EWM23255.1, cds7417 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|585104233|gb|EWM23255.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 294.664 bits (753), Expect = 4.838e-101 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 Query: 1 MRTAGTEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS 146 MRTAGTEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS Sbjct: 1 MRTAGTEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS 146
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|553177491|ref|XP_005852470.1| (hypothetical protein NGA_0727000 [Nannochloropsis gaditana CCMP526] >gi|422296063|gb|EKU23362.1| hypothetical protein NGA_0727000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 254.218 bits (648), Expect = 1.712e-83 Identity = 142/197 (72.08%), Postives = 142/197 (72.08%), Query Frame = 0 Query: 1 MRTAGTEIQAGDIKSIDANG---------------------------------------------------AKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS 146 MRTAGTEIQAGDIKSIDANG AKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKE RRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS Sbjct: 58 MRTAGTEIQAGDIKSIDANGQEGEREGGREGGREGGRGAKGAGEQAHVLAWPFQWLDCVRAPSLLVCAYSGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPRNMKERAEKE----RRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRANTAAGVSDEEAGGGGGGDGPS 250
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|298706347|emb|CBJ29356.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.6481 bits (200), Expect = 1.671e-16 Identity = 46/127 (36.22%), Postives = 76/127 (59.84%), Query Frame = 0 Query: 7 EIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQPR--------NMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 125 EI DIK+++ G+ S+ + SKTGD+LLE+EA + RD W+ +L V ED + Q R MK++A+++ + +R +++ +K EA+KA+++KE GG++YTAL MA R+ Sbjct: 82 EIDLNDIKTVEPKGSASLVMSSKTGDLLLELEAENGSVRDSWVESLQAV--------AEDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANRS 200
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|813156558|ref|XP_012201628.1| (hypothetical protein SPRG_20398 [Saprolegnia parasitica CBS 223.65] >gi|641533787|gb|KDO27760.1| hypothetical protein SPRG_20398 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 68.5514 bits (166), Expect = 1.772e-11 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 0 Query: 7 EIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQP-------RNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRAN 126 EI+ G IK++ G S +LS GDVLLE+EA R+ W+TAL V +G + P + +K++A K+ Y+ +RQ+ ELK++ EA++ K A G+KYTA+ MA R + Sbjct: 72 EIEVGAIKAVTPVGTTSFQILSMQGDVLLELEAESADMRNAWVTALQFVCEQVQSEQEANGSNKKGPATPTSLKQMVKDQAAKQAYWHKRQQ--ELKQREIEAEERKKKVGANGMKYTAIAMANRTS 196
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|1173951978|gb|OQR99743.1| (hypothetical protein ACHHYP_04650 [Achlya hypogyna]) HSP 1 Score: 67.781 bits (164), Expect = 3.127e-11 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 7 EIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLLHNFKVMGEDGVVRGQP-------RNMKERAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAGGLKYTALHMAGRA 125 EI+ G IK++ G S +LS GDVLLE++A R W+TAL V K +G + P + +K++A K+ Y+ +RQ+ ELK++ EA++ K G+KYTA+ MA R+ Sbjct: 70 EIEVGGIKAVLPQGPSSFQLLSMQGDVLLELDAESAELRTQWVTALQFVCEEVQKEQEANGTTKKAPVTPSSLKQMVKDQANKQAYWHKRQQ--ELKQREAEAEERKKKVGVAGMKYTAIAMANRS 193
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|567971482|gb|ETK96490.1| (hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567999812|gb|ETL49846.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570961517|gb|ETP26496.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 66.6254 bits (161), Expect = 3.788e-11 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 6 TEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLL-HNFKVMGEDGVVRG-QPRNMKE-RAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAG-GLKYTALHMAGRANTAA 129 T+I+ + I A G T++S+ GD LL++EA E RD W+T L V N E+ V G + R M E RA+K+ Y+ +R +++E +++ E +K KF AG G+KYTAL MA R + ++ Sbjct: 31 TKIELHTVNLIQAQGKIGFTIISQKGDTLLDVEADSEEIRDTWVTHLQMVCEDSNPDDETEEEVQSGLKFRKMVEDRAKKQAYWAKRTQELEQRKQEAEERKKKF---AGVGMKYTALAMANRPDPSS 155
