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Properties
| Property Name | Value |
|---|
| Product | lysine-specific demethylase 8 |
| Orig transcript id | gnl|cribi|Naga_100053g33.5047.mrna |
| Orig protein id | gnl|cribi|Naga_100053g33.5047 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002471.1 | supercontig | CM002471.1:452333..455992 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7379 ID=rna7379|Name=rna7379|organism=Nannochloropsis gaditana|type=mRNA|length=3039bp
CCCTTGCCCGGCGCCCGCGCCCTGAATGACGGACACAGAGGCCAGATGCT
GCCCTAGCGCCTTGCATGACTGTTTCGTGTGGTACACATGTCTCTGCTCG
CTCGTCCTGTAGACGCAGTGCACGCGAAGTGGGTCCATGCATGTCAGCTG
AAGTAGCATAAATATCCACATCTAAATTGGGCCTCACTAGTGGCTGCTTT
CTCTACAACAACAAAAAAGCTACCAGACCACGAGGAAACCTCATGGGATT
TGACTTCATAAAAATGTCAGGGAGCTTATTTCGTCAAGCTGTGAGGCCCC
TGACTTCGACTGTGCCTCAAGCCTCGGACAATTTCGACGACAGGAATGGC
AGTGCACCTAGCTGTACCAAGCTAAACGAGTATATCACTTTAGAACAGCC
TGATCGGCCAGAAGAAATGGCAGAGGAAACTCTTCGACAGGAGGCTTGGA
ATGAAGGGCAAGACCAAGACCAAGCCAATCCGCCAAGACAGCGGGCGCCC
TCGACCCCTGACCGGAGGTGCTACCTCGTGCATGAGGAGGAGAGATTGCG
AGGTGATTGCGAGGGCGATAGTGTCCCTTTGAAACGTCAGTCGGATGAAT
GTAGGTCAGAAACAGGCTATGTGATGGTCCAACGGCCATGCTCGTCGTCG
GAACTGGATAAACATATGAGTCAAGAGGCGAAGGATGCTCTCCAAGAGGC
GCCGGGTAAGGTGGCAGGAGATGCCGAGGCGGAACTTTCGGGCCCACCGT
GGACTGCCAAGCTTTCTCCGGATTGCGGTTTCAAAAGCCAAGCATGCGAC
GGGGCGCCAGAAGAGGAGGAAAAGACTTCCCTGTCGGCCCCTGCGCTGCC
CGCAGTCATCCCCCCTGTACCCGAGCAGGTTCCTGCCCCCTCCACCCCGT
CCGAGACGTCTGCTTTGAGAGAAGAGAGCGAGCACCCTCCCTTCAGGAAT
AGGGGCATCAGCAACAAACCGCGGCGCGGGTCGCCTTTAAAATTGTCCCC
CCCCACGAGCCTGGGAGAGGCGCCGGTCATGAGGAAGCTAATCCCCCTGG
AAACGGGCTGGGCCCCCAAGGTCCGCTTCGTCATGGCGACCTCGGCCCGG
GACTCGGAGACGCCGCTCTCGGTCATCAAGTCCGTGTCGAATGCGCTCTC
CATACAGACCACGCCCGATGGGCAGAGCATCGAGGTGGTGGCCAGGTCCT
GGCAGGAGCTGAAGGAGGCCGAGGCCCTGCTCCGGCTCGTCTTCCAGTAC
TACAAGGGAGAGGGGAAGTGGTGGCTCTACACCATTCCCACCTTCGTCTC
CTGCATCATCGCCGGGATCGAGGGCACGGAGCTCCCTCAGTTCTCGAACC
CGGCCCTGGGCTTGCACTGCGCAATCGCTCCCTACGATGCCGCCTCCACG
CGTCGAGCCTTCTTCTTGACCTGCCCGGAATGGGGGCCCCAGAACGCGGC
CTACCACTTCATCCGCCGGTGCTGGGAGTACTGGAAGGACCTGGGCTTGG
AGCGGCAGCTGGACCGGTACCTGTCGGTGCTCTTGGGGGTGGTGGTGGTG
CCCATCCGGGCGGACGGGAACTGTCTGTTCCGAGCCCTCGCAAAGAGCGT
TTTGGGGGCGGAGGGGCAGCACTTGCAGGTGCGGCGAGAGGTCGTGCAGT
TTATGCGCACGTCGGAGGAGCTGAGAGGCTTCATCGTGGCGGAGGATGAG
GGAGAGGACGATGCGGCCTTTGCGGAGCGGTATTTCGCGGAGATGGAGCA
GGATGGGACGTGGGGAGACCAAGTGGAGATCACGGCTTTCACGCGCGTCT
ACCGGCGTGCCGTCCGCGTCTGGAGCTACAACTACACAGAGGCGCGCCTC
CTTTCAGTAGTTACACCCCTCAACGAGGCCACGGCAGGCAGTCACGGGGG
AGCGGGGGGCGATGCAGGCGGGGAGGGGAGGCTAGCTGGCGCCGGGGCAA
GGGGCACCCGAGGGCCGGGGGAAGAGATCTGGCTTCTGCACTTGCACGGG
CATTACTCCCTGCTGGAGGAGGGCAAGCCGCCCAGAAACGAGGAGTGGGA
GCAGATGCTGCGGGAATGGGGAGAGGAGAAGGACGAACGCACCAATGTTC
TCAGCTCCCCGCGGTGGGAGCCGCAGGAGGCGACGGAGGACATGGAGGCC
GACGAGGAGAGGGCTGAGAGGGCCGAAAACATTGAGAGACAGGGAAGGCG
AGAATTTGAAAGAGATTGCGAAAAAGATGCGACCAAGGAGGGGTCAAGAG
GGGTGCAGCCGATTCGGATGGATGAGGAGAGCGACCTCGGCTCTGCTTCT
CGCAGAGGCACTGAGGGGCCCTAGATAGGGGGAAAGGATTGGTCGCGACG
AAGGGACAGCACATTTGAAGCTAAAGGACAGGAGGAAGGCATTTGGAACA
GATGTCGGTGCGAGCCATGTGGAGGAGCAAGGGAGGCAGGGAATAAGCAC
AGGCTGTTGGTGTACTGAAACCTGTGGCTGCTTGGGAGTGAGGTAGGTAT
TATACTATACATAGGTTTCAGACGCAATCCCTGAAAGCGTGCCAAGACTA
ATGTCGGCAAGGATTAAGCAGGCAAAGGTCGCCGGCTCGAGTGAGGGGGC
AACCGCCCGAAGTGTGTACATGCTGAGACCGTGAAGGGGGGAGAAGTTCG
GGGGAAAGGGACCGGAAGTGGAGGCATTGGTGTGCTCCGTATACATAGCT
GAATAGCGGGCCAGATAAGGAGTACTGACTGACCTTCAACGAAACAGATC
GACGAGGGCTGTGCCCTAGGATATACGAAGGCAACATCTGTTAGGGTTAC
CCTAACCCTGACCCTAGGCCTAACATCTAATTTCTTCTTGTTGGGCGATA
TCTCTTCTCAGTCCTGCAGGCACACGCGTTAATTATTGGCATGGGTTGTG
CCCCCACCTTCCTTAGATTCTATGCACACCCTCCAGTTCGTATATAACCA
ATCCCAGTCGAAAGTAAGGTGACTGCCTCGAGGCCCGTCCACACTCCCCT
CCCGACCCCTGTTCACACGCCACGACCCTCTTCCAATCC back to topprotein sequence of rna7379 >rna7379-protein ID=rna7379-protein|Name=rna7379|organism=Nannochloropsis gaditana|type=polypeptide|length=480bp
MECLADFPAWRIALEEPHELCQDLRQEGSLLCGSLCAGCTNSIQAGDWTT
VEALGRELEEVAWEGLHSSPAWRDVTVTTRRVYAYSQFILAAVQAVKFQQ
EEDTDTNTSTQKRSSVVSTRLKECIRRIDMALLMGPPSIKGVANGLIEWA
EQRLRPCKPEAAQFLSSRPRELRVKRPRPVEGLVGDIPRLACPSLDAFLE
KHMVPQVPVILTQCMEHWPALRRWRDMDYLKEVAGERVVPVEVGSGTYMA
GEGEGLEEEGAWGQELMPLGDFIDRYMTGAESGPESREGDASSAGPGGQT
WADGGEVEAGRRETGCRAYLAQHELFEQIPALQKDVWVPDYCALEVEGGE
EALEEDGLVVTNAWFGPGGTVSPTHTDPYHNLLAQVVGSKAVRLFAPSES
PCLYPCQGLLRNNSRVDPLRPDLARFPLFARANSQTCVLEEGEMLYIPPL
WWHHIQALSPSFSVSFWWGRRREGADPAPG back to topmRNA from alignment at CM002471.1:452333..455992- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7379 ID=rna7379|Name=rna7379|organism=Nannochloropsis gaditana|type=mRNA|length=3660bp|location=Sequence derived from alignment at CM002471.1:452333..455992- (Nannochloropsis gaditana)
ACTCTGCAAGAGGCAATGCGAGCCCTCACTTTCGCAGGATCCTCTCCGCT
GCCTTTCCCAGGATTAATCTTTTTGGAGGAACTACCGCCGAAAACTCCCC
AATACAGATTGAGTGTTCTCCGACGACCATTGTGTTGCCGGTAGAGACCG
GGAGCAGGGCATATGAAAGGTGTCAGAGTACATACGGGTCGCCTACTTGC
TTCAGCGGTTCTTGTGGAGAATAATAGAGCGAGACACCAACAGATTATCA
ACAGCATGTTTACAGGCATCGTAATAAGTCCCATCGTCTCTTTTCCTATG
TAGTGAATGTGGTCGTATGATGGAATTATTTGAGCTAGCACAGCGGGATG
GATGAAAGCGTAAGTGCCTGTCTGTACTGGTCGGGGGGGAGGTAGAGCTT
GCAATCAGGCCTTCGTTCCATTTCGTACTTCAAAATGTTCAAGAGCGGCA
CACCATTCACAAGCAGACATTATGGAATGCCTTGCTGATTTTCCAGCTTG
GAGGATTGCACTTGAGGAGCCTCATGAGCTTTGTCAAGGTAATCTAGCAC
CCTGCAACCTCTCCTCTACTTCCTCTCACGCGATACCCTCCCTTCCGTGT
CTCTCACTCTTTGCTTGGCTGTCAAGACCTTCGGCAAGAAGGGTCTCTTT
TATGCGGTTCATTGTGCGCCGGCTGTACAAATTCAATCCAAGCCGGTGAT
TGGACGACTGTCGAAGCTCTGGGCCGGGAGCTTGAGGAGGTGGCGTGGGA
GGGTTTACACAGCAGCCCCGCATGGCGCGATGTCACAGTAACCACCAGAA
GAGTGTATGCCTACTCTCAATTCATTCTAGCGGCGGTGCAGGCTGTAAAA
TTTCAACAAGAAGAAGACACGGACACAAACACTTCGACTCAAAAACGTTC
CAGCGTAGTCTCCACGCGCTTGAAAGAATGCATACGCCGAATAGACATGG
CCTTGCTCATGGGCCCGCCCAGCATTAAGGGGGTAGCCAACGGCTTGATC
GAATGGGCAGAGCAACGCCTTCGCCCGTGCAAGCCAGAGGCGGCCCAATT
CTTGTCGTCGCGACCCAGGGAGCTCCGAGTGAAGCGGCCGCGTCCCGTGG
AGGGTTTAGTTGGAGACATTCCGCGCCTGGCGTGCCCCAGCCTCGACGCT
TTTCTGGAGAAGCACATGGTACCGCAGGTGCCTGTTATTCTTACACAGTG
CATGGAGCACTGGCCGGCGTTGAGGCGTTGGAGAGACATGGACTATTTGA
AAGAGGTTGCGGGGGAGCGGGTGGTTCCGGTGGAGGTGGGTTCAGGCACC
TACATGGCGGGTGAGGGGGAGGGATTGGAGGAAGAGGGGGCTTGGGGGCA
AGAACTCATGCCTTTGGGAGACTTCATCGATCGCTATATGACAGGGGCCG
AGAGTGGCCCGGAGTCAAGGGAGGGTGACGCCAGCAGCGCCGGCCCAGGG
GGCCAGACGTGGGCAGACGGAGGGGAAGTGGAGGCCGGACGGCGTGAGAC
CGGTTGCAGGGCGTACTTGGCGCAGCACGAGCTCTTTGAACAGATCCCAG
CTTTGCAGAAAGACGTGTGGGTCCCCGACTACTGCGCCCTGGAGGTGGAG
GGAGGGGAGGAGGCCCTGGAGGAGGACGGACTTGTGGTCACCAATGCCTG
GTTCGGCCCCGGGGGCACTGTCTCGCCCACGCATACGGACCCCTACCACA
ACCTGCTTGCCCAGGTGGTTGGCTCCAAGGCGGTCAGGCTTTTCGCCCCC
TCCGAGTCCCCCTGCCTCTACCCCTGCCAGGGCCTCCTCCGCAACAACAG
CCGCGTCGATCCCCTGCGCCCCGACCTGGCCCGCTTCCCCCTCTTCGCGC
GGGCTAATAGCCAGACTTGCGTGCTGGAGGAGGGGGAAATGCTCTACATC
CCGCCCCTCTGGTGGCATCACATCCAGGCCCTGAGCCCGTCCTTCTCTGT
CTCCTTCTGGTGGGGCCGACGCAGGGAGGGCGCCGACCCCGCGCCGGGTT
GAGGGATGCACGGGCTGTGCTCGGGTGATTCGCTTAGAAACTACGGGCGG
AAAAGAACATTTGCTTGCAGAAAGCAAGGTTCTGCCAGGGGGGGGGCTCT
GTTTCAGTGGCCTTTTTCTTTCCTGCGAGCCAGCGAGGGGTGGGGGTAAA
GTTAACTTCCCTCGCCTCTACCTCGAGCAAGGCGCTACCAAACCGACATC
CGCCCGCTAATCGACTGCATTGATAGGGATAGGTCATTTAGCTCGGAAGG
CGTGACCGTCTCCATGTCTGTCGCTGGCGGCGCCAGGTCCTCGAGCTGCC
AGTACCGGCCTCCCACGGCGAGCAGGGAGGCCTCGGGGGGGGGCGTAAGA
GCCTCCATGCTCGGGAAGGGGCGGAAGGAGACGCGTGTTTGCTCGACAGC
ATCGTAAATTGTGATGACGATGCTGTAGCCATGGGCGACAGCGGCCATCT
CTAGGGATTCCACGGTGGGGCCTCTGCCGCTGAGAGGCGGGCCTGCGTTC
TGCCCCGCCGCGATAGCGCCCGCATGGACCCCCGCATGAAGCCCTAGGCC
TCCGGGCGGTGCTTGATACAGCAGTCCTCCATGTGTCGAGATGCATCGAT
CCATTGTGGCACGCACCTGCGCACTGAGGCTCGGTGTGCCGTACACTGCC
AGGCTGATTTCTTCCAAGAAGCACCGACCAGGGCTATCGGGGAATCTGAG
CGTGAGACCAAACCGCTGTTGGAGCAGCCAGGCGCATTCTTGCAGGCATG
TCAGGGAGAGATTCGGTCGGCAAAGGCTCGGAGAGGCCGCTTGCCACGGG
CTCGCACAGGGGCTTGAAAGTGTGGAGGGAATCGACGGCGGAGCTTTGTC
CAGGAAGGAGGGCCACTGGGCAAGGCTCTGCATGCTTTCAGACGGAGAGC
TGGGTGGCATGCTTGGACATTGAAAGTTCGGGAACGCTTTCCCCCAAGGA
GACACTTGCAGGGGGATCTGCGGTATGGGTGCTGTATTGTTCAAGAGCTC
TGATTGAGAGGGGAGAATGGAAGGCAAATTATTCCCCACCAAAGCCAGTT
CTGTCCCAACACTTCCTGCGAAGTGGATGGCTTGGTCATTAGAAAGATGC
TGTGGAGCGGAGAAAGTATCTCCGACCATCATTTCGACGTGTCTGACATC
AGCCTGCGGATTCCGGTATCCTGAAGTCGATTTGCTGAGGAAATTTGGTT
GTATCCCGCTCGAACGGTCTTGACGCAGCAAAGCAGAAATGGCTAAAATT
GCTTGATTATTGGCCACTTGAGAGGGAGCCACTACTCGTATACTCAAATT
GCGTACAGAAATGAATTCGATGGAGTCTACGCCACACTGGATAGCCACGT
CGTGGATGACATGGCGTTGGGACACTTGGGCATAAAAACTGTAGTTCTTT
TTGAGAAATTCTATCTCGTCGGAGTTTGAAGAAATATTGCTTATGAAAGG
CAGGCGAATGTAGCTGTGCGAATGTCGTGACATGCTGCACAGAAAATTTG
CGGGTCGGGGAGGACCTGAGGGCTACAGCTAGGGAGATAGATCTAGGAGG
ATTGATCCCTGACAGGATGAAGAATAAACGGGAGAGAAAGAATATGGGAA
ATGATTAAATAAAGACGCTCTACGACATTCCATCCAAGGTTTTCCCGCAA
GGAGCCAGCA back to topCoding sequence (CDS) from alignment at CM002471.1:452333..455992- >rna7379 ID=rna7379|Name=rna7379|organism=Nannochloropsis gaditana|type=CDS|length=2886bp|location=Sequence derived from alignment at CM002471.1:452333..455992- (Nannochloropsis gaditana)
ACCTTCGGCAAGAAGGGTCTCTTTTATGCGGTTCATTGTGCGCCGGCTGT
ACAAATTCAATCCAAGCCGGTGATTGGACGACTGTCGAAGCTCTGGGCCG
GGAGCTTGAGGAGGTGGCGTGGGAGGGTTTACACAGCAGCCCCGCATGGC
GCGATGTCACAGTAACCACCAGAAGAGTGTATGCCTACTCTCAATTCATT
CTAGCGGCGGTGCAGGCTGTAAAATTTCAACAAGAAGAAGACACGGACAC
AAACACTTCGACTCAAAAACGTTCCAGCGTAGTCTCCACGCGCTTGAAAG
AATGCATACGCCGAATAGACATGGCCTTGCTCATGGGCCCGCCCAGCATT
AAGGGGGTAGCCAACGGCTTGATCGAATGGGCAGAGCAACGCCTTCGCCC
GTGCAAGCCAGAGGCGGCCCAATTCTTGTCGTCGCGACCCAGGGAGCTCC
GAGTGAAGCGGCCGCGTCCCGTGGAGGGTTTAGTTGGAGACATTCCGCGC
CTGGCGTGCCCCAGCCTCGACGCTTTTCTGGAGAAGCACATGGTACCGCA
GGTGCCTGTTATTCTTACACAGTGCATGGAGCACTGGCCGGCGTTGAGGC
GTTGGAGAGACATGGACTATTTGAAAGAGGTTGCGGGGGAGCGGGTGGTT
CCGGTGGAGGTGGGTTCAGGCACCTACATGGCGGGTGAGGGGGAGGGATT
GGAGGAAGAGGGGGCTTGGGGGCAAGAACTCATGCCTTTGGGAGACTTCA
TCGATCGCTATATGACAGGGGCCGAGAGTGGCCCGGAGTCAAGGGAGGGT
GACGCCAGCAGCGCCGGCCCAGGGGGCCAGACGTGGGCAGACGGAGGGGA
AGTGGAGGCCGGACGGCGTGAGACCGGTTGCAGGGCGTACTTGGCGCAGC
ACGAGCTCTTTGAACAGATCCCAGCTTTGCAGAAAGACGTGTGGGTCCCC
GACTACTGCGCCCTGGAGGTGGAGGGAGGGGAGGAGGCCCTGGAGGAGGA
CGGACTTGTGGTCACCAATGCCTGGTTCGGCCCCGGGGGCACTGTCTCGC
CCACGCATACGGACCCCTACCACAACCTGCTTGCCCAGGTGGTTGGCTCC
AAGGCGGTCAGGCTTTTCGCCCCCTCCGAGTCCCCCTGCCTCTACCCCTG
CCAGGGCCTCCTCCGCAACAACAGCCGCGTCGATCCCCTGCGCCCCGACC
TGGCCCGCTTCCCCCTCTTCGCGCGGGCTAATAGCCAGACTTGCGTGCTG
GAGGAGGGGGAAATGCTCTACATCCCGCCCCTCTGGTGGCATCACATCCA
GGCCCTGAGCCCGTCCTTCTCTGTCTCCTTCTGGTGGGGCCGACGCAGGG
AGGGCGCCGACCCCGCGCCGGGTTGAATGGAATGCCTTGCTGATTTTCCA
GCTTGGAGGATTGCACTTGAGGAGCCTCATGAGCTTTGTCAAGACCTTCG
GCAAGAAGGGTCTCTTTTATGCGGTTCATTGTGCGCCGGCTGTACAAATT
CAATCCAAGCCGGTGATTGGACGACTGTCGAAGCTCTGGGCCGGGAGCTT
GAGGAGGTGGCGTGGGAGGGTTTACACAGCAGCCCCGCATGGCGCGATGT
CACAGTAACCACCAGAAGAGTGTATGCCTACTCTCAATTCATTCTAGCGG
CGGTGCAGGCTGTAAAATTTCAACAAGAAGAAGACACGGACACAAACACT
TCGACTCAAAAACGTTCCAGCGTAGTCTCCACGCGCTTGAAAGAATGCAT
ACGCCGAATAGACATGGCCTTGCTCATGGGCCCGCCCAGCATTAAGGGGG
TAGCCAACGGCTTGATCGAATGGGCAGAGCAACGCCTTCGCCCGTGCAAG
CCAGAGGCGGCCCAATTCTTGTCGTCGCGACCCAGGGAGCTCCGAGTGAA
GCGGCCGCGTCCCGTGGAGGGTTTAGTTGGAGACATTCCGCGCCTGGCGT
GCCCCAGCCTCGACGCTTTTCTGGAGAAGCACATGGTACCGCAGGTGCCT
GTTATTCTTACACAGTGCATGGAGCACTGGCCGGCGTTGAGGCGTTGGAG
AGACATGGACTATTTGAAAGAGGTTGCGGGGGAGCGGGTGGTTCCGGTGG
AGGTGGGTTCAGGCACCTACATGGCGGGTGAGGGGGAGGGATTGGAGGAA
GAGGGGGCTTGGGGGCAAGAACTCATGCCTTTGGGAGACTTCATCGATCG
CTATATGACAGGGGCCGAGAGTGGCCCGGAGTCAAGGGAGGGTGACGCCA
GCAGCGCCGGCCCAGGGGGCCAGACGTGGGCAGACGGAGGGGAAGTGGAG
GCCGGACGGCGTGAGACCGGTTGCAGGGCGTACTTGGCGCAGCACGAGCT
CTTTGAACAGATCCCAGCTTTGCAGAAAGACGTGTGGGTCCCCGACTACT
GCGCCCTGGAGGTGGAGGGAGGGGAGGAGGCCCTGGAGGAGGACGGACTT
GTGGTCACCAATGCCTGGTTCGGCCCCGGGGGCACTGTCTCGCCCACGCA
TACGGACCCCTACCACAACCTGCTTGCCCAGGTGGTTGGCTCCAAGGCGG
TCAGGCTTTTCGCCCCCTCCGAGTCCCCCTGCCTCTACCCCTGCCAGGGC
CTCCTCCGCAACAACAGCCGCGTCGATCCCCTGCGCCCCGACCTGGCCCG
CTTCCCCCTCTTCGCGCGGGCTAATAGCCAGACTTGCGTGCTGGAGGAGG
GGGAAATGCTCTACATCCCGCCCCTCTGGTGGCATCACATCCAGGCCCTG
AGCCCGTCCTTCTCTGTCTCCTTCTGGTGGGGCCGACGCAGGGAGGGCGC
CGACCCCGCGCCGGGTTGAATGGAATGCCTTGCTGATTTTCCAGCTTGGA
GGATTGCACTTGAGGAGCCTCATGAGCTTTGTCAAG back to top
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