|
Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_101802g2.9667.mrna |
Orig protein id | gnl|cribi|Naga_101802g2.9667 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002469.1 | supercontig | CM002469.1:15422..15774 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6590 ID=rna6590|Name=rna6590|organism=Nannochloropsis gaditana|type=mRNA|length=2901bp CCACTTTGATTTTCCAAGTGCGATCATCCCCTCCCCACGGGTTCCGCCCC AGCTTCCTCTCGCGCAGCCCATGAGTAAGGCTCGATTCTTGTTGTGGAAG GGGTTCAAAATCCGTTATCTTTTGCTGTTGGATGCTCGAAAACACACGGA GTCATTCATAACTTTATGAATTCTGACGAGGAAACTCTTTTTTTCATTGT GACATCTCAACGATGGGCCAAGATTTAATTCAGGTTCACTCAGAAACACC TGTACTGTGTCGTGTATGGGCCCCTAACAGGTATCATGGCGTGGAAAGGT ATAACAAGACATTTACTCACTTTTGCCGTGATCATGGTCGCGTTTGTTAC CACGGTATCGGAAGAATCTTGCCCTTTTGTAAGGGTCAGGTCAACAAGGC GAATACGGAAAGATTCGGTTGTCTTTCGCGTGCGACTGAAAATCGCCAAA ATGGATAGGAATGTCATTAAAGCACCTACAAATATGGTTTTGAAGATAAC AAGTCCACCATCCTTACGATTTTCCTCTTTTCGAGTCGACAAGAAAAGAA ATCGCCCTGTGACGCTCAAGCGGAGTGACGAAGAGATTTACCTTTTCAAT GTGCTAGATCATCGCGTCTCGCGACGTCGAATACTATTCCAGGTATTTTA GGAATGGAATGCTATTGTCAATGTATCCGATAAGTATTATGAGCAAATAT CTAATAGGCGAACTTCTACTCCTAGTTTAAAGGGAGTAGTCGAACTCTTC CTCGCTTCGGCACCGCCACATACCTTAGCAACGGAAATATCACAGCATGT TACAGACCATATATTATCATAGAGCACGACGACACAACAAATACTAGCGA CTGGAGTCCAGATGGGTACTCACTTTACGCCAAATTTCAGCAGCCGTTGG AGGAAGGACGCCCTTCGCCCGTCTTACGCAGACTTCATGCTCCAAACTCG ACAGACATTGCTCGTGACTGTTACGAGTATTGCTCCTTCACGACAGAAGA GCCTGTACCATTCTATTTCCAATGGGCAGAGGTGTCAAAGAGTTGTTCCT GTTTTGGATCCCATGTAACACTTGTCTGGGAATCTACTTCATCCGTGTAC CGCGTAATCCGGAAAGCAAAGCTTGGAAGCTTGTCACAGGAGCAACAGCT TATTGCGGATGTATGGAAACTTGTGGACGGGATGTTCTTCGACAGAACCT TTAATGGACAGCCTTGGCTCACCGTGTTACAGAATTCTATCAGAAAAGAT TATGCTTCGATGGAGGAGGCTTACAACGCTACGAGGGCTATGCTAGATTT GCTTCAGGATAATTACACAAGATTCCTTTCACCGAGTGAATACATGGAGT TTCAAGTCGATACACTTGAGAAAGAATTTGCAGGTGTCGGTGTCCGCATG CAAAATGCCACTATCGAAATAGTCTTAGAAGGACCAGCCAAAAAGGGTGG CGTGAAGCCTGGTGACATAGTACTGTCTGTAGATGGTCAATCAACCGAGA ATTTGACAACAGAAGTCATCGTACAGCTGCTTAGGGGGCCTCCAGAGACA AACGTCTGTATGGATATTCTCTCAGTCGCCAATGGAGTCATCCAAGAACT TTGTCTAGTTAGACAGTCTGTTGAAAATCCTTCTGTATCCGCTTCCGTGG AGGAATTTGGTGGTGATAAGTATGGTATCTTGAAAGTTGACAGGTTCAGT ACAACTACCGCCGATCTTATCGAACGAGCGCTTAAAACATTCTATGAAAA CATCCGATTCATAGTATTAGATCTCAGAGGTAATGCAGGTGGACTACTTG ATAGTGCTAAAAATGTGAGCAGCTTGTTTTTGCCGAAGTCCACGATAATT TATTCCGAAATTGATCCCTTCACGTCAAAAATCGTCCGAAGCGATGCCGA CGGTATAGAGATATCTATACCTATCTTAATTTTGGTCAACAAGCAATCCG