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|567971481|gb|ETK96489.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567999811|gb|ETL49845.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570961516|gb|ETP26495.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 66.6254 bits (161), Expect = 6.031e-11 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 6 TEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLL-HNFKVMGEDGVVRG-QPRNMKE-RAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAG-GLKYTALHMAGRANTAA 129 T+I+ + I A G T++S+ GD LL++EA E RD W+T L V N E+ V G + R M E RA+K+ Y+ +R +++E +++ E +K KF AG G+KYTAL MA R + ++ Sbjct: 45 TKIELHTVNLIQAQGKIGFTIISQKGDTLLDVEADSEEIRDTWVTHLQMVCEDSNPDDETEEEVQSGLKFRKMVEDRAKKQAYWAKRTQELEQRKQEAEERKKKF---AGVGMKYTALAMANRPDPSS 169
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|567971480|gb|ETK96488.1| (hypothetical protein L915_00832 [Phytophthora parasitica] >gi|567999810|gb|ETL49844.1| hypothetical protein L916_00822 [Phytophthora parasitica] >gi|570961515|gb|ETP26494.1| hypothetical protein F441_00867 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 66.6254 bits (161), Expect = 8.926e-11 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 6 TEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLL-HNFKVMGEDGVVRG-QPRNMKE-RAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAG-GLKYTALHMAGRANTAA 129 T+I+ + I A G T++S+ GD LL++EA E RD W+T L V N E+ V G + R M E RA+K+ Y+ +R +++E +++ E +K KF AG G+KYTAL MA R + ++ Sbjct: 69 TKIELHTVNLIQAQGKIGFTIISQKGDTLLDVEADSEEIRDTWVTHLQMVCEDSNPDDETEEEVQSGLKFRKMVEDRAKKQAYWAKRTQELEQRKQEAEERKKKF---AGVGMKYTALAMANRPDPSS 193
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|675163217|ref|XP_008890493.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|566033747|gb|ETI56658.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|568028981|gb|ETM02915.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568059569|gb|ETM56144.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568109822|gb|ETN24429.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570998166|gb|ETP54424.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 65.4698 bits (158), Expect = 1.164e-10 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 0 Query: 6 TEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLL-HNFKVMGEDGVVRG-QPRNMKE-RAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAG-GLKYTALHMAGRANTAA 129 T+I+ + I A G T+ S+ GD LL++EA E RD W+T L V N E+ V G + R M E RA+K+ Y+ +R +++E +++ E +K KF AG G+KYTAL MA R + ++ Sbjct: 31 TKIELHTVNLIQAQGKIGFTITSQKGDTLLDVEADSEEIRDTWVTHLQMVCEDSNPDDETEEEVQSGLKFRKMVEDRAKKQAYWAKRTQELEQRKQEAEERKKKF---AGVGMKYTALAMANRPDPSS 155
BLAST of EWM23255.1 vs. NCBI_GenBank
Match: gi|570337456|gb|ETO85404.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1976]) HSP 1 Score: 65.0846 bits (157), Expect = 1.796e-10 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 0 Query: 6 TEIQAGDIKSIDANGAKSMTVLSKTGDVLLEIEAAEEAQRDLWLTALNEVLL-HNFKVMGEDGVVRG-QPRNMKE-RAEKELYFQRRQKDIELKRKSTEAKKAKFMKEAG-GLKYTALHMAGRANTAA 129 T+I+ + I A G T+ S+ GD LL++EA E RD W+T L V N E+ V G + R M E RA+K+ Y+ +R +++E +++ E +K KF AG G+KYTAL MA R + ++ Sbjct: 31 TKIELHTVNLIQAQGKIGFTITSQKGDTLLDVEADSEEIRDTWVTHLQMVCEDSNPDGETEEEVQSGLKFRKMVEDRAKKQAYWAKRTQELEQRKQEAEERKKKF---AGVGMKYTALAMANRPDPSS 155 The following BLAST results are available for this feature:
BLAST of EWM23255.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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