EWM23332.1, cds7370 (CDS) Nannochloropsis gaditana

Overview
NameEWM23332.1
Unique Namecds7370
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:464109..464345 +
Alignment locationCM002471.1:464488..464646 +
Alignment locationCM002471.1:464830..466254 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23332.1
ProductRegulator of chromosome condensation/beta-lactamase-inhibitor protein II
Orig transcript idgnl|cribi|Naga_100053g39.5072.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:464109..464345 +
CM002471.1supercontigCM002471.1:464488..464646 +
CM002471.1supercontigCM002471.1:464830..466254 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
Homology
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|585104339|gb|EWM23332.1| (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II [Nannochloropsis gaditana])

HSP 1 Score: 1234.55 bits (3193), Expect = 0.000e+0
Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILAKVPATFMDTARRKLEEAEAKYERRQEERRRAASEKGRGGEEEEELDMDEL 606
            MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILAKVPATFMDTARRKLEEAEAKYERRQEERRRAASEKGRGGEEEEELDMDEL
Sbjct:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILAKVPATFMDTARRKLEEAEAKYERRQEERRRAASEKGRGGEEEEELDMDEL 606          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|669142130|ref|XP_008606627.1| (hypothetical protein SDRG_02803 [Saprolegnia diclina VS20] >gi|530741911|gb|EQC40153.1| hypothetical protein SDRG_02803 [Saprolegnia diclina VS20])

HSP 1 Score: 359.762 bits (922), Expect = 2.585e-114
Identity = 221/559 (39.53%), Postives = 310/559 (55.46%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHET-VIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAP--GASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILA 556
            MKR+R+DG +SKE Y  +E++                GG        SS+     A+   + SRR V  +  +R++       ALN  F   +  Q +++   S  +N  EYL+YV +++GRY  K G + TFGS +CGQ  HG     D++V  PRVV AL  + +  + CG LH  A T DG VYTWGCNDDGALGR G E  P LV+     T +I V  GD HS+ L V+GSV+ WG YKDKEGK++ ++A+ +     KQ  P R+PGL ++ +I  G+S NLA  AD  V SWG+GE G+LGR ++ ++RA          EY+L  V+ +HL P  + L G +L    KAIG G  HS+ +      ++  GLNNYGQLGLGH  N+   + VE L  +    V  G H+S+ L    G +++FGR+DS QLG      +  P  GA +  P  ++  A+   +G+  F   +SCG   +LA TS N +Y+WG+G+M  LG     GEE  DE  PRLVD ++ +     G AR   +L+V+ G QHS I+A
Sbjct:    1 MKRTRVDGHLSKEEYASSEAT---------------AGG--------SSSGDHTLASDDVMRSRRVVTARSTERKRH----AYALNQNFYQGIKLQHAQNAKGSWVDNMAEYLAYVQEIEGRYGDKSGVIMTFGSGDCGQLGHGVDEDKDMIVSVPRVVAALSKQQIVRVGCGGLHTAAVTKDGNVYTWGCNDDGALGRTGDENAPALVTGFPANTSIINVVGGDCHSVALGVDGSVFMWGSYKDKEGKLWCDAATPKETFKNKQLTPFRIPGLSNIVDIDCGSSFNLARAADGHVFSWGLGEMGQLGRPVSDKIRAPS-------GEYDLPLVFNQHLKPALVLLNGKKLL--CKAIGCGSYHSLFIANETGGIYTTGLNNYGQLGLGHDANQIEPQLVEALSHKVGQAVAAGTHNSLVLMAD-GTMYSFGRADSGQLGT-----IDNPETGAMKESPQEIIVKAK---SGRVSFAK-ISCGSNHSLAVTSENDLYAWGYGDMCALG----TGEE-KDEYKPRLVDWTKTK----FGPAR---ILQVNAGGQHSAIVA 501          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|1173945285|gb|OQR93933.1| (regulator of chromosome condensation (RCC1), partial [Thraustotheca clavata])

HSP 1 Score: 347.821 bits (891), Expect = 8.534e-110
Identity = 222/557 (39.86%), Postives = 300/557 (53.86%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHET-VIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILA 556
            MKR+ +DGQVSKE Y  A++S ++T  +G                      SF +A+   + SRR V   +   RK +     ALN  F   +  Q  ++   S  EN  EYLSYV +++GRY  K G VF FGS +CGQ  HG     D++V  PRVV AL  + +  + CG LH  A T +G VYTWGCNDDGALGR   E  P LVS     T +I V  GD H++ L V+GSV+ WG YKDKEGK++ ++ + +     KQ  P  +PGL ++ +I+ G+S NLA  AD  V SWG+GE G+LGR ++ ++R           EY+L  V+  HL P  + L G +L    KAIG G  HS+ V +    ++  GLNNYGQLGLGH  N+   + VE L  +    V G  H S+ L    G L++FGR+DS QLG        A GA +  P  ++   +    G       ++CG    LA +S N +YSWG+G+M  LG     GE+  DE  PRLVD ++ +     G AR    L+VD G QHS ILA
Sbjct:    1 MKRALVDGQVSKEEY--AKASAVSTNGFG----------------------SFSKASSDIIRSRRIVSATRTTERKRH---AYALNQSFYQGIKLQHLQNAKGSWIENMKEYLSYVQEIEGRYGDKSGVVFAFGSGDCGQLGHGVDEDEDMIVSVPRVVAALEKEQIVRVGCGGLHTAAVTKNGAVYTWGCNDDGALGRTEDENFPGLVSGFPGNTSIINVVGGDCHTVALAVDGSVFMWGSYKDKEGKLWCDAPTPKETFKNKQLTPYNIPGLANIVDIKCGSSFNLARAADGHVFSWGLGEMGQLGRPVSQKIR-------DASGEYDLPLVFNHHLKPALVLLNGKKLL--CKAIGCGSYHSLFVASESGGIYTTGLNNYGQLGLGHDVNQVEPQLVETLSHKVGLAVEGMTHSSVVLMA-DGTLYSFGRADSGQLGTIDNP---ATGAMKESPQEIIVKDK----GVRLVFEKLACGSNHALAVSSKNNIYSWGYGDMSALG----TGED-KDEYKPRLVDWTKTK----FGPAR---TLQVDAGGQHSAILA 501          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|953489895|emb|CEG47261.1| (FOG: RCC1 domain [Plasmopara halstedii])

HSP 1 Score: 343.969 bits (881), Expect = 6.020e-108
Identity = 211/564 (37.41%), Postives = 304/564 (53.90%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDV--RHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDG-GGARGF---EVLKVDGGAQHSVILAKV 558
            MKR R+D  VSK+ Y   E+S                   V  A + S    F RA+   L +RR V  K   R +E    + ALN  F A +  Q + +   S  +N  EYL+Y  ++D ++  + G++ TFGS +CGQ  HG     D++   PRVV++L    V  +ACG LH+ A T+ G VYTWGC+DDGALGR G E  P  V     +    I V  GD H+ V+T+ G VY WGCY+DKEGK + ++ S++    RKQT P  +  L+++ ++R G+S NL    D  V SWG+GE G+LGR +       +AE    K +Y++  V+++HL P+P+ L    L   VKAIG G  HS+  ++    +++ GLNNYGQLG+G+ +N   L+ VE L  + +  V GG HHS+ L    G ++ FGR+DS QLG+  +      G  +  P  V   +    +     V  V+ G    LA T SN+++SWG+G+M  LG+   R     DE  PR +D S+A  G D  G  + F   E+L V+ G QHS +LA+V
