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Properties
| Property Name | Value |
|---|
| Product | dihydrolipoamide succinyltransferase |
| Orig transcript id | gnl|cribi|Naga_100165g9.9690.mrna |
| Orig protein id | gnl|cribi|Naga_100165g9.9690 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:326733..328527 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna7052 ID=rna7052|Name=rna7052|organism=Nannochloropsis gaditana|type=mRNA|length=1375bp
TGAGGTCGAGGACCTTCGCTGTGATGTCTCCACTGGCTTGCGAGGCTCCA
GTGAACGGCATGACTCCCGAGTGTGGATATATAAATAAGGCGTCTTGGCG
TTCGGGCCGTATATAAAGCTGGGGACTCTTCCTATCGCACACTCACAGGG
TGGTTTCTGGCTGAATTGGCTAGAGTGTTAAATGATTTTGATCTTTTCTA
AGACCAGCATTAAAAGTCTGAGTCCAGCTCTCCAGGATGTTCTTACTTCT
CTGTTTCGTCATGCGCTCGTGGCCACAGCCTCTTGTTTGTTGGCATGTCA
GCAAGGAATAACTACAAACCTCACTTATTCATTTATCTTCCATATCAATT
GAGCAGGTGAACTTACAAGGGTCTTGCTTCGCAATCCAAAGTCAGATGGT
CCTTGAATTTTTGACCCCCCGGAAATGGGATATATTGACCCCAAAGGCTA
AGGACACCCAGGAAGCACTGCGAATCGAGCTCGAAAAAATGACTGCTCAC
TTTCCTGCGGCCAAAGAGAAAGACTTGAAACGCTTTTTAATGGGTTTCCA
TACGAAGGCAGACAAGGCTATTCCAGCTTACGAGGCGCACTTGCATTGGC
GGGCTCAAAATCTTCCTATTGCCAAAGAATCTTGTTTGAAGGAGCTCCAA
AAAGGGCGTTTCTATTTTCATGGGATGGATCTAGAAGGGCGTCCTGTAGC
CTATTACTCACTTGCATGCCATGACCCAAAACATTGCGACATATCAGAAA
TTATGCGTATGATGACTTATCAGGTCGAAAAGGTGTTGGCTGAGATGCCA
GATGATGTGAAAGGCTTTACAATTGTTTGGGATACGCGCAATACGGGTAT
AAAGAACACAGACACGGAATTTCTCCGCGAGTTTCTCAATTTTTTCCGCG
CCCAGTACCCGGAGGTTCTTGCTCAACTGCTGATCGTTCCCGTCGGATTT
TTCCAAAGGACGATGTGGAACACATTCGCGCGCTTTTTGGACGAGCGCAG
AGCGTCTCGCATTCGTATGGTCGCGACGATGGAGGACTTGCGAGATTACA
TTTCTGAGAAAGAACTTCTGACGACCCATGGGGGTAAGAATACTTGGCAT
TTTGATCCAGACAACGCCTAAGAATGGAAAATTGTCCGTGCACTTCCTCG
CCCGATATTCAAAGGTCCAGATGTTATTTTTTCCATCACGTTATGAGATG
GACTGTTCAGGTGACTGGTGTGTATGTTCTTTGTAAGCTACGAATTTTAA
CGTGTATAGGAGAAGGGTACTACGCTGTTACATGGACACACAAACAGACG
CGCTCAATCGTGCATGAAAGGTACTGAATTCAGAAGAAAGACACGTGAAA
GTAAGATAGCGCCGAGTATTGCTGG back to topprotein sequence of rna7052 >rna7052-protein ID=rna7052-protein|Name=rna7052|organism=Nannochloropsis gaditana|type=polypeptide|length=465bp
