGAGAGAGGGG
GACGGAGAGAAAGCGTATGTGTGCCTACCACCTGTAAAAATTGACCGGGA
AAGGCAATTTAAGGGGAAAAAAGGCATAAACAGACCCCAAACCCTCTCGG
ATTGGTTGGGAAGGGCGAGCAGGGGAGGGAAGGAAAGGGGAAGGAGGAGG
ACGGGCGCGAGGAAGGAAAAAGAGGGCAAGAAAGACAAACCCGCGAACAA
AGTTAAGGTACCTAAAGAGGGCAAGAGAGAGAGGCCCCGTGCCCTCTGGC
CTGTCCGACCCCACCTACGGATCCTCCGGATGTGATGGATCTGGAAGGAG
GGTGGAGAGGCCGCGAACAAAGTTAAGGTACCTCCTCTGGCAGACAGCCA
CCCCCAAAAAATGACAGGCATGTGAACGAATCGCCTTGGTGATGTTGCCA
CCACCCATTTCGAGAGGCCCATGAAGGGGGGGAAAATAAAAGCCCGAGCT
TGAATGAAACGGCTCCGACGCGCCCCTTTCAACGCGTGCATGTCTCTCTT
ATGAAGCGTATATTTCCGGGCGGGGAATTCATTGTCCTCGTCCCTGTCAG
ACAACACACACACATTGGGCCCTAATTACACTTTGTC
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Coding sequence (CDS) from alignment at CM002471.1:616069..617855-

>rna7449 ID=rna7449|Name=rna7449|organism=Nannochloropsis gaditana|type=CDS|length=969bp|location=Sequence derived from alignment at CM002471.1:616069..617855- (Nannochloropsis gaditana)
ATGCTTACTTCCTGGCCCCTCCTTCCTCTACCGTCCTTCGCCCTCCTCTT
ATCCCCCCCGCCCCCCTTCTTTCCCTCGCGCAGGCCCTCCTCCCCCTCCT
CCTCCTCCCCCTCCTCCTCCACCTCTGGCCTCTCCGAGACCACACTCGCT
GCCCCTCAGACCCACAGGGGAAGGAGAAGAAGCGGCGACGGAGGCAGGGG
GAGGAGGAGGAGGGAAGGAAAGAGGAACGGAAGGTGGAAACCGTCCTCCC
TTCCCCTCCTCGCCCGAGCCTTCCTGGGCGCTGCAAGTAAGCCCTCCTTC
CCTCCCTCCCTCTCTCACTCCCTCTCTTCCGCCCTCCCTCCCTCCATTCC
TTCCACCCGCTCTCCCTACCCATCCCTCCTTTTCCTTCCCCCCCTCCCCA
TAGTCATTCTCACATCCGCCATCTCTCACCGACCTCGTCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTTCTCCC
TCCCCCTCTCCCTCCCTCGACAGGCATCCTCTTCTTTCCCCTCCTTGCCT
TCCTTGCCACCATATTTGTGGTTTCGCGCCAATTTCTCAACCGAGAAAAA
GATGACCTCTCCCTTTACGAGGACACCACCTCCGCGCTCTTCCCTCCCTC
CCTCCCCCCTTCCCGCCCTCCTTCCCTCCCTCCTTCCACCCCGTGCTCCT
ACCGGTCCATCACCTCCACCTACCGACATCCCTGTGCCCCGTCCTCCTTC
GCATCCTCCCTCCCGCCCTACCCTCCTTCCTCCTTTTGTTCCCCCCGTTC
CTCGCGGTGCGTCTCTCCCATGCCCCAAAGCCCTCCTTCCGCTGCCGGAG
GGCGGGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGACGGCCTCGAAGA
ATCAACGGGAGAAAAGTGATATGGAAAGAGCCGTCTCCAGCCAAAGCTCT
GGTCATGGAGAGGGATTGA
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Synonyms
Publications