EWM23364.1, cds7315 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|585104372|gb|EWM23364.1| (hypothetical protein Naga_100057g18 [Nannochloropsis gaditana]) HSP 1 Score: 472.241 bits (1214), Expect = 1.607e-168 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 Query: 1 MSAHVPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV 230 MSAHVPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV Sbjct: 1 MSAHVPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV 230
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|553183091|ref|XP_005853837.1| (zn-binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|553185602|ref|XP_005854274.1| zn-binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294786|gb|EKU22086.1| zn-binding protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295223|gb|EKU22522.1| zn-binding protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 471.855 bits (1213), Expect = 3.474e-168 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 Query: 1 MSAHVPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV 230 MSAH PHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV Sbjct: 8 MSAHAPHGPPRQRNTLLLQSIAVLILARTLYAFVSPTVPSRRSVESLVAHRVVPVLLARVGGGFGFGKKKTLASEVDDLKYFEGTIYSPYPGRRPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHVWMSERSKFLRGEDGGWLFLDEQV 237
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|159465870|ref|XP_001691143.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158270335|gb|EDO96194.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 98.2117 bits (243), Expect = 2.981e-22 Identity = 51/105 (48.57%), Postives = 64/105 (60.95%), Query Frame = 0 Query: 103 PCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEAFITFRVKRHV 207 PC CGS +Y CC PLH G RA+TPE LLRSRY+AYV P Y+ TTHP S P AY+ ++ + L I Q+AGAT +EAFITFR++R + Sbjct: 42 PCPCGSGTAYEACCAPLHDGATRAATPEVLLRSRYTAYVAKNPEYIAETTHPDS-PEYSGSRTAYIRDVKNTMRRLDPMGLAIVSQDAGATPDEAFITFRLQRRI 145
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|1039820971|ref|WP_064980086.1| (hypothetical protein [Mycobacterium mucogenicum] >gi|1038389389|gb|OBJ43759.1| hypothetical protein A5630_18175 [Mycobacterium mucogenicum]) HSP 1 Score: 96.6709 bits (239), Expect = 5.650e-22 Identity = 56/137 (40.88%), Postives = 79/137 (57.66%), Query Frame = 0 Query: 98 PFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEA-FITFRVK------RHVWMSERSKFLRGEDGGWLFLD 227 P + PC C + Y CC PLH+GE A+T AL+RSR++A+ G YLLAT HP + P A L+L + ++LQI EAG T++ A + FR + RH+ + ERS+F RG+DGGWL++D Sbjct: 2 PTNNPPCRCDTGAEYAACCGPLHRGERSAATAVALMRSRFTAFALGEVGYLLATWHPDTRP-------ADLDLDDAVA----WRRLQIVDTEAGGTDDPAGVVQFRAQYVRDGSRHI-LHERSRFTRGDDGGWLYVD 126
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|950080920|ref|WP_057166712.1| (hypothetical protein [Mycobacterium sp. Root265] >gi|946265601|gb|KRD17011.1| hypothetical protein ASE48_26370 [Mycobacterium sp. Root265]) HSP 1 Score: 95.1301 bits (235), Expect = 2.734e-21 Identity = 53/138 (38.41%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 100 ESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEE-AFITFRV------KRHVWMSERSKFLRGEDGGWLFLDEQV 230 ++ PC CGS ++Y CC PLH G A T EAL+RSR+SA+ G YLL++ HP + P R L+L + + ++LQI EAG +++ + FR KRH+ + ERS+F RG DG W ++D ++ Sbjct: 5 DTGPCPCGSGQAYRDCCGPLHDGTVVAGTAEALMRSRFSAFARGRADYLLSSWHPGTRPAR-------LDLDD----QITWRRLQIVDTEAGGADDDTGIVEFRAEYLQDGKRHI-LHERSRFRRGRDGSWRYVDGEI 130
