EWM23453.1, cds7220 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|585104498|gb|EWM23453.1| (protein of unknown function DUF202 [Nannochloropsis gaditana]) HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 Query: 1 MPPGGGTFGVWLSIFVYRRSQCFVDCPSSTRLAPLATDSSRAFPPPALKMSERTSLLKSSAEPKPVYVVPRTNSISRVTVENVKASPHYGRSQFPSSTGFLERLWPFAYQDTTRYGKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDILGDKEAAAPATPLSMKGGLGSGIKSGPVVTPAPLTGP 266 MPPGGGTFGVWLSIFVYRRSQCFVDCPSSTRLAPLATDSSRAFPPPALKMSERTSLLKSSAEPKPVYVVPRTNSISRVTVENVKASPHYGRSQFPSSTGFLERLWPFAYQDTTRYGKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDILGDKEAAAPATPLSMKGGLGSGIKSGPVVTPAPLTGP Sbjct: 1 MPPGGGTFGVWLSIFVYRRSQCFVDCPSSTRLAPLATDSSRAFPPPALKMSERTSLLKSSAEPKPVYVVPRTNSISRVTVENVKASPHYGRSQFPSSTGFLERLWPFAYQDTTRYGKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDILGDKEAAAPATPLSMKGGLGSGIKSGPVVTPAPLTGP 266
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|585106695|gb|EWM25059.1| (polyphosphate synthetase vtc4 [Nannochloropsis gaditana]) HSP 1 Score: 180.259 bits (456), Expect = 7.467e-53 Identity = 104/201 (51.74%), Postives = 129/201 (64.18%), Query Frame = 0 Query: 51 SERTSLLKSSAEPKPVYVVPRTNSI----------SRVTVENVKASPHYGRSQFPSSTGFLERLWPFAYQ----DTTRYG--------KIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDI 229 E L+S E +P+Y +P + + R + +PH + WPF+ D G K+RKAPVKVEPKVFFANERTFLAWLNMSVTL+SISVAILAFADHNEFSQ+YGF +LPVA+ F +YA+ TY +RS MLRNRMPGPYEDR+GP+VLT+LL L+I +N +LK+IDI Sbjct: 8 QEEKQPLRSGTEIRPIYSIPNSGDLGSGSDAHRNGDRPVITTSAPAPH--------AHSLFGNWWPFSKGRFSGDHDSLGSPSASGARKVRKAPVKVEPKVFFANERTFLAWLNMSVTLSSISVAILAFADHNEFSQVYGFIILPVAICFCVYAMRTYMKRSSMLRNRMPGPYEDRLGPIVLTVLLVLTILINTLLKIIDI 200
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|1210525322|dbj|GAX15840.1| (hypothetical protein FisN_2Lh439 [Fistulifera solaris]) HSP 1 Score: 150.599 bits (379), Expect = 4.113e-41 Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 0 Query: 108 AYQDTTRYGKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNE--FSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDI 229 AY K+RKAP+K+EPKVFFANERTFLAW+++SV LA S+AILA AD +E Q+YG +LPVA+AF++Y++ Y RR+ M+RNR PGPYED VGP VL ++L +SI F LK+ I Sbjct: 105 AYGQIGTLMKLRKAPIKIEPKVFFANERTFLAWMHLSVILAGASIAILAVADDSEGQIGQLYGIVLLPVAIAFIVYSMYQYQRRANMIRNRHPGPYEDTVGPTVLCVMLMISILAQFSLKMYSI 228
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|1210514299|dbj|GAX26629.1| (hypothetical protein FisN_2Hh439 [Fistulifera solaris]) HSP 1 Score: 150.599 bits (379), Expect = 4.293e-41 Identity = 70/124 (56.45%), Postives = 91/124 (73.39%), Query Frame = 0 Query: 108 AYQDTTRYGKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNE--FSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDI 229 AY K+RKAP+K+EPKVFFANERTFLAW+++SV LA S+AILA AD +E Q+YG +LPVA+AF++Y++ Y RR+ M+RNR PGPYED VGP VL ++L +SI F LK+ I Sbjct: 105 AYGQIGTLMKLRKAPIKIEPKVFFANERTFLAWMHLSVILAGASIAILAVADDSEGQIGQLYGIVLLPVAIAFIVYSMYQYQRRANMIRNRHPGPYEDTVGPTVLCVMLMISILAQFSLKMYSI 228
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|1072235234|gb|OEU19963.1| (hypothetical protein FRACYDRAFT_181535 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 144.821 bits (364), Expect = 1.922e-40 Identity = 65/112 (58.04%), Postives = 90/112 (80.36%), Query Frame = 0 Query: 119 RKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEF-SQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDI 229 R AP+K+EPKVFFANERTFLAW+++SV LA SVAILA +D+++ Q+YG +LPVA+AF++Y++ Y +RS+M+RN++PGPY+D VGP VL ++L SIT F +KLI I Sbjct: 5 RAAPIKIEPKVFFANERTFLAWMHISVILAGASVAILALSDYDDIGKQLYGLIMLPVAIAFLVYSMFQYVKRSYMIRNKLPGPYDDTVGPTVLGIMLMASITAQFAIKLIAI 116
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|219126180|ref|XP_002183341.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405097|gb|EEC45041.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 141.739 bits (356), Expect = 2.938e-39 Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 0 Query: 122 PVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFA-DHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDIL 230 PVK+EPKVFFANERTFLAW+++SV LA S+AILAF D+N FSQ+YG +LPVA++F++Y++ Y RR+ M+R+R PGPYED VGPVVL ++L +SI F LKL ++ Sbjct: 1 PVKIEPKVFFANERTFLAWMHLSVVLAGASIAILAFTEDNNPFSQLYGVILLPVAISFIVYSMYQYARRANMIRHRHPGPYEDTVGPVVLGIMLMVSIVAQFSLKLYSMI 110
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|224001320|ref|XP_002290332.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973754|gb|EED92084.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 129.798 bits (325), Expect = 1.571e-34 Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 0 Query: 122 PVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFS--QIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKL 226 PVKVEPKVFFANERTFLAWL++SV LA SVAI+AF+D + Q+YG +LPV++AF++YA+ Y+RR+ M+R + PGPY D GP VLT++L LSI F +KL Sbjct: 2 PVKVEPKVFFANERTFLAWLHVSVILAGASVAIVAFSDARAATPDQLYGIILLPVSIAFILYAMIQYSRRATMIRRKSPGPYVDIAGPTVLTVILMLSIVAQFTIKL 108
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|224011539|ref|XP_002295544.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209583575|gb|ACI64261.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 119.398 bits (298), Expect = 1.186e-30 Identity = 60/111 (54.05%), Postives = 82/111 (73.87%), Query Frame = 0 Query: 122 PVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHN--EFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLIDIL 230 PVKV+PKVFFANERTFLAWL++SV LA SVAI+AF+D + Q+YG +LPV++AF++Y +Y+RR+ M+R + PGPY D GP VLT++L SI F +KL ++ Sbjct: 3 PVKVDPKVFFANERTFLAWLHVSVILAGASVAIVAFSDSHAPNSDQLYGVILLPVSIAFILY---SYSRRASMIRRKAPGPYVDIAGPTVLTVILMCSIVAQFSIKLYTLM 110
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|939401633|emb|CEH12388.1| (vacuolar transporter chaperone 1 [Ceraceosorus bombacis]) HSP 1 Score: 112.079 bits (279), Expect = 1.536e-27 Identity = 55/113 (48.67%), Postives = 80/113 (70.80%), Query Frame = 0 Query: 116 GKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILKLID 228 GK PV+VEPKVFFANERTFL+WLN +VTL++++ +L F D + ++ VA+A ++YAL TY R+ +RNR GPY+DR+GP +L++LL +++ VNFIL+ D Sbjct: 12 GKRIALPVRVEPKVFFANERTFLSWLNFTVTLSALAAGLLNFGD--KVGRVSAAMFSFVAMAIMVYALVTYHWRASAIRNRGTGPYDDRLGPTMLSVLLLIAVVVNFILRFND 122
BLAST of EWM23453.1 vs. NCBI_GenBank
Match: gi|758985736|ref|XP_011391895.1| (putative VTC complex, subunit protein [Ustilago maydis 521] >gi|757944126|gb|KIS66606.1| putative VTC complex, subunit protein [Ustilago maydis 521]) HSP 1 Score: 111.694 bits (278), Expect = 1.630e-27 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 0 Query: 116 GKIRKAPVKVEPKVFFANERTFLAWLNMSVTLASISVAILAFADHNEFSQIYGFTVLPVAVAFVIYALTTYTRRSFMLRNRMPGPYEDRVGPVVLTLLLCLSITVNFILK 225 GK PV+VEPKVFFANERTFL+WLN +VTL++++ +L F D + +I VA+A +IYAL TY R+ +RNR GPY+DR+GP VL+++L +++ VNFIL+ Sbjct: 12 GKRIALPVRVEPKVFFANERTFLSWLNFTVTLSALAAGLLNFGD--KIGRISAAMFSFVAMAIMIYALLTYHWRASAIRNRGSGPYDDRLGPTVLSVMLLIAVLVNFILR 119 The following BLAST results are available for this feature:
BLAST of EWM23453.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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