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Properties
Property Name | Value |
Product | dna-directed rna polymerases and iii subunit rpabc2 |
Orig transcript id | gnl|cribi|Naga_100057g24.3917.mrna |
Orig protein id | gnl|cribi|Naga_100057g24.3917 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002471.1 | supercontig | CM002471.1:336800..337637 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7326 ID=rna7326|Name=rna7326|organism=Nannochloropsis gaditana|type=mRNA|length=3351bp ATGCAAAGGACGAGGCAAATGCATTCCCCCCGTTTGTTACTGTGGGTGCT CTTGCTAGCGGCGGTAGGCTCCGGTGCGGTCGGCTGGGGCCGCCTGGCCT TCGCTCCATCACTAGCATCTCGGCCGTCGTCGTGGCACTCGCGCTGGCAC AAACGGCGGCTCGGTCCTGTTTTCTGGGACAGTGGAGCCAGTATCAGCCC GAAAAGCAGGACCTGTATGTCGATTGCCCCGCATGGTCCTCGCGAGGCGT CTCGTCCAGGAGTAGGGTCCCCGGGGGGACGAAGCCCCTTGGATTTTGGC CCCCCCTTCCAGAAAGATGGAAACTTCCTCCGAGAGCATTCCCCGCGGCT ACAGCAAGATACTAGGCAGGTTGCGGACAGTGCGACTCACCGACGCGAGC CACGAGAAGAGGAGTCGCCATCCGCGCGGGCACCTCCCTCCTCAGTCTCA CCCCCTCCCCCTCAGACCGCCGCCGCCAGCCAGCGGAAACCCTTCTCCCT CAGCAAAGCCGTCCTCATGGGCCCCTTTGCCTTCGAGGCGTACACCGATC CCCCCCGTACTTCCGGGTATTGGCAGTCGGGCCGCGACAAGAACGAAGTG GCCATCCTGCACGAGGGCTTCCTCCGAGAAGCGTACGCCGGGAAGCTGCG TGTCCGGGTGAAGGCCGTGACCGAGACGAGGGCCGAGGCGCAGGCGGTCT TTCTTAAGGCGGCGGGCGCTCGGACGGAGGGACAGGGACCGAGTGGGAAG GAAGGAGCGAGAGCGGGCGGCAGTGTTGGAAATCCGAGGGCCGAGATGCT TGCGGTGTCGGTGGCGATGGAGATGGGGGAGGAGTTTGTGGGCTCTCAGA TGGTGAGGCTGGAGCGCGTGGAGAGGGAGGAAGGAGGGGAGAGCAATGTG TACGTACCTGTCCGGGGGGCCCTAGCCGGGAGGGAGACAGGGCTGGGAGG AAGCGTGGGCGTGGCGGGGCTTGAGGACGCGGGCTTGGAGGCCTGGGTGC CGGCGCCGCGGGCCCAGATGCAGGAGGGCGGGGAGACGCTGCTGCGGTTT TCCTTGAGAGGCAAGGAGGAATGTTCGTTGGGCGTCGCTGAAGTCGACGT GGCGGACTTGTTGGGGGGCTGTGGGAGGGAGGAAGGGGCCCGGTCCTGGG AGCGAGACCTGCTCTTGACGGCGCCCGCGGGCAGGGGACACGGGGTGGAG GGCGATGACCGAGGGGAGGACGCACGGCGGCGGCTGGCAGAGGCGGCTTC GGGGGTGCGGGTAAGGGTTGAGATGGTGTTCACTCCCTTGGCAAGGCCGT CGGTCTCGGCACCGTCCGCGTTGGAGGCCCCCGCCTGTGCAGAGATGGGG GCAGGCGCCGACTCCGGCCTCGGGGTCTCTCAGGACGCGCGGGACGGAGG AAGCGAGGAGGCGGGGGCCGGGGGAGGGGAGACGGAAAAGCGCGGGCGTG AGAGGGAGAAGGGGAAAGGGAGGGAGTGGGTGGGCGCCCGAGGGTGTTCC