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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_102237g1.8318.mrna |
Orig protein id | gnl|cribi|Naga_102237g1.8318 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:564901..565883 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7428 ID=rna7428|Name=rna7428|organism=Nannochloropsis gaditana|type=mRNA|length=798bp CTGCGTGCCACGATCCAGTGCTTGCGTTCCTCTGACGGCTTTCTCCTTTC CTTCCTTCCCCTCCCTCCCTCCCTCCCTCCCCCCCCTCCCTCCCCCCTCT CTCTAGCCCCTCTTCCCCTTGCGCGATGCGGCGACCAAGACCATCGTCAC GTCGGGGGCCGAGCTGGCAGAGGAAGCGAGGAGGAGGAAGGGGTAGAGGG AAGGAGGGATGGGGGTTGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGG GGGACGCCCTCACCCTTTTTCTCTTGGTGACCTCGGGGGGAAGGTTTTTC CTTTCTGATTTTGCATTAGGATACAGCGTAGCAGCTTCTTACATACATGC GCATACATAGCGAAGAGGTGGTGGGTGGTGTCGATTGTGGCTTACAAAGT TCAGGGTGATAACGACGCGAGATGTTCCTGCCCGTGGGACCCTCGCCTCC TCCGGGTAGCTTTCCCCAGTCCCCTGGCTTGTGGGCGGGGCTCGACGGCG TCGAGGATGGCGTCGGCCCGATCCCTGGCTTCGATTGCTCGCTTCGATTG CTCGGTGCGCCATGTAGGACCGGGTGGTGGTGAGGGAGAGAGATCTCCTT GATTCCTGGGCGGCACCGGACATGGAGAGCAAGAGCGAGGCAGCGATGGG ATGGGAGGGCAATGACGGGGGGACGGGTTTGGGTACCTAAACCATCACAG AGAGAAAGAAATAGCGAGGCAGCGATCGGGGGAAGGACGGACTCTTCGTG TTTTCTTCCGTGACGCCACCTCATCCCTTCATCTCTGACATGGCCTCA back to topprotein sequence of rna7428 >rna7428-protein ID=rna7428-protein|Name=rna7428|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp GRYPAPTLPGRQHLAPLPPSLQSWRYTQTRVPGTSSALTWSTAMLPAGEW LYLVGVAGKGIDATQVPSLPPSLPSFLPFLLTPFSPLGFHRCWPAFRSPP SSLPPPFPPPLPPPLPPPRPPPRPPLTPSTPRPWKSGYIPLLPPPLPPPL PLPHPPAGSRSRPTWPQALPPLLPLLPSLPTSSPPSFHRVPWESPRLA back to topmRNA from alignment at CM002471.1:564901..565883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7428 ID=rna7428|Name=rna7428|organism=Nannochloropsis gaditana|type=mRNA|length=983bp|location=Sequence derived from alignment at CM002471.1:564901..565883+ (Nannochloropsis gaditana) GGACGTTACCCAGCTCCAACCTTACCGGGAAGGCAACAtcttgctcccct
ccctccctccctccagtcctGGCGCTACACCCAAACCCGCGTCCCGGGCA
CCTCCTCTGCTCTCACCTGGTCTACGGCTATGCTCCCTGCGGGGGAATGG
CTCTACCTCGTTGGAGTAGCGGGCAAAGGCATCGACGCCACCCAggttcc
ttccctccctccctccctcccttccttccttcctttcctgctcaccccct
tttcccccctcggtTTCCATAGGTGCTGGCCCGCCttccgctctcctccc
tcctcccttcctcctccctttcctcctccccttcctcctccccttcctcc
tccccgtcctcctccccgtcctccccttacGCCTTCAACGCCTCGTCCAT
GGAAGTCTGGGTacattcccctccttcctcccccccttcctcctcccctc
cctctcccccaccctcccgctGGATCCCGCTCCAGACCTACCTGGCcgca
agccctccctcctcttctccctctcctcccctccctccctacgtcctcac
ccccctctttccaccgGGTACCCTGGGAGTCACCGAGGCTGGCTTGATCT
TCCACGAGCGCCTGAATCGCTACTTGATGGTCACCCTCCCGGCTTTCGCC
AACAAggtgtcttcctccctttcctccctccctcccttcctccctccctc
ccttcctccctccctccctcccttcctcccttcctcctgcccatgtggcc
ttccctctcacccacTGGTCTCCACGCTCTAATGGTCACCCCACCATGTC
cggccctcgcctccctccctccctccctccctccctccctccctccctcc
ctccctcccgcggtAGCTCTACATGTGGACGAGCCCCTCTCTGACAGGGC
CTTGGGTGGCGACAGAGCTattggacgtggaggagttTGAGAAAGAATTT
CAGACGTTGAAGGTTCGGACGAGGGTctggcgg back to topCoding sequence (CDS) from alignment at CM002471.1:564901..565883+ >rna7428 ID=rna7428|Name=rna7428|organism=Nannochloropsis gaditana|type=CDS|length=597bp|location=Sequence derived from alignment at CM002471.1:564901..565883+ (Nannochloropsis gaditana) GGACGTTACCCAGCTCCAACCTTACCGGGAAGGCAACAtcttgctcccct ccctccctccctccagtcctGGCGCTACACCCAAACCCGCGTCCCGGGCA CCTCCTCTGCTCTCACCTGGTCTACGGCTATGCTCCCTGCGGGGGAATGG CTCTACCTCGTTGGAGTAGCGGGCAAAGGCATCGACGCCACCCAggttcc ttccctccctccctccctcccttccttccttcctttcctgctcaccccct tttcccccctcggtTTCCATAGGTGCTGGCCCGCCttccgctctcctccc tcctcccttcctcctccctttcctcctccccttcctcctccccttcctcc tccccgtcctcctccccgtcctccccttacGCCTTCAACGCCTCGTCCAT GGAAGTCTGGGTacattcccctccttcctcccccccttcctcctcccctc cctctcccccaccctcccgctGGATCCCGCTCCAGACCTACCTGGCcgca agccctccctcctcttctccctctcctcccctccctccctacgtcctcac ccccctctttccaccgGGTACCCTGGGAGTCACCGAGGCTGGCTTGA back to top
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