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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101442g2.10239.mrna |
| Orig protein id | gnl|cribi|Naga_101442g2.10239 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:806478..808014 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6564 ID=rna6564|Name=rna6564|organism=Nannochloropsis gaditana|type=mRNA|length=1152bp
CTTGATTCTTCTTTCTTCCCTCCTTCTGTTTTTTTGTCTTCCTTTCCCTA
TTTTTCCCTTCTCCTCTCGTCTTTCCTTTGTCTCCCACGCTTCTCTCCCT
CTTCTTTCACACCCCCCTCGTCCCCACCATACACTTATCCTCCCTCTCTC
CCTCCCTCTATCAGGTGGGGTGAGGACGGATACATTCGCCTGCAACGTGG
CGTCCGTCAGGAGGGAGGTCAGTGCGGGCTACTGATGGCGGCCTCCTACC
CCCTCCGTCTAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GACGGGTGTACATACATCTTGTCAGTAGCAGGGCTGTGAAGATAGGGTAC
AAGCAGAGATACTTTAGGGCCGCTGGATATTCAAAAACGCAGGGGTTGGG
ACAGGGGGCGCGGCTGGAGGGAGAGAGGGAGGGAGGGAGAGAGGGAGGGA
GGGAGGGAGGGAGGATGGTGTGCATGGAAATTTGTCAGAAGGGGCGATCG
AGAAGGAAGCGAAGTGCAAAGAGAGCGATAGAGATGAAGAGGCAATATGT
GTTGGCCCTTGGGAAGGAAGTTAAGGAGACGGAAATCTATGATGGATCCC
TACAAGACTCTGGAGAGTGAGGAGAGAAAGGATGTGGGGAGGAGAGATGA
ACCGAGAAAATGGTGCGAAAAAGCGAGACGAGAACGAATCTATGTGAGTG
AGGCGGAGGGAATGGATTCTAAAGGGGAGGAGGGAAGAGACCGGTGATGG
GATAGGAAGGCGCGTGCCTCGCCTGTTGGTACGTGGACAACAAAAGGTTG
AAGACGAAGAGAATGAGGCAAAACATCGAAGATAGTGATGAGGACAAAAG
AAGCAGAAGGCGTGGTTGGAAATTGAAGTCCAAAATTCCCCCCCCCCCCA
AAAAAGGGGGGAAGTAATGGGAAGGTTCGGTAGAGAGGATGGGTGTTGCC
AGCCTCAATCTCAAGCATCTCCTTCCCGAATTACAGACTTAAAAGGCAAA
GAAAGAAATTCGCGTAAGACGCTTCTGAACCTTGATCTGGGACGATGAGG
GGAGGGGAGGGGCCCATCGCCGTGGGGCTCGTTACCTCCCACGGGAGTGC
GGAAGACGATCGTGGGAAAAGCGTGGAATTCTGCTGTTTCTGCTGCTTTT
CC back to topprotein sequence of rna6564 >rna6564-protein ID=rna6564-protein|Name=rna6564|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MPQGRPYHELVRSLLTNLCPLYLLARYVHVPHVGTGRTGVRSRDHEGFNR
LTSVGVSPARSASTERGHFFSGLPRLRWNRTLGQAEGPCSHRLHRKLYSR
HCRHFVFPDGRNGGSEERGEGVREGGKRAQRLEVPWISPYPHLFATYHVN
PPFLPLSLPLSLPP back to topmRNA from alignment at CM002468.1:806478..808014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6564 ID=rna6564|Name=rna6564|organism=Nannochloropsis gaditana|type=mRNA|length=1537bp|location=Sequence derived from alignment at CM002468.1:806478..808014- (Nannochloropsis gaditana)
TGGGGTAGATCCCGGGGAGGGAGGCAGTAATGACCTTCGTGTACCGATGC
AGTGACACCGCCTGCGGCCTACCGCCTCATGCATGGACGGGCCACGCTCA
TGGTTGTGGGAACGACGGGCGTTGGGCCCTTCCTCCGTGTCAATTTCGTC
TTATTCCTGGGATGGGGTAACGTGGTCTCCAGGTATTGTTCTGTAAACAC
TCTTCCCTCATTCGCAGTCCATAGGAAGGCGTGGTTGTCCGCATCGAAGG
AAAGAAAGTATTGTTGAAAGACACGTCTGTAGAACTCAAATTCCTAGATA
CGTGAGAATGGTGTTGTCTCGGTGCAGGCCAACCGTGCGGCTTTCAGCAA
