rna7033, rna7033 (mRNA) Nannochloropsis gaditana

Overview
Namerna7033
Unique Namerna7033
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length924
Alignment locationCM002470.1:289400..290412 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100191g14.7766.mrna
Orig protein idgnl|cribi|Naga_100191g14.7766
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:289400..290412 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100191g14gene6799Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7033rna7033-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM23656.1cds7016Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7033 ID=rna7033|Name=rna7033|organism=Nannochloropsis gaditana|type=mRNA|length=924bp
TCGTCTCGTGCAATGGACAGCGTGCAAGTTTGTGGAATCTTAGCAGAAGT
CATATGCTGGTCGCGTGTTGTTGACAAGGGGTGGGGGCCTTACAGTCCAC
CCCACGATGAAAACGACACTCTGCTTTCGTATCCGGACTCCCTCAGTTGT
CCCTCTATGCACTCAAGCTCCGGAATTTCACGACGCGTCGCATGTATATA
AACACACATAGAAACTACCATGTTCAAGAAACTGGTATGTCTGGCAGTGG
GCACCCTCGCTGTCGGCTCCCAGGCCTTCATGCCATCCTTGCCTATGGTC
AAAATCAGCTCCTCTGCCGCTGCCCGCGTCTATCAGCCCGCTCAATCTGA
AACCGGCCTGCGCGTACCGGTGTCAACAGATGTGATGGTTTCTGTGGGGG
ACGGCGAGAACATTGACAACGCGGTCAAGCGCTTCAAGCGCGAAGTGAAC
AAGTCGGGGCACCTCCTCGACCTGCGTTTCCACCGATACCACGAAACGAA
TCAAGAGAAAGCCAAGCGCAAGGCCGTACAGGCGCGCAGGAAGGCCCGCA
TGCTTCGCCTCTCCCTGCGCAAGGGTCAGAAGCTCTAAGGATGGGTCGAG
GGCGGGGAAAGAGTTGGATGCCGTAGATAATGCATCCGATCGAGGGTTGA
TGAAGCGATACCTTGCGCGCGCTCTAAAATGGGCGCCACGCCGGAGGGAG
AGAGGGAGAGGCTGCGTGTGCCCGAGGGCCGGCCGGGAGGGCACACCGTA
GAACTAATGCCACGCACTGGTGAAAAACAACGAGACAATCTCTCCTCTGG
CGGAGCTTCTTTTCTAAAGCCATACTGCTGCGCCTCCCCCCCTCCCATTC
CAGGCGATGTCGCCCTTCGCGTCGCTGCCTGTTTGTCACCGTGCGCGAAT
CTAATGCCCCTATTTTACTTCCTT
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protein sequence of rna7033

>rna7033-protein ID=rna7033-protein|Name=rna7033|organism=Nannochloropsis gaditana|type=polypeptide|length=142bp
MVPKHTMTSSWILDTAGHSNCDSYERSSVPYHRSFSLLYKASPSTEEYDG
VDLPLSFPLLSKSHNPFFARPYPPTCDDLAISTLPVHWGSGFGHEAWMLL
SYVQGKDCAPGGAGEIRGRHAGRGHVRHPRHGHSVADCVGVN
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mRNA from alignment at CM002470.1:289400..290412+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7033 ID=rna7033|Name=rna7033|organism=Nannochloropsis gaditana|type=mRNA|length=1013bp|location=Sequence derived from alignment at CM002470.1:289400..290412+ (Nannochloropsis gaditana)
GAACAACCGCTCTCTCAGGCCTACGCGGCTGCAGTTGTGACGGAGCGCAG
ATGGCGGAGCCCGATGACCCGAAGTCCAGGGACAACGGACGTCCTAAGAC
AGTGAAGCGATGAGGTGCATATTAAGGCGTCATGGCTCAAGCGGCGCGAC
CCGCCCACCCATATGCTCCCAATCAAACCAATAGCAGAATATCATAGGAA
AATTGAATGAAACGCAGCGAGTTTCTACATTTTGCTTCGGACTAATCACt
acaagggaggggcataAGGGGCGGAGACTCGATCAGATGGTACCGAAACA
TACAATGACTTCTTCGTGGATCCTGGACACTGCAGGGCATAGCAATTGCG
ATTCCTATGAACGCTCTTCGGTCCCTTATCACCGGTCATTCTCTCTCCTA
TATAAGGCTTCTCCGTCCACCGAGGAATATGATGGCGTCgaccttcccct
ctcatttcccctcctgtccaaGTCGCACAACCCCTTTTTCGCTCGTCCTT
ACCCTCCTACTTGCGATGACCTTGCAATCTCTACTTTACCTGTCCACTGG
GGCTCTGGATTCGGTCATGAAGCATGGATGCTGCTCTCTTATGTCCAAGG
CAAGGACTGTgcgcctggaggcgctggcgaGATCAGAGGGCGGCATGCGG
GACGGGGCCATGTGCGGCACCCACGGCATGGTCACAGCGTCGCAGACTGC
GTGGGTGTGAACTGAGAATTTACACTGCGGTAAAAGGTGGTGTACAGATC
GGAGGCAACTTTCTTGTTGTCAGCGACACTTaggggggatgaggacgtgA
GCGAGAGCAGTGTGCAGAAAGTACGCAAAAAGAAGCAAGCGGCTGGGGAC
tggaaggtgggaaagagtTTTAAAAAACAGCACGTAGGTTTACGGAAAGT
GTCTAGCGATTTTTCCGTCACGTCATATCATGTCATGTGgtgcatttttt
tttcatcttccAGTCGCATCGAGACTGGAAAAGATCTCATTCTAAACATT
CTCACATTCGGCA
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Coding sequence (CDS) from alignment at CM002470.1:289400..290412+

>rna7033 ID=rna7033|Name=rna7033|organism=Nannochloropsis gaditana|type=CDS|length=429bp|location=Sequence derived from alignment at CM002470.1:289400..290412+ (Nannochloropsis gaditana)
ATGGTACCGAAACATACAATGACTTCTTCGTGGATCCTGGACACTGCAGG
GCATAGCAATTGCGATTCCTATGAACGCTCTTCGGTCCCTTATCACCGGT
CATTCTCTCTCCTATATAAGGCTTCTCCGTCCACCGAGGAATATGATGGC
GTCgaccttcccctctcatttcccctcctgtccaaGTCGCACAACCCCTT
TTTCGCTCGTCCTTACCCTCCTACTTGCGATGACCTTGCAATCTCTACTT
TACCTGTCCACTGGGGCTCTGGATTCGGTCATGAAGCATGGATGCTGCTC
TCTTATGTCCAAGGCAAGGACTGTgcgcctggaggcgctggcgaGATCAG
AGGGCGGCATGCGGGACGGGGCCATGTGCGGCACCCACGGCATGGTCACA
GCGTCGCAGACTGCGTGGGTGTGAACTGA
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Synonyms
Publications