Sbjct:    1 MKRGRVDVGVSKDQY---EASL------------------VAPAIKDSVPDVFPRASTQVLKARRIVTVKPTSRAQEAARQLAALNRAFVANLKAQWTHNKRESWEQNMKEYLNYAREIDAKFGARYGQILTFGSGDCGQLGHGVEMDDDLMAKVPRVVHSLAKLKVARVACGGLHSAAITASGEVYTWGCDDDGALGRDGDENVPTKVGMFGPQDAIAIQVVGGDCHTAVVTLAGEVYTWGCYRDKEGKQWCDARSAKDAFKRKQTRPFLIKALDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGREV-------DAEMKDAKGDYKVDMVYRDHLQPKPVMLGKDPLPV-VKAIGCGSYHSLFAVSANGYLYSCGLNNYGQLGIGNTDNSSELQLVEDLSSKNVAFVDGGTHHSVVLTN-DGDVYTFGRADSGQLGVLES---CCTGEFKDRPQKVTISSHNKSSSS--VVRMVTSGSNHVLALTESNEIFSWGYGDMFALGNGVDR-----DENKPRQLDWSKAISGKDKEGKDQQFGKAEILLVEAGGQHSAVLARV 524          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|813174799|ref|XP_012204958.1| (hypothetical protein SPRG_10442 [Saprolegnia parasitica CBS 223.65] >gi|641530228|gb|KDO24365.1| hypothetical protein SPRG_10442 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 342.043 bits (876), Expect = 1.251e-107
Identity = 206/530 (38.87%), Postives = 293/530 (55.28%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRHET-VIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAP--GASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQ 527
            MKR+R+DG +SKE Y  +E++                GG  G+ + AS            + SRR V  +  +R++       ALN  F   +  Q +++   S  +N  EY++YV +++GRY  K G + TFGS +CGQ  HG     D++V  PRVV AL  + +  + CG LH  A T DG VYTWGCNDDGALGR G E  P LV+     T +I V  GD HS+ L V+GSV+ WG YKDKEGK++ ++A+ +     KQ  P  +PGL ++ +I  G+S NLA  AD  V SWG+GE G+LGR ++ ++RA          EY+L  V+ +HL P  + L G +L    KAIG G  HS+ + +    ++A GLNNYGQLGLGH  N+   + VE L  +    V  G H+S+ L    G +++FGR+DS QLG      +  P  GA +  P  ++  A+    G   +   +SCG   +LA TS N VY+WG+G+M  LG     G++  DE  PRL+D ++
Sbjct:    1 MKRTRVDGHLSKEEYASSEAT--------------AGGGGSGDHALASD---------DVMRSRRVVTARSTERKRH----AYALNQNFYQGIKLQHAQNAKGSWVDNMAEYMAYVQEIEGRYGDKSGVIMTFGSGDCGQLGHGVDEDEDMIVSVPRVVAALSKQQIVRVGCGGLHTAAVTKDGDVYTWGCNDDGALGRTGDENAPALVTGFPANTSIINVVGGDCHSVALGVDGSVFMWGSYKDKEGKLWCDAATPKETFKNKQLTPFSIPGLSNIVDIDCGSSFNLARAADGHVYSWGLGEMGQLGRPVSDKIRAPS-------GEYDLPLVFNQHLKPALVLLNGKKLL--CKAIGCGSYHSLFIASETGGIYATGLNNYGQLGLGHDANQIEPQLVEALSHKVGQAVAAGTHNSLVLMA-DGTMYSFGRADSGQLGT-----IDNPETGAMKESPQEIIVKAK----GGRVYFAKISCGSNHSLAVTSENDVYAWGYGDMCALG----TGDD-KDEYKPRLLDWTK 479          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|675207145|ref|XP_008912457.1| (hypothetical protein PPTG_16624 [Phytophthora parasitica INRA-310] >gi|566013966|gb|ETI36877.1| hypothetical protein F443_17123 [Phytophthora parasitica P1569] >gi|567951344|gb|ETK77046.1| hypothetical protein L915_16651 [Phytophthora parasitica] >gi|567980007|gb|ETL30477.1| hypothetical protein L916_16556 [Phytophthora parasitica] >gi|568009537|gb|ETL83739.1| hypothetical protein L917_16378 [Phytophthora parasitica] >gi|568039415|gb|ETM36910.1| hypothetical protein L914_16484 [Phytophthora parasitica] >gi|568087549|gb|ETN02420.1| hypothetical protein PPTG_16624 [Phytophthora parasitica INRA-310] >gi|570317604|gb|ETO65552.1| hypothetical protein F444_17155 [Phytophthora parasitica P1976] >gi|570941464|gb|ETP06721.1| hypothetical protein F441_16983 [Phytophthora parasitica CJ01A1] >gi|570971640|gb|ETP34759.1| hypothetical protein F442_16982 [Phytophthora parasitica P10297])

HSP 1 Score: 336.265 bits (861), Expect = 6.306e-105
Identity = 212/563 (37.66%), Postives = 294/563 (52.22%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDV--RHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQA----RGGGDGGGARGFEVLKVDGGAQHSVILAK 557
            MKR R+D  VSKE Y   E+S               P GP  EA       SF RA    L +RR V      R +E    + ALN  F + V  Q + +   S  +N  EYLSY  ++D ++    G++ TFGS +CGQ  HG     D+++  PRVV  L    +  +ACG LH+ A TS G VYTWGCNDDGALG  G E  P  V+    +  T + V  GD H+ V+T+ G VY WGCY+DKEGK + ++ S++    +KQ  P  +  L+++ ++R G+S NL    D  V SWG+GE G+LGR +  +++         K +Y++  V+ EHL P+P+ L    L   VKAIG G  HS+  ++    +++ GLNNYGQLG+G  EN   L+ VE L  + +  V GGAHHS+ L    G ++ FGR+DS QLG          G  +  P  V  P  + G      V  V+ G    LA T SN ++SWG+G+M  LG+   R     DE  P  VD S+A       G+       E L+V+ G QHS +LA+
Sbjct:    1 MKRGRVDVGVSKEQY---EASLTA------------PSGPSDEA------GSFPRAPTQVLKARRIVTATPTSRTQEAARQLAALNRAFVSNVKAQWAHNKADSWVQNMKEYLSYAREIDAKFGAHAGQMLTFGSGDCGQLGHGVEDEEDLMIKFPRVVSPLAKLQIVRVACGGLHSAAITSAGEVYTWGCNDDGALGHLGDENIPAKVAGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQPEPFLIKSLDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKMKDS-------KGDYKVDMVYTEHLQPKPVMLGNNPLP-AVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTN-DGDVYTFGRADSGQLGTLETCNT---GEFKDRPQKVTIPKPKNGGSSE--VRMVASGSNHALALTESNAIFSWGYGDMLALGNGVDR-----DENKPYQVDWSKAILGKDKEGEEEEFGKAEFLQVEAGGQHSAVLAR 523          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|698809118|ref|XP_009837588.1| (hypothetical protein H257_12165 [Aphanomyces astaci] >gi|574107289|gb|ETV72802.1| hypothetical protein H257_12165 [Aphanomyces astaci])

HSP 1 Score: 334.339 bits (856), Expect = 1.975e-104
Identity = 216/565 (38.23%), Postives = 297/565 (52.57%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDVRH-ETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTG---VSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVILAKVPAT 561