GTGTCTCCACGTGGACACAATGCCAGCCTGCTTACACCAGCACGCACCTG
GTACCCACTGCAGTGGCATGTGTGAATTATATCTGATAACCAAAGGATAA
AAAGATTATATTACACCCCATGCCCGCACCTGATGCCGCAAGGAAGGCCT
TATCATGAGCTTGTGCGTTCTCTCCTGACGAACCTTTGCCCTCTCTACCT
CCTGGCTCGATATGTCCATGTTCCTCACGTGGGCACCGGCCGCACAGGTG
TCAGAAGTCGTGACCATGAAGGCTTTAACAGACTCACTTCTGTGGGAGTA
TCCCCAGCACGGTCGGCTTCGACTGAACGCGGTCATTTTTTTTCTGGCCT
TCCTCGTCTCCGCTGGAATAGGACTCTCGGCCAAGCTGAAGGTAAGCAGA
GCCGTCACAGGCATCAATGAGACAGTTTGTTGGGTGAATTGAGATGATGC
CGTCTATTTTATTCCTTGTGGCGATCGATGGCGCTTTGACCGAAAGCAAG
TCTTGGGAAGAGCAGGAAGTGCCAATGCTGTGCGGGAGTCTCGAGGAAAG
AGGGAGGGAGGGGAAGGAAGAGGAGGAAAATGAAGAGACATTCGCAAGCT
TAGTCCGCAAGGAGATCCATGCAACGCCTTGTACTGACACGGCATCTACG
AGCTCCTAGGGCCTGTGAATGCGTTGATTGTCCTTCTTTATTCATAATCC
TCACATCTGGAATCAGTCCCGCTCGAAGCACCCCGTATAGGGCGCGGAAT
GGCATCATTCACTCACCTCTTGTCTATAAATTTTCAAAGCCTCTTTATCT
GTGTCCCTTTTTTGGGTTCCTCCCTCGTCCCCTGGCCATCTCTCCCACCC
ACGCATATGCTCCTTCCCTCCCTCCCCCCCTCCCTCCTTCCCTCCCTCCC
CCCCTCCCTCCTTCCCTCCTGTCTTCCCCCCTTCCCCCCCTTTCTTCTAT
TGTAGGGCCGTGCTCGCATCGCTTACACCGCAAGCTGTATTCACGCCATT
GCAGGCACTTCGTATTTCCTGATGGTAGGAATGGAGGGAGTGAGGAGCGA
GGGGAGGGGGTGAGGGAGGGAGGGAAGAGGGCGCAAAGACTTGAAGTACC
ATGGATCTCGCCCTATCCTCACCTTTTCGCCACGTATCATGTCAATCCTC
CCTTTCTCCCTCTGTCCCTCCCTCTGTCCCTCCCTCC back to topCoding sequence (CDS) from alignment at CM002468.1:806478..808014- >rna6564 ID=rna6564|Name=rna6564|organism=Nannochloropsis gaditana|type=CDS|length=982bp|location=Sequence derived from alignment at CM002468.1:806478..808014- (Nannochloropsis gaditana)
GGCCGTGCTCGCATCGCTTACACCGCAAGCTGTATTCACGCCATTGCAGG
CACTTCGTATTTCCTGATGGTAGGAATGGAGGGAGTGAGGAGCGAGGGGA
GGGGGTGAGGGAGGGAGGGAAGAGGGCGCAAAGACTTGAAGTACCATGGA
TCTCGCCCTATCCTCACCTTTTCGCCACGTATCATGTCAATCCTCCCTTT
CTCCCTCTGTCCCTCCCTCTGTCCCTCCCTCCATGCCGCAAGGAAGGCCT
TATCATGAGCTTGTGCGTTCTCTCCTGACGAACCTTTGCCCTCTCTACCT
CCTGGCTCGATATGTCCATGTTCCTCACGTGGGCACCGGCCGCACAGGTG
TCAGAAGTCGTGACCATGAAGGCTTTAACAGACTCACTTCTGTGGGAGTA
TCCCCAGCACGGTCGGCTTCGACTGAACGCGGTCATTTTTTTTCTGGCCT
TCCTCGTCTCCGCTGGAATAGGACTCTCGGCCAAGCTGAAGGGCCGTGCT
CGCATCGCTTACACCGCAAGCTGTATTCACGCCATTGCAGGCACTTCGTA
TTTCCTGATGGTAGGAATGGAGGGAGTGAGGAGCGAGGGGAGGGGGTGAG
GGAGGGAGGGAAGAGGGCGCAAAGACTTGAAGTACCATGGATCTCGCCCT
ATCCTCACCTTTTCGCCACGTATCATGTCAATCCTCCCTTTCTCCCTCTG
TCCCTCCCTCTGTCCCTCCCTCCATGCCGCAAGGAAGGCCTTATCATGAG
CTTGTGCGTTCTCTCCTGACGAACCTTTGCCCTCTCTACCTCCTGGCTCG
ATATGTCCATGTTCCTCACGTGGGCACCGGCCGCACAGGTGTCAGAAGTC
GTGACCATGAAGGCTTTAACAGACTCACTTCTGTGGGAGTATCCCCAGCA
CGGTCGGCTTCGACTGAACGCGGTCATTTTTTTTCTGGCCTTCCTCGTCT
CCGCTGGAATAGGACTCTCGGCCAAGCTGAAG back to top
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