rna7148, rna7148 (mRNA) Nannochloropsis gaditana

Overview
Namerna7148
Unique Namerna7148
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1421
Alignment locationCM002470.1:561281..562767 -

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Properties
Property NameValue
Productglycine-rich protein
Orig transcript idgnl|cribi|Naga_100339g1.6967.mrna
Orig protein idgnl|cribi|Naga_100339g1.6967
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:561281..562767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100339g1gene6910Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7148rna7148-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23545.1cds7131Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7148 ID=rna7148|Name=rna7148|organism=Nannochloropsis gaditana|type=mRNA|length=1421bp
ACCGCCTTCCTCCCCATCGCGCATGTCAACGTACACCTTATTTCCCCATC
CACAGGAGGGGCACTACACGGATTTTTGGACCCCCCTGCTTGGATACGGG
GTGATTGTCGTCATGGCAACCATGACGTCCTCCTTCACCATGCACCACTG
TAGACATCCTTTTGGGACCTTCCTCCGCCATGTGCTGTTGATAGCCGCCT
CCCTCCCGCTCATCTCCTCCTTCACGCCTCTCAGACCGCCTTCTACCCCG
ACCTTCCTCCCTTCCTCCCCCATACCACATTTTTGCCCTTCTCCACACCC
TCTCCATCTGTCTCCAGCAGCCTCGGGGCCGTCAAGAAGAGAGAGCCGCC
TGTACGGGCTCTTCAACAACAAAGCCACGCCCTCTTCCGAACCTCCTCCC
AAGCCCAGCCTCTTCAACAGATTGTTGGGCACGCCCAGAACCCGCACGGC
CACGGAGAAAGGGAGTGGGCGGAAACGGAAACTGGTGCGTAAGAAGGTTA
AAGCCTCCAGCACCCGAGCGTCCTCCAAGCCCATCAAGCAGGACGCCGCG
GGGGCACGACCAGGGGAGAGGCGGGCGACGCAGCGGTCCACATTGCAGCG
AGATAACTCGTGGGACGTGATTGAGAAGCAGCGGGTCCCTCTTTCTTCCG
TGGCTATTGGCGTGGGCGGAGTGGCCGCAGTGGGAGGGTATTTCTTGAAG
AGGCACTGGGCACAGCGCAACGAGAGGCTGATCACCGACTTTGTCGACGA
CATGGTATCCTCACTCCCACCCTTCCTCCCTTCTTCCCTCCCTCCCTCCC
TCCCGCCCTCCCTCCCTCCCTCCCTCTGTCGTATCGATCGCCTTCCTCTC
CGCCTTTCCTTCCTTGTATCCCTTTTTCTGTTGGGCTTTAAAACGGAAAG
GATTGGGAGGGCGTGGGAGAAGATTGGGCATACCACTTTCTTGTGCAGAT
GGTGGTGGTGGATGAGGGAGGAGGGAAACGAGACTTGACCCGTCCCTGCT
GAGAATCGAAGAGCGCGATCTATGAGATGCTTTATGCTGCCTGTAAAGAA
CGTTGTCCGCATGCCATCCACGTCGAAATGTGTTTGTTCGCTTTCTTTCC
TAAGATTTGTCTGTTTTTGGGGCGGGGGAAAAAAAGGCATAGGCCCTTCA
AACGGCGTCTTCTGTCTCTGGCATTCCGTCTACTTCCCTCGGTCCGGTTG
GCGCCAAGAGTCCATGCGCCACTTCAGGAGAAAATGCAGAGTTAAGGTAT
TTGCCTCAAGAGATAATGCAAAGTTAAGGTATTGAGGAGGTGCAAAGTTA
AGATACCTGCAGGCAACGACACGGCTGAGTAGAGCATAACGCAGAAAACC
ACCGCAAGGAGCGGCCAAAGTCAAGCTTCCCAAGCAGCAGAGACAGGCAG
CAATCTCAAGCGGAAACAAGA
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protein sequence of rna7148