            MKRSR+D  +SKE Y + ES    T  +GQ             A  +      +R   + +AS R  + K    R  Y     ALN  F   +  Q S++   S  EN  EYLSY  ++DGRY   +G + TFGS +CGQ  HG     D+ V  PR V AL    +  +ACG LH +A T +G V+TWGCNDDGALGR G E  P  V+      T++ +  GD H+  + V+GSV+ WG YKDKEGK++ +  S      +KQ  P  +P L +V ++++G+S NLA  AD  V SWG+GE G LGR ++ E+R           EY+L  V+ +HLTP+ ++L G     G KA+GAG  HS+ V      +++ GLNNYGQLGLGH  N+  L+ VE L  +    V GG HHS+ L    G L+ FGR DS QLG     G    GA +  P  +          K P VTG   V+CG    LA T  + +YSWG+G+M  LG+   +     DE  PR +D ++ + G         ++L+V  G QHS ++A+   T
Sbjct:    1 MKRSRVDIGLSKEQYADDESKDEVTHGFGQ------------HAKASDEVMRGRRVVKAVVASTRLTELK----RHTY-----ALNQSFYQGIKLQSSQNAKESWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEDIDMCVKFPRPVQALSMHRIARVACGGLHTMALTHEGSVFTWGCNDDGALGRIGDENLPGQVTGFPEGTTIVTIVGGDCHTTAVAVDGSVFTWGSYKDKEGKLWCDGPSPNDTFKKKQLTPYLVPTLANVVDVKSGSSHNLARCADGHVYSWGLGEMGNLGRPVSTEIRDAH-------GEYKLSVVFNDHLTPQLVKLNGKPF--GCKALGAGSYHSLFVANDSGGIYSCGLNNYGQLGLGHDVNQTELQLVEALGSKNGLFVEGGTHHSVVLV-TDGTLYTFGRGDSGQLGTLDDPGT---GAFKDSPQEI----------KVPGVTGFRAVACGSNHALAVTDQDAIYSWGYGDMLALGNGVEK-----DELKPRRIDWTKTKFG-------AAKILQVAAGGQHSAVVAEKATT 509          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|970651232|gb|KUF90081.1| (Regulator of chromosome condensation [Phytophthora nicotianae])

HSP 1 Score: 334.724 bits (857), Expect = 2.431e-104
Identity = 211/563 (37.48%), Postives = 293/563 (52.04%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDV--RHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQA----RGGGDGGGARGFEVLKVDGGAQHSVILAK 557
            MKR R+D  VSKE Y   E+S               P GP  EA       SF R     L +RR V      R +E    + ALN  F + V  Q + +   S  +N  EYLSY  ++D ++    G++ TFGS +CGQ  HG     D+++  PRVV  L    +  +ACG LH+ A TS G VYTWGCNDDGALG  G E  P  V+    +  T + V  GD H+ V+T+ G VY WGCY+DKEGK + ++ S++    +KQ  P  +  L+++ ++R G+S NL    D  V SWG+GE G+LGR +  +++         K +Y++  V+ EHL P+P+ L    L   VKAIG G  HS+  ++    +++ GLNNYGQLG+G  EN   L+ VE L  + +  V GGAHHS+ L    G ++ FGR+DS QLG          G  +  P  V  P  + G      V  V+ G    LA T SN ++SWG+G+M  LG+   R     DE  P  VD S+A       G+       E L+V+ G QHS +LA+
Sbjct:    1 MKRGRVDVGVSKEQY---EASLTA------------PSGPSDEA------GSFPRTPTQVLKARRIVTATPTSRTQEAARQLAALNRAFVSNVKAQWAHNKADSWVQNMKEYLSYAREIDAKFGAHAGQMLTFGSGDCGQLGHGVEDEEDLMIKFPRVVSPLAKLQIVRVACGGLHSAAITSAGEVYTWGCNDDGALGHLGDENIPAKVAGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQPEPFLIKSLDNIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKMK-------DSKGDYKVDMVYTEHLQPKPVMLGNNPLP-AVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTN-DGDVYTFGRADSGQLGTLETCNT---GEFKDRPQKVTIPKPKNGGSSE--VRMVASGSNHALALTESNAIFSWGYGDMLALGNGVDR-----DENKPYQVDWSKAILGKDKEGEEEEFGKAEFLQVEAGGQHSAVLAR 