EWM23630.1, cds7055 (CDS) Nannochloropsis gaditana

Overview
NameEWM23630.1
Unique Namecds7055
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:379893..380191 +
Alignment locationCM002470.1:380325..380590 +
Alignment locationCM002470.1:380724..382161 +
Alignment locationCM002470.1:382363..382996 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23630.1
Productcullin protein 1
Orig transcript idgnl|cribi|Naga_100137g4.32.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:379893..380191 +
CM002470.1supercontigCM002470.1:380325..380590 +
CM002470.1supercontigCM002470.1:380724..382161 +
CM002470.1supercontigCM002470.1:382363..382996 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0031625ubiquitin protein ligase binding
Vocabulary: INTERPRO
TermDefinition
IPR016159Cullin_repeat-like_dom
IPR001373Cullin_N
IPR016158Cullin_homology
Homology
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|585104781|gb|EWM23630.1| (cullin protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1771.9 bits (4588), Expect = 0.000e+0
Identity = 878/878 (100.00%), Postives = 878/878 (100.00%), Query Frame = 0
Query:    1 MSSRITRSSSGGGVSSPPSVSFSERAGVAGPLEASPVGPRCAGGSNSTLAIRFQIQDKEQVDALWERVRIEVLDPLEAALANFDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGVTTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRREMLTVAAAQAAASAAAAVAVKEMSAQAAAAAAAALGGPSRGHDTPPSTPPSVSYASRTSSTPHAPPPHPSFSPASPELASLSTLSLAPGPLTPADPSASASPPSLVPTHSSSSEHPLLDRMGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTREEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGELRKAGFLRMETRKGGREGGGKGRRGEHPRRS 878
            MSSRITRSSSGGGVSSPPSVSFSERAGVAGPLEASPVGPRCAGGSNSTLAIRFQIQDKEQVDALWERVRIEVLDPLEAALANFDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGVTTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRREMLTVAAAQAAASAAAAVAVKEMSAQAAAAAAAALGGPSRGHDTPPSTPPSVSYASRTSSTPHAPPPHPSFSPASPELASLSTLSLAPGPLTPADPSASASPPSLVPTHSSSSEHPLLDRMGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTREEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGELRKAGFLRMETRKGGREGGGKGRRGEHPRRS
Sbjct:    1 MSSRITRSSSGGGVSSPPSVSFSERAGVAGPLEASPVGPRCAGGSNSTLAIRFQIQDKEQVDALWERVRIEVLDPLEAALANFDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGVTTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRREMLTVAAAQAAASAAAAVAVKEMSAQAAAAAAAALGGPSRGHDTPPSTPPSVSYASRTSSTPHAPPPHPSFSPASPELASLSTLSLAPGPLTPADPSASASPPSLVPTHSSSSEHPLLDRMGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTREEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGELRKAGFLRMETRKGGREGGGKGRRGEHPRRS 878          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|397563350|gb|EJK43762.1| (hypothetical protein THAOC_37760, partial [Thalassiosira oceanica])

HSP 1 Score: 116.316 bits (290), Expect = 6.260e-23