CGGGACTGGAGGGAGCTGGCGGAGGCCTTGGGAGGGGAGGCGGTGAGGGC CGCGGACTTGGAGCTTCTGTGCTTCTTGGAGAACCGGGTCACGGACACCC AGTTGAAAGTGTGGCGGGACCGGGCGGGGACGGGGGGAAGGAAACGCTTG CTGGTGGCCTTCCGTGGGACGGAGTTCTGGAAGGTGAGGGACCTGATCAC AGACATGAAGCTGTTGCAGGACCCCTGGGCGGTGCACGAGCTTGACAAGA GGGAGGGCGGGAAGGAGGGCAGGAAGACGGAGGTGTCGCCTTTCCTGGCA ACGGCTCAGGCCTCGCCGCAGGAATCGCGGGAGCAGGAGGGATCGCGGGA GGCGCGGTGGTCGGAGGAGGGGCCGCAGGCAGAGACCGGAGAAGGGAGAA GCGGCACCGGGACGGCCGCCTCCCGCTCCCCCACACCGGGTCTGGACTTC TACGCGGCCTTGGCGACCCAGGCGAACCGGACGTACATGCTCTACAACGA CATGGACCGGGCGGTGAAGGAGACGTTCGGCTATGTGTGGAGGAACACCC CCTTCTTCGGGGCCCTTCCTCTCTCCGCCCCTGCCTCCCCTCCCCCCTCC TTCCCTTTTTCCTCCCATGCTGCCCCGCAGCCCTTCTCCGGGTCGTCTTC GACCAATACCTCTCCCCGTTCCGACCTCCCTCTCCACGCGCCCGGATGCC CCTCCCCCCCTTCTCCCGCCCCCCTTCTCACGGCACCCGCCAAGAGCAAC GAGGAGGCGATCACGAGCGTCCTCATGGCTGTCCTCGACCGAGTGATGGG CAACAATCCTCTCGCCTCCTCCCCCTCCCTCCCGTCCTCGCCCCCCTCCT CCTTCTTCGTCCAGCCCCTGTCAGGACAGGTGAGGAGCCCTTCCGACTTC CGGGCAGCCTTCTACGGCCTGGCCTCGGACCTGGGGCGGCAGCTCTTTCC CGCCTCTCCCTCGGCCTCACCCTCCCCGGCTGCGGGCGACGAGACGGACG ACAAGAGGGAAAAGTCCCAGAAGAGTCCCTGCGATCCGGACGGGCGGGGG AGGGGAGGGAATGGAGGAGTCGAGACGGGGGACCAGGCGGTCCTGGGCGT AGTGGGGGAAGAGGTCAAGAGTCCGCTTCTCATGCTCCCGTCCCGCTTCA AGGGCGTCTTCGCCACGCTCGTGGACGAAACCTTCCAGCTCATGGACAGC CGCAGCTTCTTCCCCTCCTCCCCCCCCACGCTCCTGGCCCCCCGCCCTCC CTCCCCCGCCGACCCCTCCGTCTTCCCAGAGGCAGACTTCCGTGCCTCTC TCCTGCAGGGTCTGGACCAGGTCGTCAGCGGCCTGCAGAAGAAGCAGATC GAGCAGTTGGCCGCCCCCACAACGCGCGCCCGCACCCTGTCTTCCCCCCC TTCCTCACCTGCCCCCCCCCTTCCTTTCCCCCCCGCCTGGACGCCGCCTC CTTCGGCGCCAGCGCCGAGGCTCGGGTCCACGCAGGCTTCAAAGAAGCCT ATCTCTCTGTCCGTCCGCGCCTGCTGGCCCTCCTGGATGCGGCGACCCTG GGGGCCTTGGAAGGAGGGCGGGCGGAGGATTGGGAGATCCTCCTCACGGG CCATTCTCTGGGCGGGGCTTTGGCCTCCCTGTGTGCCCACGACTTGTCCT CACGGTACGCAGGGCTCTCCCTGTCCATGTACAATTTTGGCACGCCCCGC ATCGGGAACTCGGCCTTCGCCCGCGCCTACGAAGAGAGCAACGGCGATAG CTACCGGCTCGTCAACGAGAACGACGCCTTCGCCCGCTTCCCTCGCAACC TGCACCCGACGCTCTTCAACTACAAGCACGCGGGCACGACCGTCCTCTTG A back to topprotein sequence of rna7326 >rna7326-protein ID=rna7326-protein|Name=rna7326|organism=Nannochloropsis gaditana|type=polypeptide|length=142bp