523          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|301111610|ref|XP_002904884.1| (regulator of chromosome condensation (RCC1)-like protein [Phytophthora infestans T30-4] >gi|262095214|gb|EEY53266.1| regulator of chromosome condensation (RCC1)-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 332.798 bits (852), Expect = 1.201e-103
Identity = 207/569 (36.38%), Postives = 297/569 (52.20%), Query Frame = 0
Query:    1 MKRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAAS------FQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDV--RHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGF----EVLKVDGGAQHSVILAK 557
            MKR R+D  VSKE Y                           EAS A+ A S      F RA    L +R+ V        +E    + ALN  F A +  Q   +   S  +N  EY+SY  +++ ++    G++ TFGS +CGQ  HG     D++V  P VV  L    +  +ACG LH+ A TS G V+TWGC+DDGALGR G E  P  V+    +  T + V  GD H+ V+T+ G VY WGCY+DKEGK + ++ S++    +KQT P  +  L+++ ++R G+S NLA   D  V SWG+GE G+LGR +  +++         K +Y++  V+ +HL P+P+ L    L   VKAIG G  HS+  ++    ++  GLNNYGQLG+G+ EN   L+ VE L  + +  V GG+HHS+ L    G ++ FGR+DS QLG+       + G  +  P  V  P  + G  +   V  +S G    LA T SN ++SWG+G+M  LG+   R     DE  P  VD S+A  G D  G +      E L+V+ G QHS +LA+
Sbjct:    1 MKRGRVDVGVSKEQY---------------------------EASLAAPADSHDEVGPFPRAPTQVLQARKIVLATPTSCSQEAARQLAALNRAFLANLKAQWVHNKTDSWTQNMKEYISYAREINAKFGAHAGQMLTFGSGDCGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVFTWGCDDDGALGRVGDENIPTKVTGFGPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDAFKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDDQMK-------DFKGDYKVDMVYNDHLQPKPVTLGNDPLPV-VKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLT-IDGDVYTFGRADSGQLGMLE---TCSTGDFKDRPQKVTIPKPKDGGSRQ--VCMISSGSNHTLALTESNAIFSWGYGDMLALGNGVDR-----DENKPYQVDWSKATNGKDKKGKKMVFGKAEFLQVEAGGQHSAVLAR 523          
BLAST of EWM23332.1 vs. NCBI_GenBank
Match: gi|325190927|emb|CCA25412.1| (regulator of chromosome condensation (RCC1)like protein putative [Albugo laibachii Nc14])

HSP 1 Score: 332.798 bits (852), Expect = 1.491e-103
Identity = 203/558 (36.38%), Postives = 297/558 (53.23%), Query Frame = 0
Query:    2 KRSRMDGQVSKEAYYEAESSFITTLPYGQSANGELPGGPVGEASQASSAASFQRATPSTLASRRFVKPKKLDRRKEYLEAVKALNGRFQAWVVDQVSRDPGVSLCENALEYLSYVTQLDGRYLRKQGEVFTFGSSECGQCAHGDRSASDILVVAPRVVYALRGKNVCNIACGALHNVATTSDGRVYTWGCNDDGALGRGGHEAEPHLVSDV----RHETVIGVAAGDSHSLVLTVEGSVYGWGCYKDKEGKMFFNSASSEREILRKQTGPMRLPGLEHVREIRAGASTNLALLADSTVVSWGIGESGELGRAITLELRAEEAEEDGGKAEYELYRVWKEHLTPRPMQLAGGRLATGVKAIGAGYNHSMVVMAVRAEVWAAGLNNYGQLGLGHRENRYLLEHVEGLDGRGITEVTGGAHHSMALAGPTGKLFAFGRSDSSQLGIGRAGGVLAPGASEALPVPVLFPAREAGTGKPPFVTGVSCGGTFNLATTSSNQVYSWGFGEMGQLGHRPARGEETSDEPCPRLVDMSQARGGGDGGGARGFEVLKVDGGAQHSVIL 555