Identity = 89/355 (25.07%), Postives = 160/355 (45.07%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGG-----TREEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRY-EEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGEL 848
            M  I++  + S GEA  E R +RL K+ + +  DP ++++L+++H +Y+ +      +H +F+  L  +F  I+N                                  GQ     L+++ CDR+L+ GG     T  E K+ +I+ L  +L DKD F   YR +L +RLL  R     AEK+ IA+L+++ G  +    + MLN+ A   E    F          + ++ + F V V++ G WP   ++     + PP +   ME F  ++      + ++L WV   G   V+ATY     G + +++       + L AF  +++KS     L+++  +    L  ++  L
Sbjct:  323 MADIVQKFITSQGEACVEKRESRL-KNEKDKNDDPEFVKSLIDLHEKYLGVIRETFASHHLFQKALKNSFEEIVNHDV-------------------------------GQYSNADLMSTFCDRILKSGGEKLSDTEVEQKLDQIVKLFSFLNDKDVFAEIYRNQLAKRLLNQRSASNDAEKAMIAKLKLQCGTQFTSKMEGMLNDLAVGAEQKSEFDQRME-----QLDTKLGFGVQVLSNGNWP---SYQAPVVQLPPQMSKCMEVFQEWHDKK--HQKRRLTWVHSLGNASVKATY-----GKKTYDLQVTTLQAVVLNAF--NDNKSYGFNELKQKLNVDDKTLKPIMHSL 628          

HSP 2 Score: 71.2478 bits (173), Expect = 5.268e-9
Identity = 74/332 (22.29%), Postives = 139/332 (41.87%), Query Frame = 0
Query:   60 QVDALWERV--RIEVLDPLEAALAN-FDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHD---GYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            Q++  W  V  + + +D LE  L + FD   T    K+Y  +Y++ Y +    +  +  R   +  +H ET+  YL    LP+L          LL+ +  +W  + ++N WL K   +++R Y+ +      L++ GL+ F   ++  S +     ++  ID                    R G  +   EK   ++ VEL    G+      T +L+  LL   R ++  +   W+     P+            YM + E AL  E+  + ++ L+ A   +   V   E++Q    +++ +E  GC  LL   + ++L  M++L  R
Sbjct:   24 QLEEGWNNVIKKGQAIDVLEKTLDDGFD---TCFEPKEYIRIYTTCYDMCTQRSPYNWSRD--LYTRHGETIEQYLRNTVLPALQNKTGQGGTILLQELKHRWTNHQIMNKWLKKFFTYLDRYYV-KHHSLPTLEQAGLQHFKAEIYMNSKENSTSAIISLIDE------------------EREGEII---EKSLVKSIVELYESMGMGSLDAYTNDLEQPLLEGTRSFYGRKREDWIAKDSTPD------------YMIKAERALGEEKARVTDY-LNPATEPKLRRVVEDEILQKVQTNLLEKEGSGCTVLLANDKTDDLKRMFQLFSR 315          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|219124703|ref|XP_002182637.1| (CULlin protein 1 [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405983|gb|EEC45924.1| CULlin protein 1 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 115.546 bits (288), Expect = 8.256e-23
Identity = 93/345 (26.96%), Postives = 153/345 (44.35%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-EEAKVKE----ILGLVLYLRDKDFFEGCYRTELMRRLLANR-YEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYM-ECFSSFYLGLDIGRGK-KLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGM 836
            +  I++  + S+G+ + + R ARL    + +  DP +++A++E+H +Y+ +       H +F+  L  AFV I+N      T +                                L+++ CDR+L+ GG +  EA+V+E    I+ L  YL DKD F   YR +L +RLL  R   + AEK  IA+L+V+ G  +    + ML + A   +    F            E+ +DFSV V+  G WP   +       P   L   M +C   F    ++   K KL WVL +G   V+ T+     G + +E+  +    + L A S  E  +LS   L +R  +
Sbjct:  311 IAAIVQEFITSMGQEILKRRQARLDGGEKDKNDDPKFVKAIIELHEKYLGVVKKDFSGHSLFQKALKDAFVEIVNKNVGSFTNAE-------------------------------LMSTFCDRILKSGGEKLSEAEVEESLDRIVQLFSYLTDKDLFAEIYRNQLSKRLLNQRSTSDDAEKLMIAKLKVQCGTQFTSKMEGMLADLAVGSQQRTEFEQRMRQV-----ETSLDFSVQVLTTGFWPTYKS-------PQVTLTEEMNKCMKVFREWHELKHQKRKLGWVLTQGSATVRGTF-----GKKSYEIQVSTLQAIALDALSGGE--TLSFEDLSQRLNL 605          

HSP 2 Score: 70.4774 bits (171), Expect = 1.109e-8
Identity = 77/339 (22.71%), Postives = 140/339 (41.30%), Query Frame = 0
Query:   65 W-ERVRIEVLDPLEAALAN---------FDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSL---AAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGVTT------ELKDRLLASARKYFAGRAALWMGG-----LGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            W + ++ + +D LEA L           F PR       +Y ++Y++ Y +    +  +  R   +  +H ET+  YL    +P+L          LL  +  +WG + ++N WL K   +++R Y+ +      L + GLR F   V+    +     ++  I++                   R G  +D   K   ++ VEL    G+ +      +L++ LL S R+++A R   W+       L   EE  +E+ SRV  Y                   LS +   + L V  +E+++     ++ +E  GC  LL+  + E+L  M+RL +R
Sbjct:   15 WNDEIKAKAIDKLEAMLNGGLKSGETNMFGPR-------EYVQIYTTCYDMCTQRSPYNWSRE--LYQRHGETIERYLASTVIPALRDKTGQGGTTLLTELQHRWGDHQIMNKWLKKFFTYLDRYYV-KHHSLPTLSQAGLRCFRTHVYDEMKRETTAAILGLIND------------------EREGQIID---KSLVKSIVELYENMGMGSLDAYNGDLEEPLLQSTREFYAKRREEWINDSTPDYLVKAEEALQEERSRVADY-------------------LSSSSEPKILRVVEEEILEKVELVLLEKETSGCRALLQNDKSEDLSRMFRLFQR 303          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|1173949084|gb|OQR97158.1| (CULlin protein 1 [Achlya hypogyna])

HSP 1 Score: 115.546 bits (288), Expect = 8.842e-23
Identity = 87/359 (24.23%), Postives = 162/359 (45.13%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLE-AHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-----EEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANR-YEEGAEKSAIARLRVEHGVHYAQHSQRMLNETAT---SKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGEL 848
            +  ++  H+ ++G  + E R A +A D   + A DP +I+ +L +H +Y ++     G + +F+  L  AFV  +N    K  ++                               +L+++ CDR+L+ GG +      E  +++I+ +  YL DKD F   YR +L +RLL  R   + AE S I++L++  G  +    + MLN+ A     +    +FL   PPA      + ++F V V+  G WP   ++       PP +V YM  F  +Y      R  +L WV   G   V+AT+P     ++ +++       + LL F+  ++ + +   ++E   +++  +  +L  L
Sbjct:  307 IATLVRRHIETVGNEIVERRTAAIASDNIKDPASDPTFIKDILALHDKYKQVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSA-------------------------------KLMSTFCDRILKSGGEKLSDDQVEDFLQKIVSVFSYLTDKDLFAEIYRNQLAKRLLNQRSSSDDAEISMISKLKMCCGAQFTSKMEGMLNDLAIGGDHQAEFDAFLKKNPPA-----GTAIEFGVQVLTTGHWP---SYTPLDLSLPPQMVRYMSLFKMYYDSKTSHR--RLQWVHSLGNATVRATFPK----NKWYDLQVTTLQAVALLLFNAGDAATFTFEHIKESLNLSEDVVKRILHSL 620          

HSP 2 Score: 93.5893 bits (231), Expect = 6.897e-16
Identity = 73/299 (24.41%), Postives = 126/299 (42.14%), Query Frame = 0
