EWM23721.1, cds6953 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23721.1 vs. NCBI_GenBank
Match: gi|585104880|gb|EWM23721.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 920.998 bits (2379), Expect = 0.000e+0 Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query: 1 MVTERTAMKDLLHAATQLAPAGNEGGLREQGMSGISFPSCQSSKPKDLTASAASGKIRTSVGQSRMSDLLYEFPRETAKDTRMEDRDHGVRMNPFAQNSTTQQGWPSLSFSARTGINQEPSRGTLGVRSHQLPRSFLSSYQNYRPVQPHYPFASHPLQSQQQSRAQGAQVIGGASISFIPDGYLASGYQAAPKHPPAFAPSGSITVPSSSSSSSSSSSTSPTTSSSCTSVSPSTSFSSNSSSDAEAFSKRPDPLLPLAPPAALATISLPPSARRSEGKRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCVGRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIRRED 453
MVTERTAMKDLLHAATQLAPAGNEGGLREQGMSGISFPSCQSSKPKDLTASAASGKIRTSVGQSRMSDLLYEFPRETAKDTRMEDRDHGVRMNPFAQNSTTQQGWPSLSFSARTGINQEPSRGTLGVRSHQLPRSFLSSYQNYRPVQPHYPFASHPLQSQQQSRAQGAQVIGGASISFIPDGYLASGYQAAPKHPPAFAPSGSITVPSSSSSSSSSSSTSPTTSSSCTSVSPSTSFSSNSSSDAEAFSKRPDPLLPLAPPAALATISLPPSARRSEGKRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCVGRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIRRED
Sbjct: 1 MVTERTAMKDLLHAATQLAPAGNEGGLREQGMSGISFPSCQSSKPKDLTASAASGKIRTSVGQSRMSDLLYEFPRETAKDTRMEDRDHGVRMNPFAQNSTTQQGWPSLSFSARTGINQEPSRGTLGVRSHQLPRSFLSSYQNYRPVQPHYPFASHPLQSQQQSRAQGAQVIGGASISFIPDGYLASGYQAAPKHPPAFAPSGSITVPSSSSSSSSSSSTSPTTSSSCTSVSPSTSFSSNSSSDAEAFSKRPDPLLPLAPPAALATISLPPSARRSEGKRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCVGRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIRRED 453
BLAST of EWM23721.1 vs. NCBI_GenBank
Match: gi|585104808|gb|EWM23655.1| (pas pac sensor hybrid histidine kinase [Nannochloropsis gaditana]) HSP 1 Score: 101.293 bits (251), Expect = 2.245e-19 Identity = 60/178 (33.71%), Postives = 90/178 (50.56%), Query Frame = 0
Query: 278 KRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCV-----GRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIR 450
+RA R D S TP E+ + +K RAR YSA RERQ+ + ALR +V L VYK +V+ AP+ +LS D+Q ++L+AN + F P+ GR +WE + D+ + A V+ K V C + G K ++ + V +++R QGLIL+IR
Sbjct: 326 RRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHLVRAVPCTVWLPSGSVPKHDARGPQQ------SLKVLITLRSSAQGLILIIR 497
BLAST of EWM23721.1 vs. NCBI_GenBank
Match: gi|669141928|ref|XP_008606526.1| (hypothetical protein SDRG_02707 [Saprolegnia diclina VS20] >gi|530741810|gb|EQC40052.1| hypothetical protein SDRG_02707 [Saprolegnia diclina VS20]) HSP 1 Score: 67.781 bits (164), Expect = 1.242e-8 Identity = 46/163 (28.22%), Postives = 84/163 (51.53%), Query Frame = 0
Query: 293 KQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCV---GRSVWEVVHREDKETVMGAFASAVMEKEEVGRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIRRE 452
K ++ +ER R +S + R R+ + L+Q+V+ L +YK +VD+ P++ A+++AD K+LYA A+F+R L +PE + S +E+VH D ++ A S + + +++ ++ +KG K A+S R G G++ R E
Sbjct: 286 KADKSRERNRDHSRKSRLRKKVFVETLKQEVKQLQIYKDLVDQNPDLIALVTADHDRKMLYATASFSR-VLGYPEKKLMADTVSFFELVH-PDHVAMLKAELSKLAKFQDINSIPFQIKHAKGMYWK-----------------AALSARVGEHGVVFTSRVE 429 The following BLAST results are available for this feature:
BLAST of EWM23721.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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