>rna7148-protein ID=rna7148-protein|Name=rna7148|organism=Nannochloropsis gaditana|type=polypeptide|length=122bp
MLSRLALTMRSSLAVTARACSSSSTTPTIHQGTVRAFDSRRGYGFITPED
GSEDVFLHQTQIRRVGFRFVNTGEVVEFQMVQGDKGRRAVNVTAPGGEAL
PPRNNADRPMGSRGGDYSGPRE
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mRNA from alignment at CM002470.1:561281..562767-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7148 ID=rna7148|Name=rna7148|organism=Nannochloropsis gaditana|type=mRNA|length=1487bp|location=Sequence derived from alignment at CM002470.1:561281..562767- (Nannochloropsis gaditana)
CTCATGTTGACCTGTGACACACCCTTGTTATATCCACAGCCTTTCCTTTC
ACTCTTCTGCCCTCTCTGGTCAAGATGCTTTCCCGCCTTGCCCTCACGAT
GCGCTCCAGCCTGGCTGTGACTGCTCGAGCTTGCAGCAGCAGCAGCACCA
CACCCACTATCCATCAAGGCACCGTCCGGGCGTTTGACTCCCGTCGAGTA
AGTGCGACGCGAAGAAAGGGAGGATGACGAGGTTGGGACGTTGCATGAGA
AAGGAGGCATTGATCAATTATGGCCCAGTGGCTTGAGACTAGAATAATCC
TCTTGACGTTCCCTCCTTCCTCCCCCGTTTAACCCTCTCTTCCTCCCTCC
TTCCCTCCTCCCACCATTCTCAACTCGCTGCGCGCAGGGCTATGGCTTCA
TCACGCCGGAGGATGGGTCAGAGGACGTGTTTCTGCACCAGACACAAATT
AGGCGGGTGGGCTTCCGTTTTGTCAATGTGAGAGAGGAGGGCGGGAGGGA
GGGCGGGGAGGAGGGGGGGAGCTTGAGCAGGAGGGAGGAAATGAAGGGGT
ACTGTCAGGATATGACACTCAAGACAGAGGCCGTTTTGTGTCCCTCTCCA
AAAGCTAACAAGCACCTGTGCATCCCTTTTTCTTTTCCCTCCTACAGACA
GGGGAAGTGGTGGAATTTCAAATGGTGCAAGGAGACAAAGGTCGCCGGGC
GGTCAATGTGACGGCCCCGGGGGGGGAGGCGCTTCCTCCCAGGAATAACG
CGGACCGCCCCATGGGCTCGAGGGGGGGAGACTACTCGGGGCCGAGAGAG
TAAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGG
AGGCAGGGAAGGAAGGAGGACTGCGAGGGGAGGGGGTTTAGGGGTTTTGC
GAGAAGGACGAAGGCACAAGAGTGCAAGTGAGGACGGCAAGGTCCTGAGA
AAGCGGAGGCGTAGGGAGGTGGGCTCCAAGTGGAAGGGAGGGAGGAAGGA
AGGGAGAGGGTGAGGAGGAGGGAAGAAAGGAGGGAGGGGGTGAGGGGAAG
AGGGGGGGAAGAGGGCGTTGTTTGTTTTTCGCGCAATATTTACAGCAATC
GACGCTATCTCTCTCGAAGCACGCCCCTCGATTTGTTTCCATCTCTCTGT
GTGGAAGGTGTTGTGAAGCGTGCAAGGAAAACGATCAAAGGGATGCTCCA
GGATCGGGAAAGGCACGAAAGCAGGATGGTAGGGAGAGGAGGTGAGGGAT
CAAGACCAAGAGGAGAGGGGGAAGGAGGCAAGGAGGGAAGGAAGGAGGGA
GGGAGGAGGAGTATTCGACCCCGGGTAAAAGGGAAGAGAGGGATGTAGGG
CATTCAGCATGATCGGAGGAAAGGCTGCTGCAACCAAAGAATGATGACGG
CACCTGCAGGCTGTTGGAGATGGGCTCACTCCCTTTATCCCTTTCGGCCG
CCCGTCTATTGTCTTGTTTCCGCTTGAGATTGCTGCC
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Coding sequence (CDS) from alignment at CM002470.1:561281..562767-

>rna7148 ID=rna7148|Name=rna7148|organism=Nannochloropsis gaditana|type=CDS|length=1107bp|location=Sequence derived from alignment at CM002470.1:561281..562767- (Nannochloropsis gaditana)
ACAGGGGAAGTGGTGGAATTTCAAATGGTGCAAGGAGACAAAGGTCGCCG
GGCGGTCAATGTGACGGCCCCGGGGGGGGAGGCGCTTCCTCCCAGGAATA
ACGCGGACCGCCCCATGGGCTCGAGGGGGGGAGACTACTCGGGGCCGAGA
GAGTAAGGCTATGGCTTCATCACGCCGGAGGATGGGTCAGAGGACGTGTT
TCTGCACCAGACACAAATTAGGCGGGTGGGCTTCCGTTTTGTCAATATGC
TTTCCCGCCTTGCCCTCACGATGCGCTCCAGCCTGGCTGTGACTGCTCGA
GCTTGCAGCAGCAGCAGCACCACACCCACTATCCATCAAGGCACCGTCCG
GGCGTTTGACTCCCGTCGAACAGGGGAAGTGGTGGAATTTCAAATGGTGC
AAGGAGACAAAGGTCGCCGGGCGGTCAATGTGACGGCCCCGGGGGGGGAG
GCGCTTCCTCCCAGGAATAACGCGGACCGCCCCATGGGCTCGAGGGGGGG
AGACTACTCGGGGCCGAGAGAGTAAGGCTATGGCTTCATCACGCCGGAGG
ATGGGTCAGAGGACGTGTTTCTGCACCAGACACAAATTAGGCGGGTGGGC
TTCCGTTTTGTCAATATGCTTTCCCGCCTTGCCCTCACGATGCGCTCCAG
CCTGGCTGTGACTGCTCGAGCTTGCAGCAGCAGCAGCACCACACCCACTA
TCCATCAAGGCACCGTCCGGGCGTTTGACTCCCGTCGAACAGGGGAAGTG
GTGGAATTTCAAATGGTGCAAGGAGACAAAGGTCGCCGGGCGGTCAATGT
GACGGCCCCGGGGGGGGAGGCGCTTCCTCCCAGGAATAACGCGGACCGCC
CCATGGGCTCGAGGGGGGGAGACTACTCGGGGCCGAGAGAGTAAGGCTAT
GGCTTCATCACGCCGGAGGATGGGTCAGAGGACGTGTTTCTGCACCAGAC
ACAAATTAGGCGGGTGGGCTTCCGTTTTGTCAATATGCTTTCCCGCCTTG
CCCTCACGATGCGCTCCAGCCTGGCTGTGACTGCTCGAGCTTGCAGCAGC
AGCAGCACCACACCCACTATCCATCAAGGCACCGTCCGGGCGTTTGACTC
CCGTCGA
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Synonyms
Publications