MMLRRGLWSTSSRLQGNIRAAAGRAGHIRLTTQAAPVTNLVHAFSNSTLS
TLPHQGPCRPIPAWSTHRSLPIRALSASAGQDFILNVPSMGDSITEGTIV
NWQKKVGDWVDADDVIVVLETDKVSVDVRAPRSGIITEVIGAEDDTVGVG
VPLAKIDTTAAKPEGAAQSSAPPPTPPPPPPKAEAAAAPPPPSSPPPPSP
PSTPPKPPTPAPAPVAPGGASTGGPSAPGNRSETRVKMNRMRLRIAERLK
SAQNTAAMLTTFQEVDMGNLMDMRKAYKEEFEKVHGVKLGFMSAFVKAST
AALQEIPAVNAFIDDGTKEIVYRDYCDVSVAVASPAGLVVPVLRNAERMS
FAGVERQIAMYGKKAKEGALALEDMAGGTFTISNGGVFGSLLGTPIINPP
QSAILGMHATKMRAVVGKDGQVMARPMMYLALTYDHRLIDGREAVTFLKS
VAAKIEDPRRMVLEL back to topmRNA from alignment at CM002470.1:326733..328527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna7052 ID=rna7052|Name=rna7052|organism=Nannochloropsis gaditana|type=mRNA|length=1795bp|location=Sequence derived from alignment at CM002470.1:326733..328527+ (Nannochloropsis gaditana)
ATGATGCTTCGTCGAGGCCTTTGGTCGACATCTTCCCGACTTCAAGGCAA
CATCAGGGCGGCagcggggcgggcgggggtaAGTCCAACTTTGGTTTACG
TGTGCTACAAGGTGGAaatggtgaggagggagaaaaagtcTTGAGCGGAA
CGACTGCATTAAAGAAGTTTATTCCGAGCATGCAGCGCTTATGTTTATTT
CGATTTGATGTTGTTTCAGCCGGAGTCGAATCatgtcgtccttctccccc
ctttgcGGGACATTCAGAAGAAATATCAGATAAAAATGCACTTGAAACCC
TCTGACTCCCTTGGCCGTTTACGATGTGTTGACGTCATTAGGTTTGATGC
AAGAGAGAGCAATCGTAAACGTAAATGGCCTTCAGGCATGTTTCGAACCG
TGATGATGTAGGCAGCTTGACGGGACTCaacattccctcccccttatTTC
CACAATTTTCAAATCCATACTACAGCATATTCGCTTAACTACCCAAGCTG
CTCCGGTCACGAACCTGGTCCATGCTTTTTCGAACTCCACATTGTCCACT
CTACCGCATCAGGGCCCCTGTCGTCCTATTCCGGCCTGGTCCAcccaccg
ctccctccctatccgcgcactctccgcctccgccggccAGGATTTCATCC
TGAATGTGCCGAGCATGGGTGACTCAATTACCGAGGGTACCATCGTGAAT
TGGCagaagaaggtgggggaCTGGGTGGACGCGGACGACGTTATCGTGGT
TCTGGAGACGGACAAAGTGAGCGTCGACGTGCGGGCCCCCCGCTCTGGCA
TCATCACGGAGGTGATTGGCGCCGAAGACGATACGGTGGGCGTAGGCGTG
CCTCTGGCCAAGATTGATACGACGGCAGCCAAGCCCGAGGGGGCGGCACa
atcctctgcccccccgcccaccccaccccctccccctcccaaagccgaag
ccgccgctgcgcctcctcctccttcttctcctccgccgccatccccccct
tcaaccCCCCCAAAGCCCCCCACGCCTGCACCAGCCCCCGTGGCGCCGGG
AGGGGCCAGCACTGGAGGTCCCTCAGCTCCTGGCAACCGCTCAGAAACTC