MSDNEADALYDNLMDEEEEDLLEEEAAQEEEEEQEGLPDRDEKEPIAILP HDAADSTKANKVKITTRFLTKYERARILGTRALQISMNAPIMVKPGTETD PLKIAMMELRARKIPIIIRRYLPDGSHEDWRIEELEIPGLEM back to topmRNA from alignment at CM002471.1:336800..337637- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna7326 ID=rna7326|Name=rna7326|organism=Nannochloropsis gaditana|type=mRNA|length=838bp|location=Sequence derived from alignment at CM002471.1:336800..337637- (Nannochloropsis gaditana) CTCAAAACGCAACGCCACCACACACCTGCAGGGTCAAAGAACGCTCACGC
ATAAGGAAGACCATGAGTGACAATGAGGCCGATGCACTCTACGACAATTT
GATGGACGAGGAGGAGGAGGATCTATTAGAGGAGGAGGCAGCGCAGGAGG
AGGAAGAGGAGCAAGAGGGGCTTCCTGACCGTGATGAGAAGGAGCCTATT
GCCATCTTACCGCACGACGCTGCAGATTCTACTAAAGCGAACAAGGTCAA
GATTACAACGCGCTTTTTGACCAAATACGAACGTGCTCGGATCTTGGGAA
CACGGGCATTGCAGATCAGTATGAACGCTCCCATCATGGTCAAGCCGGGT
ACCGAGACGGATCCATTGAAGATAGCCATGATGGAGTTGCGTGCCCGCAA
AATTCCGATCATCATCCGCCGGTATTTGCCAGATGGGAGTCATGAAGATT
GGCGCATTGAAGAGCTGGAAATTCCTGGCTTGGAAATGTGAGGAGGAAAT
TTGAAGAGGTGTGAAGGGGCAAAAGCAAAGCGAGAGGGACACGTGCAGAG
ATTGGATTGGAAGGCAAAGGGTCTGCAATTAAACAAGAATGAGGAGTGTC
AACGAGCGCACGACACTCGTGGGACGCGTGTATAAAGGACAAAATACATT
GAGGCATGACCGGTTGTATGACCAAAGAAGAATATATTTTTTAAATTGTG
ACCCTTGCAAAGAGTCACCGGGACAAAAGAAACCACAAGAGAAATACGGT
TTCGAATCGCAAGGCTCCTTTTTTAAACTGAACACAGAAGCTTGCAGAAC
GCGTCGATATAAAGGTAAACACTTGAGATAGGTTTACG back to topCoding sequence (CDS) from alignment at CM002471.1:336800..337637- >rna7326 ID=rna7326|Name=rna7326|organism=Nannochloropsis gaditana|type=CDS|length=429bp|location=Sequence derived from alignment at CM002471.1:336800..337637- (Nannochloropsis gaditana) ATGAGTGACAATGAGGCCGATGCACTCTACGACAATTTGATGGACGAGGA GGAGGAGGATCTATTAGAGGAGGAGGCAGCGCAGGAGGAGGAAGAGGAGC AAGAGGGGCTTCCTGACCGTGATGAGAAGGAGCCTATTGCCATCTTACCG CACGACGCTGCAGATTCTACTAAAGCGAACAAGGTCAAGATTACAACGCG CTTTTTGACCAAATACGAACGTGCTCGGATCTTGGGAACACGGGCATTGC AGATCAGTATGAACGCTCCCATCATGGTCAAGCCGGGTACCGAGACGGAT CCATTGAAGATAGCCATGATGGAGTTGCGTGCCCGCAAAATTCCGATCAT CATCCGCCGGTATTTGCCAGATGGGAGTCATGAAGATTGGCGCATTGAAG AGCTGGAAATTCCTGGCTTGGAAATGTGA back to top
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