EWM23970.1, cds6691 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|585105256|gb|EWM23970.1| (glutathione peroxidase [Nannochloropsis gaditana]) HSP 1 Score: 410.994 bits (1055), Expect = 3.741e-145 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 1 MLSGLFSSKPTCLAFKVLFLTSLASSSAFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKEL 201 MLSGLFSSKPTCLAFKVLFLTSLASSSAFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKEL Sbjct: 1 MLSGLFSSKPTCLAFKVLFLTSLASSSAFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKEL 201
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|568015051|gb|ETL89228.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|568045352|gb|ETM42508.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570323251|gb|ETO71199.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|970633382|gb|KUF79065.1| Glutathione peroxidase [Phytophthora nicotianae]) HSP 1 Score: 174.096 bits (440), Expect = 1.529e-51 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 0 Query: 34 TLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALR 194 + DF++ D G+ S+ + PV+L+VNVAS CGYTD NYR+LQ L EKY D+G VL P N+FGGQEPG+ +ILKFTKEKY VTFP+F+K+ VNG A L+K+LK K + DI+WNFTKFL+VN P KR+ +P++ E +I+ AL Sbjct: 24 SFLDFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLKT---KLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALH 181
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|675199393|ref|XP_008908581.1| (hypothetical protein PPTG_13883 [Phytophthora parasitica INRA-310] >gi|568091255|gb|ETN06079.1| hypothetical protein PPTG_13883 [Phytophthora parasitica INRA-310] >gi|570947062|gb|ETP12319.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570979553|gb|ETP40474.1| hypothetical protein F442_12194 [Phytophthora parasitica P10297]) HSP 1 Score: 174.096 bits (440), Expect = 1.576e-51 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 0 Query: 34 TLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALR 194 + DF++ D G+ S+ + PV+L+VNVAS CGYTD NYR+LQ L EKY D+G VL P N+FGGQEPG+ +ILKFTKEKY VTFP+F+K+ VNG A L+K+LK K + DI+WNFTKFL+VN P KR+ +P++ E +I+ AL Sbjct: 25 SFLDFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLKT---KLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALH 182
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|566019694|gb|ETI42605.1| (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 173.711 bits (439), Expect = 2.262e-51 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 0 Query: 34 TLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALR 194 + DF++ D G+ S+ + PV+L+VNVAS CGYTD NYR+LQ L EKY D+G VL P N+FGGQEPG+ +ILKFTKEKY VTFP+F+K+ VNG A L+K+LK K + DI+WNFTKFL+VN P KR+ +P++ E +I+ AL Sbjct: 24 SFLDFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLKK---KLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALH 181
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|567957002|gb|ETK82611.1| (hypothetical protein L915_12002 [Phytophthora parasitica] >gi|567985662|gb|ETL36001.1| hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 173.711 bits (439), Expect = 2.332e-51 Identity = 83/161 (51.55%), Postives = 110/161 (68.32%), Query Frame = 0 Query: 34 TLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALR 194 + DF++ D G+ S+ + PV+L+VNVAS CGYTD NYR+LQ L EKY D+G VL P N+FGGQEPG+ +ILKFTKEKY VTFP+F+K+ VNG A L+K+LK K + DI+WNFTKFL+VN P KR+ +P++ E +I+ AL Sbjct: 25 SFLDFTIPDLNGRQVSMREFNAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFTVLGFPCNQFGGQEPGTAEDILKFTKEKYHVTFPLFAKVDVNGENAHPLFKFLKK---KLDGFVTNDIKWNFTKFLIVNHEPFKRYGTTTSPSEIENDIVHALH 182