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|1119079807|emb|SHW26150.1| (seC-C motif domain-containing protein [Mycobacterium abscessus subsp. abscessus]) HSP 1 Score: 94.3597 bits (233), Expect = 6.024e-21 Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 97 PPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEA-FITFRVK------RHVWMSERSKFLRGEDGGWLFLD 227 PP + PC C + Y CC PLH+GE A+T AL+RSR++A+ G YLLAT HP S P A L+L + ++LQI EAG ++ A + FR + RH+ + ERS+F RG DG WL++D Sbjct: 6 PPTNNQPCRCDTGAEYDACCGPLHRGERAAATAVALMRSRFTAFALGDVDYLLATWHPGSRP-------ADLDLDDAVV----WRRLQIVDTEAGGADDPAGVVQFRAQYVRDGSRHI-LHERSRFTRGGDGRWLYVD 131
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|750490599|ref|WP_040772470.1| (hypothetical protein [Rhodococcus rhodnii]) HSP 1 Score: 94.3597 bits (233), Expect = 6.054e-21 Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 94 RPLPPFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGAT-EEEAFITFRVKRHVW-----MSERSKFLRGEDGGWLFLD 227 RP P + PC CG SYG CC PLH+GE RA + EAL+RSRY+A+ G +L+ + HPS+AP E +++ EE +L+I G + E +TFR H ++E S+F+R EDG WL+LD Sbjct: 6 RPAPEPDRAPCPCGRGDSYGDCCGPLHRGERRAPSAEALMRSRYTAFAIGDAGHLVRSWHPSTAP----------EHVDLD-PEEQWDRLEIVATTGGGPFDSEGTVTFRAHHHRGGRAGVLAEHSRFVR-EDGRWLYLD 133
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|518947090|ref|WP_020102965.1| (hypothetical protein [Mycobacterium sp. 360MFTsu5.1]) HSP 1 Score: 92.4337 bits (228), Expect = 2.660e-20 Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 0 Query: 98 PFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEE-EAFITFRVK------RHVWMSERSKFLRGEDGGWLFLD 227 P + PC C + Y CC PLH+GE A+T AL+RSR++A+ G YLLAT HP + P A L+L ++LQI EAG ++ + FR + RH+ + ERS+F RG+DGGWL++D Sbjct: 2 PTNNPPCRCDTGAEYAACCGPLHRGERSAATAVALMRSRFTAFALGEVGYLLATWHPDTRP-------ADLDLDGAVV----WRRLQIVDTEAGGADDPTGVVQFRAQYVRDGSRHI-LHERSRFTRGDDGGWLYVD 126
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|992019995|ref|WP_060999096.1| (hypothetical protein [Mycobacterium mucogenicum]) HSP 1 Score: 91.6633 bits (226), Expect = 5.727e-20 Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 0 Query: 98 PFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEA-FITFRVK------RHVWMSERSKFLRGEDGGWLFLD 227 P + PC C + Y CC PLH+GE A+T AL+RSR++A+ G YLLAT HP++ P A L+L + ++LQI EAG +E A + FR + RH+ + ERS+F RG DG WL++D Sbjct: 2 PTNNQPCRCDTGTEYDACCGPLHRGERPAATAVALMRSRFTAFALGDVDYLLATWHPNTRP-------ADLDLDDAVV----WRRLQIVDTEAGGADEPAGVVQFRAQYVRDGSRHI-LHERSRFTRGGDGRWLYVD 126
BLAST of EWM23364.1 vs. NCBI_GenBank
Match: gi|1039529425|ref|WP_064860834.1| (hypothetical protein [Mycobacterium mucogenicum] >gi|1037480811|gb|OBA77647.1| hypothetical protein A5642_05775 [Mycobacterium mucogenicum]) HSP 1 Score: 91.2781 bits (225), Expect = 6.236e-20 Identity = 54/137 (39.42%), Postives = 77/137 (56.20%), Query Frame = 0 Query: 98 PFESTPCACGSDKSYGQCCFPLHKGEDRASTPEALLRSRYSAYVHGFPRYLLATTHPSSAPMRPKRLKAYLELLEIACSEENLKQLQIGVQEAGATEEEA-FITFRVK------RHVWMSERSKFLRGEDGGWLFLD 227 P + PC C + Y CC PLH+GE A+T AL+RSR++A+ G YLLAT HP++ P A L+L + ++LQI EAG ++ A + FR + RH+ + ERS+F RG DG WL++D Sbjct: 2 PTNNQPCRCDTGTEYDACCGPLHRGERPAATAVALMRSRFTAFALGDVDYLLATWHPNTRP-------ADLDLDDAVV----WRRLQIVDTEAGGADDPAGVVQFRAQYVRDGSRHI-LHERSRFTRGRDGRWLYVD 126 The following BLAST results are available for this feature:
BLAST of EWM23364.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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