Naga_100063g16, gene6406 (gene) Nannochloropsis gaditana

Overview
NameNaga_100063g16
Unique Namegene6406
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:115265..120989 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100063g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:115265..120989 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL031ngnoL031Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00610NO16G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6628rna6628-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6628rna6628Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6628

>rna6628-protein ID=rna6628-protein|Name=rna6628|organism=Nannochloropsis gaditana|type=polypeptide|length=1629bp
MTSQGPPSPSGKSEVVPPALTVSPSKISTPASVGGGTVFSRFIGKMELKS
PAFEFARVGPKQHSGGRRNIVSMAGQHLIEVEGTAASPPLLKAWGIHQSG
SIIRNKNRGKKGHEKLLGMTESGERVYEMEDEIGLSAKVQWTVDKPKSYC
ISPSRTPESDQVPFKSGKLQQPSNDERKKHLLDLSAIDECRDAWSTRECP
NRLTAEEESEAGISNDDDDEEEEEEEEEAAAAGEQKAKLEKHKVVFPWQT
ESENARGSHKESQTFKLSFGSGTAGLIMASTKAGKGAFLESFKRLETRQG
HLPTAAELCGQLRVGDVITQINTTDVRFSSVTTVQELLDNGERPVTVVFR
RYPQSYSFQEVAQDSRKVPFYFQYLLTEVTDPRHEQAKVMLLIESEQYAS
QYKNMTAVDRALEGQRIFDKFFDTRSHFDLSADIPSQLLKKLRAQCYPPP
PATRSVPVNPLLRPPRSSGPITLPDVGQDEDECTLRACSSDMFNDVRHHI
QEDLDRGSFPRFRESLVHYRMVGYLSQSPEYVPLHPLEVLQNDDMLQFFM
LYLMQARKHASLRCYLDMERFVKPRVAAVEDLLRRGLVASEKAKQAVKTL
MQAVLRVFSLYLCNGSYMEVTLRPLSRLNQWLRSVLNSRADIARIQRRAC
KLAASKAAETEILGSQLLKEAHRRRPGALFTFPLVNEQWQQQQAPAARPE
VESPADWLMVFDTEFSPNMAIKVRTTKQIPVSTYAKSLAHKSSASGNISA
LRPGAPSALPAGLETFLVPEEFPTKLGTVPPDPVLFNFLVPGKNEKAFYG
ACLIMYRPANEALPVDEDDLDLSLSPVKQNISSPLINVDLTISQSLGGKE
KEAQVPSTAPQASGMTCPNGVPTHESDAPLPFPSHVTTSEDSSISSSEQS
TTLSSLDPVQNSDPENSRRGSQADPPRARRGTFVAYRIERGDEAQEQVKA
MADSIFSSPRHDEDGVEPIDGREGDRDDDVSDVSAHVVVPKGPVKEQAEG
EVAREAFCRPDAPEKSSPSSQSISHLPAPECMGHRLLSMDVHIPEERTAE
AQSLWGPGEGSSSEPEPQMKHNEDGIQAQTLQEADVDDDDDSLIALVEAD
FQDALLQSYETFARASSVDQESLPTIVDSPQQWNKLDPAALGGQSPSYHQ
TYMSSLATNSTRRASAMDEIGSHVQGGQRLRRGSTNASIGTRDGLMAATA
KALPVTLTYAPYGFCLMSRFSFINSLRTPLTALFDPKQTRNRSALRVIQT
LLADHPPVRIPLDAADRDESLFLPFSTPLPSSPHELASGLSPSGLLSPAL
TQPGSASASTNGHGPTSATAHQHQLPTQIDFEIDLLFQCLSSRNLILVFL
ALLLECKVLLISERLTLLTVAGEGLRLLLHPLKWCHVYVPLVPEVMIDHV
IGCPTPFLMGLHRKTFLLRRNDFPMEIMRVDLDNDYVEVPAKDLNRKNVP
FAGPLARKFERMASPAMAYSDSYRWPATTQLHAKTTTGMLTTTNFSTTGM
VSPPASAGNENMSALPSHSPQKRDVRAALHVLREFVQGLLMGIEDSCYRL
CTETELTILFDETLFGHINGPAELLLITPNDPETDALPHSPHLPVAPAQT
GAATESFILRFSRTQAFSNVLMKSLQRTV
back to top
Synonyms
Publications