GGGTAAAGATGAACCGGATGCGTCTTCGCATCGCGGAACGTCTGAAGAGC
GCGCAAAACACGGCGGCCATGCTCACCACCTTCCAGGAAGTCGACATGGG
CAATCTGATGGACATGCGGAAGGCCTACAAGGAGGAATTCGAGAAGGTGC
ACGGGGTCAAGTTGGGCTTCATGTCCGCCTTCGTCAAAGCCTCTACCGCC
GCTTTGCAGGAGATCCCCGCCGTAAACGCTTTCATCGACGATGGCACCAA
GGAGATCGTCTACAGGGACTACTGCGACGTTTCCGTCGCTGTCGCTTCGC
CCGCGGGCCTGGTGGTGCCTGTGTTGCGGAATGCCGAGCGCATGAGCTTC
GCGGGGGTAGAAAGACAGATCGCCATGTACGggaagaaggccaaggaggg
tgCTTTggccctggaggacatggcggggGGGACCTTCACTATCTCAAACG
GCGGTGTTTTCGGGAGCCTGCTCGGCACGCCCATCATTAACCCGCCCCAG
TCAGCGATCCTGGGCATGCATGCCACCAAAATGAGGgccgtggtggggaa
ggacgggcaGGTGATGGCCCGGCCCATGATGTATTTAGCACTCACTTACG
ACCATCGACTGATTGATGGTCGTGAGGCCGTCACATTTTTGAAGTCGGTC
GCCGCCAAGATCGAGGACCCTCGGCGCATGGTTCTGGAGCTTTGA back to topCoding sequence (CDS) from alignment at CM002470.1:326733..328527+ >rna7052 ID=rna7052|Name=rna7052|organism=Nannochloropsis gaditana|type=CDS|length=2796bp|location=Sequence derived from alignment at CM002470.1:326733..328527+ (Nannochloropsis gaditana)
ATGATGCTTCGTCGAGGCCTTTGGTCGACATCTTCCCGACTTCAAGGCAA
CATCAGGGCGGCagcggggcgggcggggCATATTCGCTTAACTACCCAAG
CTGCTCCGGTCACGAACCTGGTCCATGCTTTTTCGAACTCCACATTGTCC
ACTCTACCGCATCAGGGCCCCTGTCGTCCTATTCCGGCCTGGTCCAccca
ccgctccctccctatccgcgcactctccgcctccgccggccAGGATTTCA
TCCTGAATGTGCCGAGCATGGGTGACTCAATTACCGAGGGTACCATCGTG
AATTGGCagaagaaggtgggggaCTGGGTGGACGCGGACGACGTTATCGT
GGTTCTGGAGACGGACAAAGTGAGCGTCGACGTGCGGGCCCCCCGCTCTG
GCATCATCACGGAGGTGATTGGCGCCGAAGACGATACGGTGGGCGTAGGC
GTGCCTCTGGCCAAGATTGATACGACGGCAGCCAAGCCCGAGGGGGCGGC
ACaatcctctgcccccccgcccaccccaccccctccccctcccaaagccg
aagccgccgctgcgcctcctcctccttcttctcctccgccgccatccccc
ccttcaaccCCCCCAAAGCCCCCCACGCCTGCACCAGCCCCCGTGGCGCC
GGGAGGGGCCAGCACTGGAGGTCCCTCAGCTCCTGGCAACCGCTCAGAAA
CTCGGGTAAAGATGAACCGGATGCGTCTTCGCATCGCGGAACGTCTGAAG
AGCGCGCAAAACACGGCGGCCATGCTCACCACCTTCCAGGAAGTCGACAT
GGGCAATCTGATGGACATGCGGAAGGCCTACAAGGAGGAATTCGAGAAGG
TGCACGGGGTCAAGTTGGGCTTCATGTCCGCCTTCGTCAAAGCCTCTACC
GCCGCTTTGCAGGAGATCCCCGCCGTAAACGCTTTCATCGACGATGGCAC
