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Properties
| Property Name | Value |
|---|
| Product | conserved unknown protein |
| Orig transcript id | gnl|cribi|Naga_100688g2.1213.mrna |
| Orig protein id | gnl|cribi|Naga_100688g2.1213 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002470.1 | supercontig | CM002470.1:134240..136406 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6969 ID=rna6969|Name=rna6969|organism=Nannochloropsis gaditana|type=mRNA|length=204bp
ATGTATCCTTCGACAACGTCTGTTGACACTGCGTCAATCCATATTCTCTA
CAGCCTCAAAAGGTACACCGCACGCATGCTAGAGCACATTGCTTTGCTCT
GGGCTTCTTTGAGCCTCAAACGCATGGCTCGTTGGCTTATAGCACAGAGT
CTAAGTAGTAGGAGATTTGGCTTGCAAATGTGTTCAGGAAGGCGACCTAC
TTAG back to topprotein sequence of rna6969 >rna6969-protein ID=rna6969-protein|Name=rna6969|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MVTERTAMKDLLHAATQLAPAGNEGGLREQGMSGISFPSCQSSKPKDLTA
SAASGKIRTSVGQSRMSDLLYEFPRETAKDTRMEDRDHGVRMNPFAQNST
TQQGWPSLSFSARTGINQEPSRGTLGVRSHQLPRSFLSSYQNYRPVQPHY
PFASHPLQSQQQSRAQGAQVIGGASISFIPDGYLASGYQAAPKHPPAFAP
SGSITVPSSSSSSSSSSSTSPTTSSSCTSVSPSTSFSSNSSSDAEAFSKR
PDPLLPLAPPAALATISLPPSARRSEGKRARRTDLSGYTPGEKQERRKER
ARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAK
VLYANAAFARFFLCHPESCVGRSVWEVVHREDKETVMGAFASAVMEKEEV
GRARCRLGTSKGQGSKEAGGAGREVPVAVSEVPVAVSVRRGTQGLILVIR
RED back to topmRNA from alignment at CM002470.1:134240..136406+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6969 ID=rna6969|Name=rna6969|organism=Nannochloropsis gaditana|type=mRNA|length=2167bp|location=Sequence derived from alignment at CM002470.1:134240..136406+ (Nannochloropsis gaditana)
AAAACTGTGACCAAGGATGGGTCTATCCAGACATGAGAAGGATGATTTAT
CGCATACATGCACATGTCATATCGAAGACTACCTTCAGGCCTTTTTGTCG
ACTTTGAGTTTATGGTTATAATTTCATGTCACTGCGTGAATCACGAACTC
CCTGTGTACGCAGTGTACGCTGTCAGTAAGAAGCTCACAAAACGAATTCA
AACCCCCCGCTAGACTTAACAGTGCACAATCATGGTAACAGAGAGGACAG
CTATGAAAGATTTGCTGCATGCAGCGACCCAGCTGGCTCCGgcgggaaat
gaaggaggctTACGCGAGCAGGGCATGTCTGGGATCTCATTCCCGTCGTG
CCAATCTTCGAAACCGAAAGACCTCACTGCCTCGGCCGCTTCAGGCAAGA
TAAGGACTAGCGTGGGGCAAAGCCGCATGAGCGATCTGCTCTACGAATTC
CCACGCGAGACTGCCAAGGATACGAGGATGGAAGACAGGGATCACGGTGT
TCGCATGAATCCTTTCGCACAGAATTCTACTACTCAGCAAGGTTGGCCTT
CACTGTCCTTCAGCGCGCGTACAGGAATCAATCAAGAGCCCTCCCGAGGT
ACTCTGGGCGTCAGAAGCCACCAGCTTCCCcggtccttcctttccagctA
CCAAAATTACCGTCCTGTGCAACCGCACTACCCCTTCGCTTCACATCCTC
TGCAATCACAACAGCAGAGTCGTGCACAGGGGGCTCAGGTCATTGGAGGA
GCATCCATTTCCTTCATCCCTGATGGGTACCTGGCCTCTGGATATCAGGC
TGCTCCCAAgcaccctcctgccttcgctccctctgGCTCCATAActgtgc
cttcctcctcctcctcctcctcctcctcctcctccacctcccccacgacg
tcttcctcctgcacgtccgtctccccttccacgtctttctcctccaattc
ctctTCGGACGCAGAGGCCTTTTCCAAAAGGCCTGACCCGCTcttgcccc
tcgcccccccggcggcgttggccaccatttccctcccgccgtccgCCCGG
CGCTCGGAGGGAAAACGGGCCCGTCGGACGGATTTAAGCGGGTACACGCC
TGGAGAGAAACAGGAACGTCGCAAAGAGCGCGCACGCATGTACAGTGCCC
AAGTCCGGGAACGGCAAAATGCCGAGCTGCatgccctccgccagcaggtC
CAGGCGTTGAGTGTGTACAAATTAatggtggacgaggcacCTGAGATATT
TGCCGTCCTCTCTGCGGACAGCCAGGCTAAGGTCCTGTATGCAAACGCAG
CTTTCGCGCGTTTTTTCCTCTGCCATCCCGAGAGCTGCGTGGGGAGGAGC
GTGTGGGAGGTCGTACACCGGGAGGATAAAGAGACTGTGATGGGCGCCTT
CGCCTCGGCTgtgatggagaaggaagaagtgggTCGGGCCCGCTGTCGTC
TGGGAACCTCGAAAGGACAGGGTAGCAaagaggcaggcggggcaggaagg
gaggttcCGGTGGCAGTGTCGGAGGTTCCGGTGGCAGTGTCGGTGCGTAG
AGGGACACAAGGCTTGATCCTTGTGATTCGGCGGGAAGATTGAAAGGGCG
AATTCCTGgctcggggaagagggagggaaaaaggaaaacgaGACGATCGG
GTACAATGTTAGAGCGATCTTTGCGGTCAAGGCAATGTCAAAAGGGAAGA
CCTTCACGCGcgaatgggaaaaaaaagaggagatgaTTGCACAATTGTAA
TACAGAAAAGGGCCGCCGGGGGAGGTAAGCCTAGAAAATGCCCGCAAAAA
AGGAAATGCTGCGGGTGTATGTACGGATTAAAAGTAGGAGCTAAAACCTG
ACGGATAAAGAGCTTTATTCACGTTCATTAAGGGGGGGCCATATGCAGTC
ATTGGGATTGACACGCATGTTTGAGGCTGTCAAACAACACGAAAGGTATG
GATGAGAAGGGCAGCCAGAATGTGAGATCATTGCACACGAGGCACTGTGT
AGTTGCAAGGGTGACCCGGGCTCGCGCGGGGAAGCAACAAATAGAGGGAA
ATGGGGTGAGAGAAGGGGACTTCAAAGTAGCGTGACAGAAAGCTGAGATA
CAATTGAATCTTGCACAACCCACTGGAAAAGGAACTCATTACAAGCACGA
TGATAACAAAGCTGTGA back to topCoding sequence (CDS) from alignment at CM002470.1:134240..136406+ >rna6969 ID=rna6969|Name=rna6969|organism=Nannochloropsis gaditana|type=CDS|length=1362bp|location=Sequence derived from alignment at CM002470.1:134240..136406+ (Nannochloropsis gaditana)
ATGGTAACAGAGAGGACAGCTATGAAAGATTTGCTGCATGCAGCGACCCA
GCTGGCTCCGgcgggaaatgaaggaggctTACGCGAGCAGGGCATGTCTG
GGATCTCATTCCCGTCGTGCCAATCTTCGAAACCGAAAGACCTCACTGCC
TCGGCCGCTTCAGGCAAGATAAGGACTAGCGTGGGGCAAAGCCGCATGAG
CGATCTGCTCTACGAATTCCCACGCGAGACTGCCAAGGATACGAGGATGG
AAGACAGGGATCACGGTGTTCGCATGAATCCTTTCGCACAGAATTCTACT
ACTCAGCAAGGTTGGCCTTCACTGTCCTTCAGCGCGCGTACAGGAATCAA
TCAAGAGCCCTCCCGAGGTACTCTGGGCGTCAGAAGCCACCAGCTTCCCc
ggtccttcctttccagctACCAAAATTACCGTCCTGTGCAACCGCACTAC
CCCTTCGCTTCACATCCTCTGCAATCACAACAGCAGAGTCGTGCACAGGG
GGCTCAGGTCATTGGAGGAGCATCCATTTCCTTCATCCCTGATGGGTACC
TGGCCTCTGGATATCAGGCTGCTCCCAAgcaccctcctgccttcgctccc
tctgGCTCCATAActgtgccttcctcctcctcctcctcctcctcctcctc
ctccacctcccccacgacgtcttcctcctgcacgtccgtctccccttcca
cgtctttctcctccaattcctctTCGGACGCAGAGGCCTTTTCCAAAAGG
CCTGACCCGCTcttgcccctcgcccccccggcggcgttggccaccatttc
cctcccgccgtccgCCCGGCGCTCGGAGGGAAAACGGGCCCGTCGGACGG
ATTTAAGCGGGTACACGCCTGGAGAGAAACAGGAACGTCGCAAAGAGCGC
GCACGCATGTACAGTGCCCAAGTCCGGGAACGGCAAAATGCCGAGCTGCa
tgccctccgccagcaggtCCAGGCGTTGAGTGTGTACAAATTAatggtgg
acgaggcacCTGAGATATTTGCCGTCCTCTCTGCGGACAGCCAGGCTAAG
GTCCTGTATGCAAACGCAGCTTTCGCGCGTTTTTTCCTCTGCCATCCCGA
GAGCTGCGTGGGGAGGAGCGTGTGGGAGGTCGTACACCGGGAGGATAAAG
AGACTGTGATGGGCGCCTTCGCCTCGGCTgtgatggagaaggaagaagtg
ggTCGGGCCCGCTGTCGTCTGGGAACCTCGAAAGGACAGGGTAGCAaaga
ggcaggcggggcaggaagggaggttcCGGTGGCAGTGTCGGAGGTTCCGG
TGGCAGTGTCGGTGCGTAGAGGGACACAAGGCTTGATCCTTGTGATTCGG
CGGGAAGATTGA back to top
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