Query:   93 KKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGP------EEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            ++Y  +Y+  Y +     R   +    +  +H ET T YL    LP L   HD +LL  +  +W  + ++N W+ K  ++++R Y+ +      L E GL  F  +VF    +     +V A+  +V +               R G  VD       R C+E+    G+       T+ ++  +  +  Y+A +A  W+ G   P      E+  + ++SRV  YM         E  LLR  ++              EL++ H + ++ RE  GC  LL+  + E+L  M+RL  R
Sbjct:   44 QQYMPIYTICYDMCT--QRTPYNWSAQLYTRHGETFTEYLRSSVLPELQNQHDEFLLNELHRRWQNHKLMNKWMAKFFMYLDRYYV-KHNALPTLAEAGLNAFKTVVFQSIKKD----VVDAMLELVEK--------------EREGEIVDT---TLLRNCIEVFETMGMGSLDVYITDFEEPFIKRSTAYYATKAQTWLEGDSTPAYMIKTEDCLKSESSRVARYMHSTT-----EAKLLRALEI--------------ELLEKHQKHLLERENSGCIALLQNDKAEDLSRMFRLFSR 299          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|1210524633|dbj|GAX16533.1| (cullin 1 [Fistulifera solaris])

HSP 1 Score: 114.39 bits (285), Expect = 1.930e-22
Identity = 92/329 (27.96%), Postives = 151/329 (45.90%), Query Frame = 0
Query:  503 ILEAHVISLGEALQEDRNARL--AKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-EEAKVKE----ILGLVLYLRDKDFFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESC-VDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVS--YMECFSSFYLGLDIGRGK-KLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSID 820
            I+E  +  +G    + R AR+   KD+     DP +I+AL+ +H +Y+ +  +    H +F+  L  AFV ++N                                  GQ     L+++ CDR+L+ GG +  EA+++E    I+ L  YL DKD F   YR +L +RLLA+R  E AEK  IA+L+V+ G  +    + ML++ A   +    F         +R+E   +DFSV V+  G WP        S + P V ++    +C + F    D    K KL W++ +G   V+ T+     G + +E+     M++ L A  +D
Sbjct:  311 IVETFITEVGMEEVQRRQARVDGEKDKN---DDPSFIKALIGLHDKYLAVVKNDFAGHSLFQKALKNAFVEVMNTNV-------------------------------GQFTNAELMSTYCDRILKSGGEKLSEAEIEESLDKIVQLFTYLTDKDMFAEIYRNQLAKRLLASRSSEDAEKLMIAKLKVQCGTQFTSKMEGMLSDLAVGGQQRQEFEQR------IRQEKIPLDFSVLVLTTGFWP--------SYKSPEVTLTDEMQKCMNIFRDWHDQKHQKRKLQWIMTQGNATVRGTF-----GKKTYEL-----MVVTLQAVVLD 581          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|669138794|ref|XP_008604965.1| (hypothetical protein SDRG_01226 [Saprolegnia diclina VS20] >gi|530743009|gb|EQC41251.1| hypothetical protein SDRG_01226 [Saprolegnia diclina VS20])

HSP 1 Score: 114.39 bits (285), Expect = 1.986e-22
Identity = 89/360 (24.72%), Postives = 163/360 (45.28%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLE-AHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR------EEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANR-YEEGAEKSAIARLRVEHGVHYAQHSQRMLNETAT---SKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGEL 848
            +  ++  H+ ++G  + E R A +A D   + + DP +I+ +L +H +Y  +     G + +F+  L  AFV  +N    K  ++                               +L+++ CDR+L+ GG +      EE  VK I+ +  YL DKD F   YR +L +RLL  R   + AE S I++L++  G  +    + MLN+ A     +    +F+   PP+ A+     ++F V V+  G WP   ++       PP +V YM  F  +Y      R  +L WV   G   V+AT+P     ++ +++       + LL F+  ++++ +   L+E   +++  +  +L  L