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|325189753|emb|CCA24234.1| (glutathione peroxidase putative [Albugo laibachii Nc14]) HSP 1 Score: 171.014 bits (432), Expect = 1.216e-50 Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 0 Query: 28 AFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAAS 198 +A ++ YDF +KD G+ L Y+ PV L+VNVAS CGY D NY++LQ L KY D GL +LA P N+F QE S+ EIL F +++Y VTFP+F K+LVNGP A +K+L T K S + DI+WNFTKFL+V G+PVKR+ + P D + +I +AL +AA+ Sbjct: 14 VYAESQSAYDFHVKDIKGEPVHLLTYRKSPVWLVVNVASACGYADQNYKELQTLYTKYQDQGLVILAFPCNQFNSQESKSNEEILSFVQKRYGVTFPLFEKILVNGPNADPFFKFL---TKKQSGFITDDIKWNFTKFLIVQGVPVKRYGTSTRPLDIDSDIQEALANAAT 181
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|953487033|emb|CEG49095.1| (RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 169.474 bits (428), Expect = 1.085e-49 Identity = 87/185 (47.03%), Postives = 118/185 (63.78%), Query Frame = 0 Query: 17 VLFLTSLASSSAFAL-------PRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALR 194 +L L L + AF L + DFS+ + G S+ + PV+L+VNVAS+CGYTD NYR+LQ L EKY D+G VL P N+FGGQEPG+ +ILKFT+EKY VTFP+FSK+ VNG A L+ +LK + + DI+WNFTKFL+VN P R+ + +P + E +I+QAL+ Sbjct: 1 MLSLVVLLVTIAFGLLDGSKSEETSFLDFSVPNLQGHEVSMREFHAFPVILVVNVASQCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTADDILKFTQEKYHVTFPLFSKVDVNGENAHPLFTYLKKQL---DGYITNDIKWNFTKFLIVNHEPFMRYGTSTSPLEIESDIIQALQ 182
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|1173943815|gb|OQR92622.1| (glutathione peroxidase [Achlya hypogyna]) HSP 1 Score: 164.851 bits (416), Expect = 3.115e-48 Identity = 83/191 (43.46%), Postives = 121/191 (63.35%), Query Frame = 0 Query: 12 CLAFKVL-FLTSLASSSAFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKEL 201 C+ VL +T++ SS++F +DF +K SLS Y +L+VNVAS CG+TDSNYR+LQ L KY D GL++L P N+FG QEPGS A+I+ +T+ Y VTFP+F K+ VNG A+ ++K+L T + S + DI+WNFTKFL+ +G P R+A +P++ E I++ L + +EL Sbjct: 3 CVVVCVLSMVTAVVSSTSF------FDFVVKGEDNVDVSLSTYAHNKAILVVNVASACGFTDSNYRELQSLYTKYHDQGLEILGFPCNQFGAQEPGSYADIVAYTQRNYDVTFPIFQKVDVNGDNAAPVFKYL---TEALTGSFTNDIKWNFTKFLIAHGRPYARYATTTSPSELESTIVRILTTNSHEEL 184
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|1173955513|gb|OQS02466.1| (glutathione peroxidase [Thraustotheca clavata]) HSP 1 Score: 162.54 bits (410), Expect = 2.335e-47 Identity = 81/182 (44.51%), Postives = 115/182 (63.19%), Query Frame = 0 Query: 20 LTSLASSSAFALPRTLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAASKEL 201 + ++A + + ++ DF +K + LS+Y +L+VNVAS CG+T+SNY++LQ L KY + GL++LA P N+FGGQEPGS EIL FT +KY VTFP+F K+ VNG A L+K+LKAE + + + DI+WNFTKFL+ G P KR+A +P E I+ L +EL Sbjct: 1 MLAMAMTMKMVMAKSFLDFVVKGQDNEDVPLSLYSKSKAILVVNVASACGFTNSNYKELQTLYNKYHEKGLEILAFPCNQFGGQEPGSYEEILAFT-QKYEVTFPIFQKIDVNGDNADPLFKYLKAEL---TGTITNDIKWNFTKFLIAYGNPYKRYATTTSPLGIEKAIVHILDSQNHEEL 178
BLAST of EWM23970.1 vs. NCBI_GenBank
Match: gi|673029522|ref|XP_008868722.1| (hypothetical protein H310_05709 [Aphanomyces invadans] >gi|574475117|gb|ETW02117.1| hypothetical protein H310_05709 [Aphanomyces invadans]) HSP 1 Score: 162.925 bits (411), Expect = 3.389e-47 Identity = 79/164 (48.17%), Postives = 104/164 (63.41%), Query Frame = 0 Query: 34 TLYDFSLKDGTGKTQSLSVYKDKPVVLIVNVASRCGYTDSNYRQLQVLQEKYGDDGLQVLAMPSNEFGGQEPGSDAEILKFTKEKYAVTFPVFSKLLVNGPQASDLYKWLKAETPKDSSSSSADIRWNFTKFLLVNGLPVKRFAHNQAPNDFEGEILQALRDAA 197 ++YDF+LK G+ LS Y PV+L+VNVAS CG+TD NYR LQ ++Y G +++A+PSN+FG QEPG+ +I++F K Y V F +F K+ VNGP A LY WLKA P D D+ WNF KFL+V+G P R AHN + E +IL AL A Sbjct: 21 SIYDFTLKTANGEDYPLSNYDHTPVILVVNVASECGFTDINYRALQKYYDEYHQFGFEIVAVPSNQFGAQEPGTYDDIVQFAKTNYNVGFRIFDKVDVNGPNAHPLYTWLKANVPDDDGR---DVAWNFEKFLVVDGKPWNRVAHNVNLDKVEDKILYALAHEA 181 The following BLAST results are available for this feature:
BLAST of EWM23970.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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