CTTCAGCTTCAGAGATCGTTTCGGCAGCACTACGCGAAAATAAGCGAGCA AAAATCGTGGGAGAACGCACTTTTGGCAAGGGGGTCGCGCAATCTGTAGA AGAAGTGACCAATGGTAGTGCAGTCAAAATTACGACATCAAAATGGCTTA CACCGCTTGGAAATGATGTCAACAACGAAGGAATTGACGTAGACATTCCC AGCACGTGCAGCGAGAGTGATTCAGTCCTTGTCTGCTTGAAGGATTACCT GGAATCTCTCAATGAATAATGCAATCTGGCATTCAAAAAGCGACGTGGAA TTTCAGATTTGATGAGGATTTAAGAACCACTCGTATAAGAACCACTCGTA CAGTGGATAGGCATGAAGTAATGGGAGATTTCCGGCGTCGATAAGTCCAC TGCCAGGCAAAAATGCGGGAAACATATCACTTCTTAGACGTAAGAGCCAA GTCACTTGTGAAGTAGATGCAACGGATCGACAGCACAAATTTTGGCTGCA GAGAATTTACCAAGATCCTCAATTACGAATAAACGAAACAGATGGATATA TCGTTCTCAAATATGAATCGGAGTGACAGTTAGGGGTTCATCTCGTGACT GACTTCTCATCTCTTCCCTTTGACGCGATTACATGAATGACATGATGATA TGGGAACAAGGGATCAGCGATAGGAGGTTAAGGGAGCCGTCATGGGCCCT ACATTATGTCCGTTATGGGCCCTACAGCCTCCACTACGATGTGCTGATCA CAAGTGTGTCGTGTCATGGTTTGCGTCCACCTAATCATTTTGTATGATAT ATTATTATACGACAACAGAACTGGCGTCGACCAGTGTCTTTCTTCTCTGG TTGTCTATCGTGTTGGTTATCTTAGTACACGATTCTTTGGTGAATCATTT GGTCTGTACTCTCAGGGAGAATAGTAATTGTACTGAAGAATTAATTGCGT C back to topprotein sequence of rna6590 >rna6590-protein ID=rna6590-protein|Name=rna6590|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp MICGRVGESGFCAIASGRDVISKSQMHPVRDALTGSQANMLDGRYEFETG ARNGRSQNFEIHVQPFPFPFPLPQVP back to topmRNA from alignment at CM002469.1:15422..15774+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6590 ID=rna6590|Name=rna6590|organism=Nannochloropsis gaditana|type=mRNA|length=353bp|location=Sequence derived from alignment at CM002469.1:15422..15774+ (Nannochloropsis gaditana) GTCAACGGATGTCAGGGGCGGatcgaaagagggagggagggagggaggga
tggatagagggagggacggagggaggggccgatgCACCTCAAACTTgaat
tgagggaggggagagagaggagatgatttgtgggagggtgggagagagtg
GATTTTGTGCGATTGCTTCTGGGAGAGATGTCATTTCAAAGTCACAAATG
CATCCGGTGCGAGATGCTCTTACAGGGTCACAGGCAAACATGCTCGATGG
GCGATACGAATTTGAAACGGGCGCGAGAAACGGTCGCagtcaaaattttg
aaatcCATGTTcaaccctttcctttcccattccccctcccgcaaGTGCCT
TGA back to topCoding sequence (CDS) from alignment at CM002469.1:15422..15774+ >rna6590 ID=rna6590|Name=rna6590|organism=Nannochloropsis gaditana|type=CDS|length=231bp|location=Sequence derived from alignment at CM002469.1:15422..15774+ (Nannochloropsis gaditana) atgatttgtgggagggtgggagagagtgGATTTTGTGCGATTGCTTCTGG GAGAGATGTCATTTCAAAGTCACAAATGCATCCGGTGCGAGATGCTCTTA CAGGGTCACAGGCAAACATGCTCGATGGGCGATACGAATTTGAAACGGGC GCGAGAAACGGTCGCagtcaaaattttgaaatcCATGTTcaaccctttcc tttcccattccccctcccgcaaGTGCCTTGA back to top
|