CAAGGAGATCGTCTACAGGGACTACTGCGACGTTTCCGTCGCTGTCGCTT
CGCCCGCGGGCCTGGTGGTGCCTGTGTTGCGGAATGCCGAGCGCATGAGC
TTCGCGGGGGTAGAAAGACAGATCGCCATGTACGggaagaaggccaagga
gggtgCTTTggccctggaggacatggcggggGGGACCTTCACTATCTCAA
ACGGCGGTGTTTTCGGGAGCCTGCTCGGCACGCCCATCATTAACCCGCCC
CAGTCAGCGATCCTGGGCATGCATGCCACCAAAATGAGGgccgtggtggg
gaaggacgggcaGGTGATGGCCCGGCCCATGATGTATTTAGCACTCACTT
ACGACCATCGACTGATTGATGGTCGTGAGGCCGTCACATTTTTGAAGTCG
GTCGCCGCCAAGATCGAGGACCCTCGGCGCATGGTTCTGGAGCTTTGAAT
GATGCTTCGTCGAGGCCTTTGGTCGACATCTTCCCGACTTCAAGGCAACA
TCAGGGCGGCagcggggcgggcggggCATATTCGCTTAACTACCCAAGCT
GCTCCGGTCACGAACCTGGTCCATGCTTTTTCGAACTCCACATTGTCCAC
TCTACCGCATCAGGGCCCCTGTCGTCCTATTCCGGCCTGGTCCAcccacc
gctccctccctatccgcgcactctccgcctccgccggccAGGATTTCATC
CTGAATGTGCCGAGCATGGGTGACTCAATTACCGAGGGTACCATCGTGAA
TTGGCagaagaaggtgggggaCTGGGTGGACGCGGACGACGTTATCGTGG
TTCTGGAGACGGACAAAGTGAGCGTCGACGTGCGGGCCCCCCGCTCTGGC
ATCATCACGGAGGTGATTGGCGCCGAAGACGATACGGTGGGCGTAGGCGT
GCCTCTGGCCAAGATTGATACGACGGCAGCCAAGCCCGAGGGGGCGGCAC
aatcctctgcccccccgcccaccccaccccctccccctcccaaagccgaa
gccgccgctgcgcctcctcctccttcttctcctccgccgccatccccccc
ttcaaccCCCCCAAAGCCCCCCACGCCTGCACCAGCCCCCGTGGCGCCGG
GAGGGGCCAGCACTGGAGGTCCCTCAGCTCCTGGCAACCGCTCAGAAACT
CGGGTAAAGATGAACCGGATGCGTCTTCGCATCGCGGAACGTCTGAAGAG
CGCGCAAAACACGGCGGCCATGCTCACCACCTTCCAGGAAGTCGACATGG
GCAATCTGATGGACATGCGGAAGGCCTACAAGGAGGAATTCGAGAAGGTG
CACGGGGTCAAGTTGGGCTTCATGTCCGCCTTCGTCAAAGCCTCTACCGC
CGCTTTGCAGGAGATCCCCGCCGTAAACGCTTTCATCGACGATGGCACCA
AGGAGATCGTCTACAGGGACTACTGCGACGTTTCCGTCGCTGTCGCTTCG
CCCGCGGGCCTGGTGGTGCCTGTGTTGCGGAATGCCGAGCGCATGAGCTT
CGCGGGGGTAGAAAGACAGATCGCCATGTACGggaagaaggccaaggagg
gtgCTTTggccctggaggacatggcggggGGGACCTTCACTATCTCAAAC
GGCGGTGTTTTCGGGAGCCTGCTCGGCACGCCCATCATTAACCCGCCCCA
GTCAGCGATCCTGGGCATGCATGCCACCAAAATGAGGgccgtggtgggga
aggacgggcaGGTGATGGCCCGGCCCATGATGTATTTAGCACTCACTTAC
GACCATCGACTGATTGATGGTCGTGAGGCCGTCACATTTTTGAAGTCGGT
CGCCGCCAAGATCGAGGACCCTCGGCGCATGGTTCTGGAGCTTTGA back to top
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