Sbjct:  307 IATLVRRHIETVGNEIVERRTAAIASDNIKDPSSDPTFIKDILALHDKYKLVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSA-------------------------------KLMSTFCDRILKSGGEKLSDDQVEEYLVK-IVSVFSYLTDKDLFAEIYRNQLAKRLLNQRSSSDDAEISMISKLKMCCGAQFTSKMEGMLNDLAIGGDHQTEFDAFMKKNPPSGAV-----IEFGVQVLTTGHWP---SYTPLDISLPPQMVRYMSLFKMYYDSKTSHR--RLQWVHSLGNATVRATFPK----NKWYDLQVTTLQAVALLLFNASDTEAFTFEHLRESLNLSEDVVKRILHSL 620          

HSP 2 Score: 98.2117 bits (243), Expect = 2.854e-17
Identity = 83/336 (24.70%), Postives = 143/336 (42.56%), Query Frame = 0
Query:   58 KEQVDALWERVRIEVLDP--LEAALANFDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGP------EEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            KEQ+      + +++LD    + A   F P++       Y  +Y+  Y +     R   +    +  +H ET T YL +  LP L   HD +LL  +  +W  + ++N W+ K  ++++R Y+ +      L E GL  F  +VF    +G    +V A+  +V +               R G  VD       R C+E+    G+       T+ ++  +  +  Y+A +A  W+ G   P      E+  + ++SRV  YM         E  LLR  ++              EL++ H ++++ RE  GC  LL+  + E+L  MYRL  R
Sbjct:   14 KEQIKPKGIDILLDILDKGFDKVAACPFPPQS-------YMPIYTICYDMCT--QRTPYNWSAQLYTRHGETFTEYLRQKVLPELQNQHDEFLLNELHRRWQNHKLMNKWMSKFFMYLDRYYV-KHNALPTLAESGLNAFKSVVF----EGIKKDVVDAMLELVEK--------------EREGEIVDT---TLLRNCIEVFETMGMGTLDVYVTDFEEPFIKRSTAYYATKAQTWLEGDSTPAYMIKTEDCLKSESSRVARYMHSTT-----EAKLLRALEI--------------ELLEKHQKTLLERENSGCIALLQNDKSEDLSRMYRLFSR 299          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|1210511905|dbj|GAX29145.1| (cullin 1 [Fistulifera solaris])

HSP 1 Score: 114.39 bits (285), Expect = 2.205e-22
Identity = 94/329 (28.57%), Postives = 151/329 (45.90%), Query Frame = 0
Query:  503 ILEAHVISLGEALQEDRNARL--AKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-EEAKVKE----ILGLVLYLRDKDFFEGCYRTELMRRLLANRYEEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESC-VDFSVTVMAQGGWPVPAAFAQFSCRPPPV-LVSYME-CFSSFYLGLDIGRGK-KLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSID 820
            I+E  +  +G    + R AR+   KD+     DP +I+AL+ +H +Y+ +  +    H +F+  L  AFV ++N                                  GQ     L+++ CDR+L+ GG +  EA+++E    I+ L  YL DKD F   YR +L +RLLA+R  E AEK  IA+L+V+ G  +    + ML++ A   +    F         +R+E   +DFSV V+  G WP        S + P V L   M+ C + F    D    K KL W++ +G   V+ T+     G + +E+     M++ L A  +D
Sbjct:  312 IVETFITEVGMEEVQRRQARVDGEKDKN---DDPSFIKALIGLHDKYLAVVKNDFAGHSLFQKALKNAFVEVMNTNV-------------------------------GQFTNAELMSTYCDRILKSGGEKLSEAEIEESLDKIVQLFTYLTDKDMFAEIYRNQLAKRLLASRSSEDAEKLMIAKLKVQCGTQFTSKMEGMLSDLAVGGQQRQEFEQR------IRQEKIPLDFSVLVLTTGFWP--------SYKSPEVTLTDQMQRCMNIFRDWHDQKHQKRKLQWIMTQGNATVRGTF-----GKKTYEL-----MVVTLQAVVLD 582          

HSP 2 Score: 69.3218 bits (168), Expect = 2.432e-8
Identity = 81/373 (21.72%), Postives = 153/373 (41.02%), Query Frame = 0