            KRSR+DG +S+E Y  AE      L   Q   G+ P                 R+T S   +++      L + ++Y   V ALN  F   +  Q+ ++P  S  +N  EYL ++ ++  +   + G++ TFGS +CGQ AHG     D++V+ PRVV  L   ++  I+CG LH  A + DG VYTWGCNDDGALGR G E  P  VS      +H+ +  V AGD H+L LT  G V+ WGCYKDKEGK++ ++ ++ +    KQT P+ + GLE + ++R G+  NLA  +  TV SWG+GE G+LGR   L ++ E         +Y+   V+ +HLTP  + L G    + VK +G G  HS+ V+     ++A GLNNYGQLG+G+  N   L  VE L    + +V GG HHS  L    G+++ FGR DS QLG+         G  +  P  V+   +   T    ++T +SCG    +A +  NQV+SWG+G+M  LG+   R E   DE  P+ +D S+   G       G  +++ + G QHS +L
Sbjct:    3 KRSRLDGGISREEYNAAEMRTEIELSPFQGEKGQYPDNT-------------DRSTFS-FGAKKSAHSTNLTKSQQYSRNVLALNDSFCQILHAQLHKNPTSSWEDNMREYLHFLREIKLKLGSQCGKILTFGSGDCGQLAHGVDEDDDMIVMYPRVVQRLADISISFISCGGLHTAAISVDGSVYTWGCNDDGALGRNGEENFPAKVSGFGPLEKHQAIQAV-AGDCHTLALTSSGEVFTWGCYKDKEGKLWCDAPNAGKAFKNKQTEPVLIHGLEDISDVRCGSCFNLARTSCGTVFSWGLGEQGQLGRKADLNMKNEH-------DKYDTKLVFDQHLTPARVTL-GTESLSDVKTMGCGAYHSLFVVGGNGYLYACGLNNYGQLGIGNTCNSSDLALVEDLVAHNVMQVEGGTHHSAVLT-VGGEVYTFGRGDSGQLGMLDE---CTSGNYKDRPQKVVMDPKAKNT----YITSISCGSNHAIALSKDNQVFSWGYGDMMALGN--GRDE---DELKPKKIDSSKFDSG-------GMNIIQAEAGGQHSALL 517          
The following BLAST results are available for this feature:
BLAST of EWM23332.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104339|gb|EWM23332.1|0.000e+0100.00Regulator of chromosome condensation/beta-lactamas... [more]
gi|669142130|ref|XP_008606627.1|2.585e-11439.53hypothetical protein SDRG_02803 [Saprolegnia dicli... [more]
gi|1173945285|gb|OQR93933.1|8.534e-11039.86regulator of chromosome condensation (RCC1), parti... [more]
gi|953489895|emb|CEG47261.1|6.020e-10837.41FOG: RCC1 domain [Plasmopara halstedii][more]
gi|813174799|ref|XP_012204958.1|1.251e-10738.87hypothetical protein SPRG_10442 [Saprolegnia paras... [more]
gi|675207145|ref|XP_008912457.1|6.306e-10537.66hypothetical protein PPTG_16624 [Phytophthora para... [more]
gi|698809118|ref|XP_009837588.1|1.975e-10438.23hypothetical protein H257_12165 [Aphanomyces astac... [more]
gi|970651232|gb|KUF90081.1|2.431e-10437.48Regulator of chromosome condensation [Phytophthora... [more]
gi|301111610|ref|XP_002904884.1|1.201e-10336.38regulator of chromosome condensation (RCC1)-like p... [more]
gi|325190927|emb|CCA25412.1|1.491e-10336.38regulator of chromosome condensation (RCC1)like pr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7387rna7387Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications