EWM23320.1, cds7352 (CDS) Nannochloropsis gaditana

Overview
NameEWM23320.1
Unique Namecds7352
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:434764..434872 -
Alignment locationCM002471.1:434250..434342 -
Alignment locationCM002471.1:433216..434018 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23320.1
ProductKinase phosphorylation domain protein
Orig transcript idgnl|cribi|Naga_100053g24.5060.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:434764..434872 -
CM002471.1supercontigCM002471.1:434250..434342 -
CM002471.1supercontigCM002471.1:433216..434018 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR019315Kinase_phosphorylation_domain
Homology
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|585104327|gb|EWM23320.1| (Kinase phosphorylation domain protein [Nannochloropsis gaditana])

HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query:    1 MFVKTNARTHMLIVLFLVHHPPRERLSKRRYTAGEGGFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 334
            MFVKTNARTHMLIVLFLVHHPPRERLSKRRYTAGEGGFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH
Sbjct:    1 MFVKTNARTHMLIVLFLVHHPPRERLSKRRYTAGEGGFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 334          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|585104329|gb|EWM23322.1| (Kinase phosphorylation domain protein [Nannochloropsis gaditana])

HSP 1 Score: 598.971 bits (1543), Expect = 0.000e+0
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query:   37 GFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 334
            GFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH
Sbjct:   32 GFSMSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 329          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|585104328|gb|EWM23321.1| (Kinase phosphorylation domain protein [Nannochloropsis gaditana])

HSP 1 Score: 479.559 bits (1233), Expect = 2.041e-169
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query:   93 MWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 334
            MWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH
Sbjct:    1 MWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPAPRHEHLPKGLSMVEREIERMKSAQAQGVAFKYEDDATHLYAEQEAEGGGHTHAGNKRKDSSKRESLKDYGGSTREEKKLKKEEKRRKKEEKRERKQDKKRQRKEKILAVAEEAMPSRHTSRPARNGRSRSPDQKHRRQDGGRSCSPAHGSRGRRVH 242          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|695383898|ref|XP_009517846.1| (hypothetical protein PHYSODRAFT_263951 [Phytophthora sojae] >gi|348690757|gb|EGZ30571.1| hypothetical protein PHYSODRAFT_263951 [Phytophthora sojae])

HSP 1 Score: 157.918 bits (398), Expect = 3.586e-44
Identity = 82/139 (58.99%), Postives = 102/139 (73.38%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAPA 178
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY K  K +  EA       Q E+A  +QRDE+++N ALG+APK +      L ASE+K+LL +G +ERD +  ERVEG+GAAP 
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKTNKSQRAEA------LQAELALAKQRDEDLMNEALGIAPKRRHEPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPV 132          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|566011436|gb|ETI34347.1| (hypothetical protein F443_19136 [Phytophthora parasitica P1569])

HSP 1 Score: 161.384 bits (407), Expect = 2.388e-43
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K++  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKLQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|570315177|gb|ETO63125.1| (hypothetical protein F444_19092 [Phytophthora parasitica P1976])

HSP 1 Score: 160.999 bits (406), Expect = 2.627e-43
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K++  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKLQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|567948956|gb|ETK74692.1| (hypothetical protein L915_18559 [Phytophthora parasitica])

HSP 1 Score: 160.999 bits (406), Expect = 2.712e-43
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K++  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKLQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|675176245|ref|XP_008897007.1| (hypothetical protein PPTG_05247 [Phytophthora parasitica INRA-310] >gi|568102774|gb|ETN17445.1| hypothetical protein PPTG_05247 [Phytophthora parasitica INRA-310] >gi|570969245|gb|ETP32364.1| hypothetical protein F442_18912 [Phytophthora parasitica P10297] >gi|970639299|gb|KUF82418.1| uncharacterized protein AM587_10004979 [Phytophthora nicotianae])

HSP 1 Score: 160.229 bits (404), Expect = 5.403e-43
Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K +  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|568007104|gb|ETL81349.1| (hypothetical protein L917_18288 [Phytophthora parasitica])

HSP 1 Score: 160.229 bits (404), Expect = 5.403e-43
Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K +  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
BLAST of EWM23320.1 vs. NCBI_GenBank
Match: gi|567977614|gb|ETL28112.1| (hypothetical protein L916_18460 [Phytophthora parasitica] >gi|570938995|gb|ETP04252.1| hypothetical protein F441_18948 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 159.844 bits (403), Expect = 7.348e-43
Identity = 90/166 (54.22%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   40 MSFGPKTGYRDGGTRGGQDRFKWEDVKDEHYREHYLGHSLKAPVGRWQKGKDLMWYTKAGKVKSGEAEDPEAQRQREVAEIRQRDEEMINAALGMAPKYQAVVESRLEASELKQLLGKGLSERDDLHGERVEGVGAAP--APRHEHLPKGLSMVEREIERMKSAQA 203
            MSFG KT YR GGTRGG D+FKWEDVK++ YRE+YLGHS++APVGRWQKGKDL WY KA K +  EA       Q E+A  +QRDE+++N ALG+AP+ +      L ASE+K+LL +G +ERD +  ERVEG+GAAP  A   E  PK  ++ ER  +++ S +A
Sbjct:    1 MSFG-KTNYRVGGTRGGADQFKWEDVKNDKYRENYLGHSVQAPVGRWQKGKDLTWYAKANKSQRAEA------LQAELALAKQRDEDLMNEALGIAPRKRREPAEGLSASEMKELLKRGEAERDGMDVERVEGLGAAPVEAEGFETGPK-RTLAERYKDQLVSGKA 158          
The following BLAST results are available for this feature:
BLAST of EWM23320.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104327|gb|EWM23320.1|0.000e+0100.00Kinase phosphorylation domain protein [Nannochloro... [more]
gi|585104329|gb|EWM23322.1|0.000e+0100.00Kinase phosphorylation domain protein [Nannochloro... [more]
gi|585104328|gb|EWM23321.1|2.041e-169100.00Kinase phosphorylation domain protein [Nannochloro... [more]
gi|695383898|ref|XP_009517846.1|3.586e-4458.99hypothetical protein PHYSODRAFT_263951 [Phytophtho... [more]
gi|566011436|gb|ETI34347.1|2.388e-4354.22hypothetical protein F443_19136 [Phytophthora para... [more]
gi|570315177|gb|ETO63125.1|2.627e-4354.22hypothetical protein F444_19092 [Phytophthora para... [more]
gi|567948956|gb|ETK74692.1|2.712e-4354.22hypothetical protein L915_18559 [Phytophthora para... [more]
gi|675176245|ref|XP_008897007.1|5.403e-4354.22hypothetical protein PPTG_05247 [Phytophthora para... [more]
gi|568007104|gb|ETL81349.1|5.403e-4354.22hypothetical protein L917_18288 [Phytophthora para... [more]
gi|567977614|gb|ETL28112.1|7.348e-4354.22hypothetical protein L916_18460 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7369rna7369Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications