|
|
Properties
| Property Name | Value |
|---|
| Product | Ferredoxin reductase-type FAD-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100732g2.4464.mrna |
| Orig protein id | gnl|cribi|Naga_100732g2.4464 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002469.1 | supercontig | CM002469.1:600645..603359 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6833 ID=rna6833|Name=rna6833|organism=Nannochloropsis gaditana|type=mRNA|length=282bp
ATGCCTGAGTTGAAGGAGGATCTGGTCACGCTCCTGGGGGACATCTCACC
CGTACCCGTGACGTACGCGGGAGGAGCGCGGTCCATCGAGGACTTAGAAC
GGGTGACTGAGCTGGGCAAGAACAAGTGCCTTGGATATATTCGGTGGTGC
GTTGAGCTACTCAGACGTGGTGGAGTGGGACAAGCGCAACGCGTACATTT
GATACCAGAAATTCATTCTGCCCTCTCGGTAATATCTGCGCGGAGACAAG
GGTGTAAGCCCGGGGGAGAATCGCGCTGGTGA back to topprotein sequence of rna6833 >rna6833-protein ID=rna6833-protein|Name=rna6833|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MTKASMLHLTFQLTHSPPLSISQIYTMRLSLTVSALLASSAVAFVPPMPS
TRQATHLASARIPDNVRKSLSADQLKTLEVAAEQASKAAAADLDPWFGEA
EADDGSFASFSSLESMTGKPAAAGGTSGAQDFLEANPYFDQSNIPLNTYK
NKEPHTGKIVSVKRIVGPKATGETCHIIIDHGGAMPYWEGQSYGVVPPGI
NPKNGKPNNVRLYSIASTRYGDDMKGQTASLCVRRATYWCPELKAEDPAK
KGICSNYLCDAKPGDSVALAGPTGKVMLIPEKTPEADLIMVATGTGIAPY
RTFVRRLFVEDTPARKAFKGLAWLFLGVANKDSLLYDDEWQEVKKAYPNN
FRVDYALSREQENKKGGKMYIQDKMEEYADEIFDRLSKGAHIYFCGLKGM
MPGIQDTLERVAQEKGIEWKDMLEGLKKNHQWHVEVY back to topmRNA from alignment at CM002469.1:600645..603359+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6833 ID=rna6833|Name=rna6833|organism=Nannochloropsis gaditana|type=mRNA|length=2715bp|location=Sequence derived from alignment at CM002469.1:600645..603359+ (Nannochloropsis gaditana)
AAGTCCGTCCTCTGGCACATATGTGTTTTTCCACGCAACGTCTTTCTCTG
AAGcaagatgaagaaagggaaggccgcGTATCTTGGCTCGCTGTCCTGca
gcctctcctttcccctcttcttaTAAGAGCATTGTACGATGCGAGCGACA
CTTTATCAGGACTGATAAATGACAAGTATGAAGATGGTTCCAGGGGAGGT
GGGTGCACTAAGATACAGAGGATAGGCGCGACATGAACCccgtcctttct
ttttccctagTTCACGCATGCTCGTAAATAACGCACACACGCGTGGCGAC
CGTGTGGATAGCCAAGACTCCCGTACAATGCTATGTTCATTCTATTCATG
TTCGTTTCGATTTGGAGATGTAGAGTGGACATCAAGCGGCCTAGCCCCGT
CCCTCGTATGGTTTGCTAGTGTGCTCTTGGCTCGGAAAGGCGCGTGGACG
CGTGCTTGGCCAGAGTTTTCGATCCTTGTTCTGTGACTTTTGACACCACG
CGGGAGGACGAGCCGTCCAAAGCATTAAATGAATGAAATCTCTAAAATGA
CAGCGAAAAACTGAAGAGAAAATGGGACGATAAGCGCCGACCCGATGTCT
AAGGAGGTTTCGAGGATACGTCGCCGTGATGACTAAGGCGTCAATGCTCC
ATCTCACTTTTCAGCTCACGCACTCCCCACCTCTATCCATCTCACAGATC
TACACCATGCGTCTGTCTCTCACCGTAAGCGCCCTGCTGGCCTCCAGCGC
GGTGGCATTCGTGCCCCCTATGCCTTCCACGCGCCAGGCGACCCATCTGG
TGAGTGCGTGCttgccctgcttccctccagTCCGAacatttccttttccc
tctctgcatCGAAAGCATGGCGCACTACCGACCATGAAGAACAATCCGTG
TCTTACCGTCTTTGTACCCCATTGGTCGTTTCTGCTTTTCATACCAGGCC
TCGGCCCGCATCCCCGATAACGTCCGTAAGTCCCTCTCGGCTGATCAGCT
CAAGACTTTGGAGGTCGCTGCCGAGCAAGCCAGCAAGGCGGCTGCTGCGG
ATTTGGACCCCTGGTTCGGGGAGGCTGAGGCGGACGATGGctcctttgcc
tctttctcctccctcgagtCCATGACAGGGAAACCCGCCGCGGCTGGCGG
CACCAGCGGTGCTCAAGATTTCTTGGAGGCGAATCCGTACTTCGACCAGA
GCAACATCCCCCTCAACACGTACAAGAACAAGGAGCCGCACACGGGGAAG
ATCGTGAGCGTGAAGCGCATTGTGGGCCCCAAGGCCACGGGGGAGACCTG
CCACATCATCATCGACCACGGAGGAGCCATGCCGTACTGGGAGGGGCAAT
CCTACGGTGTGGTCCCCCCCGGCATCAACCCCAAGAACGGGAAGCCGAAC
AATGTGCGTTTGTACTCGATCGCTTCCACCCGCTACGGTGATGACATGAA
GGGGCAAACCGCTTCCCTTTGCGTCCGCCGCGCCACCTACTGGTGCCCCG
AATTGAAGGCTGAGGACCCAGCGAAGAAGGGTATTTGCTCCAACTACCTC
TGCGATGCCAAGCCGGGGGACAGCGTGGCCTTGGCTGGGCCCACGGGGAA
AGTGATGCTCATCCCGGAGAAGACGCCCGAGGCGGATTTGATCATGGTGG
CAACGGGCACGGGTATCGCCCCGTACCGTACCTTCGTCCGCCGCTTGTTT
GTGGAGGATACGCCCGCCCGCAAGGCGTTCAAGGGTCTGGCCTGGTTGTT
CCTGGGCGTGGCGAACAAGGACTCGTTGCTCTACGACGACGAGTGGCAAG
AGGTGAAGAAGGCGTACCCGAACAACTTCCGCGTCGACTACGCCCTCTCC
CGTGAGCAGGAGAACaagaagggtgggaagatgTACATTCAGGACAAGAT
GGAGGAGTACGCGGACGAGATCTTCGACCGGCTTTCCAAGGGCGCGCACA
TTTACTTCTGCGGTCTCAAGGGGATGATGCCCGGCATTCAGGACACCTTA
GAGCGCGTCGCCCAGGAGAAAGGCATTGAGTGGAAGGACATGTTGGAAGG
GCTCAAGAAGAACCACCAGTGGCACGTGGAGGTGTACTAAGCATCGAGTG
GGTTCCGCctgagaggaagaggtgggcgaggTTCCGGAGCACGGGCTCTA
CTGTCAGAGGAATGTGGtgtcgtcctctttcccccctcgggcGAGGCTTG
GACGGAGGTTGTGGTAGGGTTGAGGAGAGACCGATTTTCTGCGCCTATAG
AGCGAAGGACATTATACTTGTGGAGTGAATGTAATGTTCGGAAGATCATT
ATAATCGTGTTTGTGTCTTGATGTTgacaaggtgggggaggggtgagAAA
GCAGGTacaaaagggaaggacgcatGAGGGGGATGATGGAACAGGGTAAC
TTTGACCATGTCTTCCATGGCAGTAGGTAGGTTTCCGGGTTTGTGCCTGT
GCAGAGAATGGAACGGATTTGTGGCTAAGGGGCAAGGTTCCTGGTTATAT
CAAACCAACGAAATGGAGAGTGACGTAGAGAGAGCCATCCCACCATACGC
TCCAAACTGGTGGCATGAACGGAAAAGAAATCATAACAGGTTGAAGGCAG
AAATATGAGTGTATCTAGCGTGTAGAATATAATACACTTCTAGATTACTT
CCCTCTGTTGCATGACCTTTGCGCGCGTCAGAAGTTCGCACAAACACCTA
ATATCGCCCTCGGTG back to topCoding sequence (CDS) from alignment at CM002469.1:600645..603359+ >rna6833 ID=rna6833|Name=rna6833|organism=Nannochloropsis gaditana|type=CDS|length=2628bp|location=Sequence derived from alignment at CM002469.1:600645..603359+ (Nannochloropsis gaditana)
ATGACTAAGGCGTCAATGCTCCATCTCACTTTTCAGCTCACGCACTCCCC
ACCTCTATCCATCTCACAGATCTACACCATGCGTCTGTCTCTCACCGTAA
GCGCCCTGCTGGCCTCCAGCGCGGTGGCATTCGTGCCCCCTATGCCTTCC
ACGCGCCAGGCGACCCATCTGGCCTCGGCCCGCATCCCCGATAACGTCCG
TAAGTCCCTCTCGGCTGATCAGCTCAAGACTTTGGAGGTCGCTGCCGAGC
AAGCCAGCAAGGCGGCTGCTGCGGATTTGGACCCCTGGTTCGGGGAGGCT
GAGGCGGACGATGGctcctttgcctctttctcctccctcgagtCCATGAC
AGGGAAACCCGCCGCGGCTGGCGGCACCAGCGGTGCTCAAGATTTCTTGG
AGGCGAATCCGTACTTCGACCAGAGCAACATCCCCCTCAACACGTACAAG
AACAAGGAGCCGCACACGGGGAAGATCGTGAGCGTGAAGCGCATTGTGGG
CCCCAAGGCCACGGGGGAGACCTGCCACATCATCATCGACCACGGAGGAG
CCATGCCGTACTGGGAGGGGCAATCCTACGGTGTGGTCCCCCCCGGCATC
AACCCCAAGAACGGGAAGCCGAACAATGTGCGTTTGTACTCGATCGCTTC
CACCCGCTACGGTGATGACATGAAGGGGCAAACCGCTTCCCTTTGCGTCC
GCCGCGCCACCTACTGGTGCCCCGAATTGAAGGCTGAGGACCCAGCGAAG
AAGGGTATTTGCTCCAACTACCTCTGCGATGCCAAGCCGGGGGACAGCGT
GGCCTTGGCTGGGCCCACGGGGAAAGTGATGCTCATCCCGGAGAAGACGC
CCGAGGCGGATTTGATCATGGTGGCAACGGGCACGGGTATCGCCCCGTAC
CGTACCTTCGTCCGCCGCTTGTTTGTGGAGGATACGCCCGCCCGCAAGGC
GTTCAAGGGTCTGGCCTGGTTGTTCCTGGGCGTGGCGAACAAGGACTCGT
TGCTCTACGACGACGAGTGGCAAGAGGTGAAGAAGGCGTACCCGAACAAC
TTCCGCGTCGACTACGCCCTCTCCCGTGAGCAGGAGAACaagaagggtgg
gaagatgTACATTCAGGACAAGATGGAGGAGTACGCGGACGAGATCTTCG
ACCGGCTTTCCAAGGGCGCGCACATTTACTTCTGCGGTCTCAAGGGGATG
ATGCCCGGCATTCAGGACACCTTAGAGCGCGTCGCCCAGGAGAAAGGCAT
TGAGTGGAAGGACATGTTGGAAGGGCTCAAGAAGAACCACCAGTGGCACG
TGGAGGTGTACTAAATGACTAAGGCGTCAATGCTCCATCTCACTTTTCAG
CTCACGCACTCCCCACCTCTATCCATCTCACAGATCTACACCATGCGTCT
GTCTCTCACCGTAAGCGCCCTGCTGGCCTCCAGCGCGGTGGCATTCGTGC
CCCCTATGCCTTCCACGCGCCAGGCGACCCATCTGGCCTCGGCCCGCATC
CCCGATAACGTCCGTAAGTCCCTCTCGGCTGATCAGCTCAAGACTTTGGA
GGTCGCTGCCGAGCAAGCCAGCAAGGCGGCTGCTGCGGATTTGGACCCCT
GGTTCGGGGAGGCTGAGGCGGACGATGGctcctttgcctctttctcctcc
ctcgagtCCATGACAGGGAAACCCGCCGCGGCTGGCGGCACCAGCGGTGC
TCAAGATTTCTTGGAGGCGAATCCGTACTTCGACCAGAGCAACATCCCCC
TCAACACGTACAAGAACAAGGAGCCGCACACGGGGAAGATCGTGAGCGTG
AAGCGCATTGTGGGCCCCAAGGCCACGGGGGAGACCTGCCACATCATCAT
CGACCACGGAGGAGCCATGCCGTACTGGGAGGGGCAATCCTACGGTGTGG
TCCCCCCCGGCATCAACCCCAAGAACGGGAAGCCGAACAATGTGCGTTTG
TACTCGATCGCTTCCACCCGCTACGGTGATGACATGAAGGGGCAAACCGC
TTCCCTTTGCGTCCGCCGCGCCACCTACTGGTGCCCCGAATTGAAGGCTG
AGGACCCAGCGAAGAAGGGTATTTGCTCCAACTACCTCTGCGATGCCAAG
CCGGGGGACAGCGTGGCCTTGGCTGGGCCCACGGGGAAAGTGATGCTCAT
CCCGGAGAAGACGCCCGAGGCGGATTTGATCATGGTGGCAACGGGCACGG
GTATCGCCCCGTACCGTACCTTCGTCCGCCGCTTGTTTGTGGAGGATACG
CCCGCCCGCAAGGCGTTCAAGGGTCTGGCCTGGTTGTTCCTGGGCGTGGC
GAACAAGGACTCGTTGCTCTACGACGACGAGTGGCAAGAGGTGAAGAAGG
CGTACCCGAACAACTTCCGCGTCGACTACGCCCTCTCCCGTGAGCAGGAG
AACaagaagggtgggaagatgTACATTCAGGACAAGATGGAGGAGTACGC
GGACGAGATCTTCGACCGGCTTTCCAAGGGCGCGCACATTTACTTCTGCG
GTCTCAAGGGGATGATGCCCGGCATTCAGGACACCTTAGAGCGCGTCGCC
CAGGAGAAAGGCATTGAGTGGAAGGACATGTTGGAAGGGCTCAAGAAGAA
CCACCAGTGGCACGTGGAGGTGTACTAA back to top
|