Query:   65 W-ERVRIEVLDPLEAALANFDPRATEVVR---KKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHD---GYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRREMLTVAAAQAAASAAAAVAVKEMSAQAAAAAAAALGGPSRGHDTP 424
            W E ++ + LD L+  L N D +  +      K+Y ++Y++ Y +    +  +  R   +  +H ET+  YL    LP+L          LL  +  +W  + ++N WL K   +++R Y+ +      L + GLR F   V+          ++  I++                   R G  +D   K   ++ VEL    G+      T +L+  LL S R+++A +   W+     P+            YM + E AL  E   + E+ L+ +   + L V  +E+++     ++ +E  GC  LL+  + E+L  M+RL +R    +       ++     + E+  +      A + G    +D P
Sbjct:   13 WNEEIKAKALDKLQNIL-NEDMQTGQTNLFGPKEYVQIYTTCYDMCTQRSPYNWSRE--LYQRHGETIEQYLNDYVLPALKDKPRQGPNILLTELQHRWKNHQIMNKWLKKFFTYLDRYYV-KHHSLPTLSQAGLRCFRSHVYDVMKADTTQAILSLIND------------------EREGKIID---KTLVKSIVELYESMGMGSLEAYTADLEQPLLESTREHYARKREEWIND-STPD------------YMIKAEGALREESDRVAEY-LNSSSESKILKVLEEEILERVEMVLLEKETSGCRALLQNDKSEDLNRMFRLFQR----LENGLVPIASIVETFITEVGMEEVQRRQARVDGEKDKNDDP 342          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|813109733|ref|XP_012194667.1| (hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65] >gi|641541251|gb|KDO35014.1| hypothetical protein SPRG_01077 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 112.849 bits (281), Expect = 6.100e-22
Identity = 87/359 (24.23%), Postives = 163/359 (45.40%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLE-AHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-EEAKVKE----ILGLVLYLRDKDFFEGCYRTELMRRLLANR-YEEGAEKSAIARLRVEHGVHYAQHSQRMLNETAT---SKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGKKLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNLDIVLGEL 848
            +  ++  H+ ++G  + E R A +A D   + + DP +I+ +L +H +Y  +     G + +F+  L  AFV  +N    K  ++                               +L+++ CDR+L+ GG +  + +V+E    I+ +  YL DKD F   YR +L +RLL  R   + AE S I++L++  G  +    + MLN+ A     +    +F+   PP+ A+     ++F V V+  G WP   ++       PP +V YM  F  +Y      R  +L WV   G   V+AT+P     ++ +++       + LL F+  ++ + +   L+E   +++  +  +L  L
Sbjct:  307 IATLVRRHIETVGNEIVERRTAAIASDNIKDPSSDPTFIKDILALHDKYKLVVQEQFGGNSLFQKALKEAFVEFVNKDVGKDCSA-------------------------------KLMSTFCDRILKSGGEKLSDDQVEEFLLKIVSVFSYLTDKDLFAEIYRNQLAKRLLNQRSSSDDAEISMISKLKMCCGAQFTSKMEGMLNDLAIGGDHQTEFDAFMKKNPPSGAV-----IEFGVQVLTTGHWP---SYTPLDISLPPQMVRYMSLFKMYYDSKTSHR--RLQWVHSLGNATVRATFPK----NKWYDLQVTTLQAVALLLFNASDTDAFTFEHLRESLNLSEDVVKRILHSL 620          

HSP 2 Score: 97.0561 bits (240), Expect = 5.794e-17
Identity = 83/336 (24.70%), Postives = 142/336 (42.26%), Query Frame = 0
Query:   58 KEQVDALWERVRIEVLDP--LEAALANFDPRATEVVRKKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGP------EEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            KEQ+      + +++LD    + A   F P++       Y  +Y+  Y +     R   +    +  +H ET T YL    LP L   HD +LL  +  +W  + ++N W+ K  ++++R Y+ +      L E GL  F  +VF    +G    +V A+  +V +               R G  VD       R C+E+    G+       T+ ++  +  +  Y+A +A  W+ G   P      E+  + ++SRV  YM         E  LLR  ++              EL++ H ++++ RE  GC  LL+  + E+L  MYRL  R
Sbjct:   14 KEQIKPKGIDILLDILDKGFDKVAACPFPPQS-------YMPIYTICYDMCT--QRTPYNWSAQLYTRHGETFTEYLRTKVLPELQNQHDEFLLNELHRRWQNHKLMNKWMSKFFMYLDRYYV-KHNALPTLAESGLNAFKSVVF----EGIKKDVVDAMLELVEK--------------EREGEIVDT---TLLRNCIEVFETMGMGTLDVYVTDFEEPFIKRSTAYYATKAQTWLEGDSTPAYMIKTEDCLKSESSRVARYMHSTT-----EAKLLRALEI--------------ELLEKHQKTLLERENSGCIALLQNDKSEDLSRMYRLFSR 299          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|223993941|ref|XP_002286654.1| (cullin [Thalassiosira pseudonana CCMP1335] >gi|220977969|gb|EED96295.1| cullin [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 112.464 bits (280), Expect = 7.667e-22
Identity = 94/350 (26.86%), Postives = 151/350 (43.14%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGG-----TREEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRY-EEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYM-ECFSSFYLGLDIGRGK-KLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSIDESKSLSLAALQERTGMTKGNL 841
            M  I+E  + + G A  + R ARL    + +  DP ++++L+++H +Y+ +   V  +H +F+  L  +F  I+N+                                 GQ     L+++ CDR+L+ GG     T  E  +  I+ L  +L DKD F   YR +L +RLL  R   + AEK  IA+L+V+ G  +    + MLN+ A   +    F      A   ++ S + F V V+  G WP   A       P   L + M EC   F    D    K KL WV   G   V+AT+     G + +++       + L AF  +E K+L L  L++   +    L
Sbjct:  255 MATIVENFITAQGNACIDKRQARLDSGEKDKNDDPEFVKSLIDLHEKYLGVIREVFASHHLFQKALKNSFEEIINNDV-------------------------------GQFSNAELMSTFCDRVLKSGGEKLSETEVEQSLDRIVQLFSFLTDKDLFAEIYRNQLAKRLLNQRSASDDAEKLMIAKLKVQCGTQFTSKMEGMLNDLAVGSDQKSEF-----DARMSQQGSSLSFGVQVLTTGFWPSYKA-------PEVALPTQMTECMEVFKEWHDNKHQKRKLTWVHSLGNATVRATF-----GKKSYDLQVTTLQAVVLNAF--NEGKTLGLEDLKKTLNLDDQTL 554          
BLAST of EWM23630.1 vs. NCBI_GenBank
Match: gi|676378097|ref|XP_009032327.1| (hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens] >gi|323456805|gb|EGB12671.1| hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens])

HSP 1 Score: 108.997 bits (271), Expect = 1.105e-20
Identity = 90/359 (25.07%), Postives = 156/359 (43.45%), Query Frame = 0
Query:  500 MGVILEAHVISLGEALQEDRNARLAKDRRLEAHDPLYIEALLEMHAEYVELTTSVLGAHRVFKSRLHAAFVAILNDQTSKPTASSASRHLPRQARTQGSRPLGGNLSLRGQEEKPRLITSACDRLLRVGGTR-----EEAKVKEILGLVLYLRDKDFFEGCYRTELMRRLLANRY-EEGAEKSAIARLRVEHGVHYAQHSQRMLNETATSKELVHSFLHSYPPALALRRESCVDFSVTVMAQGGWPVPAAFAQFSCRPPPVLVSYMECFSSFYLGLDIGRGK-KLDWVLREGLLVVQATYPSSSGGSRRFEVSSNPHMLLPLLAFSID---ESKSLSLAALQERTGMTKGNLDIVLGEL 848
            M  ++ AH+ ++G  +   R ARL    +    DP +++ LL +H +Y+ + ++    + +F+  L  AFV   N    K T +                                L++S CDR+L+ GG +      E+ +++ + L  YL DKD F   YR +L +RLL  R   + AE+  I +L++  G  +    + MLN+ A   +    F  +     + +    +DF+V V+  G WP   +FA      PP +V     F  +Y   D    K +L W+   G   V+  +     G + ++   +    + LLAF+ D    + SL+  A++ER  +   +L  VL  L
Sbjct:  307 MAALVRAHIEAMGNEVINRREARLEAGEKDSNQDPAFVKELLALHDKYMAVVSAQFAGNALFQKALKEAFVEFTNRDVGKFTNAE-------------------------------LMSSFCDRILKSGGEKLSDEDVESYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQSDFDQTVKEDKS-KSLGKLDFAVQVLTTGYWP---SFAAIDAHLPPEIVQCTRVFKDYY---DTKNSKRRLTWMFSLGNASVKGAF-----GKKSYDFQVSTLQAIALLAFNADGDGAAPSLAYDAVRERINLPDEHLKRVLHSL 622          

HSP 2 Score: 92.0485 bits (227), Expect = 1.963e-15
Identity = 73/320 (22.81%), Postives = 143/320 (44.69%), Query Frame = 0
Query:   68 VRIEVLDPLEAALAN-FDPRATEVVR-KKYYEVYSSVYHVVNDPNRDDLDRHPLILAKHLETLTSYLERVTLPSLAAAHDGYLLRAVGEQWGRYVVLNNWLHKLLIFVERSYLGRQPGKMGLKERGLRQFSKIVFSRSGQGRLLPLVLAIDNVVTRWRSQGEGDNGGGAGGRTGPTVDADEKEACRACVELLVETGV------TTELKDRLLASARKYFAGRAALWMGGLGGPEEGGREDASRVGWYMRRVETALLHEEGLLREFDLSRALGEESLVVAVQELVQAHGESVVTREVGGCAWLLRQRRYEELGLMYRLLRR 379
            ++ + +D LE  L N FD ++  +   K+Y + Y++ Y++     R   +    +  +H ET+  YL +  LP+L   H+ +LL  + ++W  + ++N W+    ++++R Y+ +      L   GL+ F  +V++   +  +  ++  ID                    R    +D   +   + CVELL   G+       T+ +D+LL S ++Y+A ++  W+     P             Y+ + E AL  E+  +  + L+ A   + L V   E+++     ++ +E  GC  LL   +  +L  MYRL  R
Sbjct:   17 IKAKAIDVLEEMLNNGFDQKSQRLFAPKEYVQTYTTCYNMCT--QRSPYNWSEQLYQRHGETICDYLTKTVLPALRHQHNDFLLTELTKRWANHKIMNKWMRLFFMYLDRYYV-KHHSLPTLDVAGLKHFKTLVYNEVKKDVVNAMIGLID------------------AERDEKLID---RGLVKNCVELLEAMGMGSLDAYVTDFEDQLLGSTKEYYARKSQEWVETDDTPT------------YLAKAEVALDAEKARVAHY-LNSASEPKLLRVCEHEILELRETVLLEKEGSGCRALLANDKAADLSRMYRLFSR 299          
The following BLAST results are available for this feature:
BLAST of EWM23630.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104781|gb|EWM23630.1|0.000e+0100.00cullin protein 1 [Nannochloropsis gaditana][more]
gi|397563350|gb|EJK43762.1|6.260e-2325.07hypothetical protein THAOC_37760, partial [Thalass... [more]
gi|219124703|ref|XP_002182637.1|8.256e-2326.96CULlin protein 1 [Phaeodactylum tricornutum CCAP 1... [more]
gi|1173949084|gb|OQR97158.1|8.842e-2324.23CULlin protein 1 [Achlya hypogyna][more]
gi|1210524633|dbj|GAX16533.1|1.930e-2227.96cullin 1 [Fistulifera solaris][more]
gi|669138794|ref|XP_008604965.1|1.986e-2224.72hypothetical protein SDRG_01226 [Saprolegnia dicli... [more]
gi|1210511905|dbj|GAX29145.1|2.205e-2228.57cullin 1 [Fistulifera solaris][more]
gi|813109733|ref|XP_012194667.1|6.100e-2224.23hypothetical protein SPRG_01077 [Saprolegnia paras... [more]
gi|223993941|ref|XP_002286654.1|7.667e-2226.86cullin [Thalassiosira pseudonana CCMP1335] >gi|220... [more]
gi|676378097|ref|XP_009032327.1|1.105e-2025.07hypothetical protein AURANDRAFT_52007 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7072rna7072Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications