Naga_100027g56, gene6523 (gene) Nannochloropsis gaditana

Overview
NameNaga_100027g56
Unique Namegene6523
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:403398..408372 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100027g56
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:403398..408372 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL035ngnoL035Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G02470NO16G02470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6747rna6747-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6747rna6747Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6747

>rna6747-protein ID=rna6747-protein|Name=rna6747|organism=Nannochloropsis gaditana|type=polypeptide|length=1317bp
MDEEIRALQSARQGLEKGMNGDALEAEEERAPLNKIAFDQDLYTRDRFQG
FSTELVEEDEDGGNGNSAGAKRESSGDVGSAREGMHPSTKEAYRQRGRDL
ETLGEDGSDRELLRSLRESEGSGRLDTVIAHRESDYHKRARAVRQLSPSR
GDMLSDQTPMRSYGKVLEQQQLANEREELLRRIEKQKKDAEDKAQAESLA
AEAKALEMAAAVDKEEGAGAVKKRKRWDANGGQEKDGSGTSAGDWDLSDA
TPAMIISDATPGVGGRNRWDVETPMRGSAADATPTPGGSGRRNRWGETPK
TVDASDATPGPSGMSGVTPTPSGRTKKNRWDQTPLTQSGQVAVGTTPLIG
ATPLVGATPVGSALAQFGQTPAPGAAGGLYGPASSSVTPEQEQRLKWERE
LEERNRFQTDEEIEAIFKLVPGFKVLEPPTNYQPDRTGRGVFATPTPMTA
GGGFQIQSTPAREEYGIPATPSEGNLPFIAPEDEKYFKDLLEAVDEEALP
ASELKKRRIMRLLLKIKKGTPPQRKTALRQITDKAREFGAEALFDQILPL
LMSPTLEDQERHLLVKVIDRVLYKLDDLIRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMIATMRPDIDNLDEYVRNTTARAFAVVASA
LGIPSLLPFLKAVCLSKKSWQARHTGIKIIQQVAILMGCAVLPHLRQMVE
IIEHGLVDENQKVRTITALALAALAEAAFPYGIESFDSVLRPLWKGIRQH
RGKGLAAFLKAIGFIIPLMDANYANYYTKEVMVILIREFTSPDEEMKKIV
LKVVKQCVATEGVPVPYVKEDVLPPFFQNFWTQRLAMDRRNYRQVVETTV
ELANKVGAAEIVGRIVDDLKDTKEDYRRMVMETIEKVVTNLGAADVDPRL
EERLLDGLLYAFQEQVNEETSVMLNGFGTVINALGTRCKPYLQQIAFTIK
FRLNNKNAKVRMQAADLIGRIAVVMKQCGEDQIMGHLGQVLFEYLGEEYP
EVLGSILGALKAIVNVIGMNKMTPPIKELLPRLTPILKNRHEKVQENCID
LVGRIADRGAEHVPSKEWMRICFELLEMLKAHKKAIRRAAVNTFGYIAKA
VGPSEVLHTLLRNLRVQERQNRVCTTVAIAIVAETCNPFTVLPALMNEYR
VPELNVQNGVLKALSFMFEYIGEMAKDYIYAVVPLLEDALMDRDLVHRQT
AATTVKHLALGCAGLGCEDALVHLLNLVWPNIFEVSPHVINAVFEAIGGL
VVALGPTKVFHYVLQGLYHPARKVREVYWKIYNTLYIFGTDALTPAYPRI
EDEGIHTFRRTTLEIFI
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Synonyms
Publications