EWM24132.1, cds6542 (CDS) Nannochloropsis gaditana

Overview
NameEWM24132.1
Unique Namecds6542
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:793343..793420 +
Alignment locationCM002468.1:793576..793708 +
Alignment locationCM002468.1:794049..794219 +
Alignment locationCM002468.1:794533..794639 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24132.1
Productmitochondrial fission 1 protein
Orig transcript idgnl|cribi|Naga_100810g1.8469.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:793343..793420 +
CM002468.1supercontigCM002468.1:793576..793708 +
CM002468.1supercontigCM002468.1:794049..794219 +
CM002468.1supercontigCM002468.1:794533..794639 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0000266mitochondrial fission
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR016543Fis1
IPR011990TPR-like_helical_dom
IPR028061Fis1_TPR_C
Homology
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|585105486|gb|EWM24132.1| (mitochondrial fission 1 protein [Nannochloropsis gaditana])

HSP 1 Score: 333.954 bits (855), Expect = 4.494e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query:    1 MTVKEDRDIFEQKLQVEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGATAAILLGAMLGSGRRGR 162
            MTVKEDRDIFEQKLQVEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGATAAILLGAMLGSGRRGR
Sbjct:    1 MTVKEDRDIFEQKLQVEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGATAAILLGAMLGSGRRGR 162          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|298715039|emb|CBJ27746.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 88.5817 bits (218), Expect = 2.248e-19
Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    1 MTVKEDRDIFEQKLQVEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGATAAILLGAMLG 156
            M  K + ++ +Q+L+ EA  ++   P     W  E  K +P+L++KF YA  L  + S      GM LL  L  + ++V EC Y++A+ LY    + ECR +V+ +LR++PD      LH  V++A A+++  +      G   A   IL+GA+L 
Sbjct:    1 MPSKVNSELLDQQLKAEAPVAEASCPRLRDMWLQESNKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEGLAESSYHVGECYYSMALALYRMGRYEECRSMVEIVLRMDPDMPAAQTLHKAVQEAVARRNETVRNVAAGGAAVAGLGILVGALLS 156          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|673037300|ref|XP_008872611.1| (hypothetical protein H310_08580 [Aphanomyces invadans] >gi|574471407|gb|ETV98414.1| hypothetical protein H310_08580 [Aphanomyces invadans])

HSP 1 Score: 73.559 bits (179), Expect = 1.282e-13
Identity = 42/115 (36.52%), Postives = 66/115 (57.39%), Query Frame = 0
Query:   32 WEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAAR-FNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGA 145
            + AE++K  P+++VKF YA  LT      +KS G+ LL +++     N  ECL+ L+   +   +  +CR+  +RLLR++P H     LH  VKD  +K D AIG+G+  G + A
Sbjct:   21 YLAEQEKDYPNVSVKFRYAQALTRDEKAENKSRGVGLLIDMLDEHGINKIECLFTLSTTYFELGDHAKCRQHCERLLRIDPKHEKALNLHRCVKDTLSK-DSAIGIGLAAGAVVA 134          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|698825747|ref|XP_009845902.1| (hypothetical protein H257_18519 [Aphanomyces astaci] >gi|574098964|gb|ETV64610.1| hypothetical protein H257_18519 [Aphanomyces astaci])

HSP 1 Score: 72.4034 bits (176), Expect = 4.007e-13
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   32 WEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAAR-FNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIGATAAIL 150
            + AE++K  P+++VKF YA  LT      +K+ G+ LL +++     N  ECL+ L+   +   +  +CR+  +RLLR++P +     LH  VKD   K D AIG+G+  G + A   +L
Sbjct:   21 YLAEQEKDSPNVSVKFRYAQALTRDEKAENKTRGIGLLLDILDEHSINKVECLFTLSTTYFELGDHAKCRQYCERLLRIDPTNEKALNLHRCVKDTLTK-DSAIGIGLAAGAVVALGIVL 139          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|669141658|ref|XP_008606391.1| (hypothetical protein SDRG_02573 [Saprolegnia diclina VS20] >gi|530741675|gb|EQC39917.1| hypothetical protein SDRG_02573 [Saprolegnia diclina VS20])

HSP 1 Score: 69.3218 bits (168), Expect = 4.416e-12
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 0
Query:   32 WEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARF-NVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVI 143
            + AE+ K  P   VKF YA  L       +K  G+ LL++L+   + N  +CLY LA+  Y   E+ +CR+  + LLR+NP H     LH   KD    +D  IG+G+  G +
Sbjct:   18 YLAEQAKDYPSAFVKFTYAKALARDAKPENKQRGIGLLHDLLDEDYMNKTDCLYCLALAYYDLGEFSKCRKQCEVLLRINPTHEKALSLHQSAKD-HVNRDGCIGLGLAAGAV 129          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|813181058|ref|XP_012206124.1| (hypothetical protein SPRG_09980 [Saprolegnia parasitica CBS 223.65] >gi|641528974|gb|KDO23172.1| hypothetical protein SPRG_09980 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 68.9366 bits (167), Expect = 6.007e-12
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   32 WEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARF-NVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVI 143
            + AE+ K  P   VKF YA  L       +K  G+ LL +L+   + N  +CLY LA+  Y   E+ +CR+  + LLR+NP H     LH   KD    +D  IG+G+  G +
Sbjct:   18 YLAEQAKDYPSAFVKFTYAKALARDAKPENKQRGIGLLQDLLNEDYMNKTDCLYCLALAYYDLGEFSKCRKQCEVLLRINPTHEKALSLHQSAKD-HVNRDGCIGLGLAAGAV 129          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|1173955596|gb|OQS02541.1| (hypothetical protein THRCLA_21399, partial [Thraustotheca clavata])

HSP 1 Score: 67.0106 bits (162), Expect = 3.452e-11
Identity = 39/113 (34.51%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   32 WEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARF-NVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVI 143
            + AE+ K  P   VKF YA  L     E +K  G+ LL +L+   + N  +C Y  A+  +   E+++CR+  + LLR+NP H     LH   KD    +D AIG G+  G +
Sbjct:   19 YLAEQAKDYPSAFVKFTYAKALVRDGKEDNKYRGIGLLQDLLNEDYANKVDCYYFSALAYFDLAEYKKCRKQCELLLRINPTHEKAINLHQCAKD-HVNRDGAIGFGLAAGAV 130          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|1046792073|gb|OCK99795.1| (mitochondria fission 1 protein [Cenococcum geophilum 1.58])

HSP 1 Score: 58.9214 bits (141), Expect = 4.753e-8
Identity = 46/125 (36.80%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   43 LNVKFIYAYVLTMSNSERHKSMGMRLLNELIAARFNVE---ECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIG--ATAAILLGAML--GSGRR 160
            L  KF YA+ L  SN+ + +  G+RLL+E+   R + E   ECLY LA+  Y    + E R+  + LL L P +     L   + D  AK+ L     VGV ++G  A AA ++G++L  GS RR
Sbjct:   36 LQTKFNYAWGLIKSNNRQEQQEGVRLLSEIF--RNSPERRRECLYYLALGNYKLGNYAEARKYNELLLDLEPANLQAGSLQSLIDDRVAKEGL-----VGVAIVGGIAVAAGIVGSLLFKGSSRR 153          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|1183381989|gb|ORY07396.1| (hypothetical protein BCR34DRAFT_489493 [Clohesyomyces aquaticus])

HSP 1 Score: 58.5362 bits (140), Expect = 8.368e-8
Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 0
Query:   16 VEAKASKEQIPDKEAAWEAERKKAKPDLNVKFIYAYVLTMSNSERHKSMGMRLLNELI-AARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIG--ATAAILLGAMLGSGRRGR 162
            VE+    E++    A +E E +     L  KF YA+ L  S++   +  G+RLL+E+   +R    ECLY LA+  Y    + E R   + LL L P +     L   + D   K+ L     VGV ++G  A AA ++G+ML  G R R
Sbjct:   11 VESPLKPEELQVLRAQYEKEGEYV--GLQTKFNYAWGLIKSSNRSEQQEGVRLLSEIFRNSRERRRECLYYLALGNYKLGNYAEARRYNELLLELEPGNLQAGSLKGLIDDKVQKEGL-----VGVAILGGIAVAAGIVGSMLVKGSRRR 153          
BLAST of EWM24132.1 vs. NCBI_GenBank
Match: gi|154275020|ref|XP_001538361.1| (conserved hypothetical protein [Histoplasma capsulatum NAm1] >gi|150414801|gb|EDN10163.1| conserved hypothetical protein [Histoplasma capsulatum NAm1])

HSP 1 Score: 60.077 bits (144), Expect = 1.422e-7
Identity = 47/151 (31.13%), Postives = 74/151 (49.01%), Query Frame = 0
Query:   20 ASKEQIPDKEAAWEAERKKAKPD-----LNVKFIYAYVLTMSNSERHKSMGMRLLNELI-AARFNVEECLYALAVCLYSQTEWRECREVVDRLLRLNPDHRYGNELHLFVKDAQAKQDLAIGVGVGVGVIG--ATAAILLGAMLGSGRRGR 162
            A+  + P K A  +  R + + +     +  KF YA+ L  SN+ + +  G+RLL+E+  +AR    ECLY LA+  Y    + E R   D LL   P +     L   + +  AK+ L     VGV ++G  A AA ++G ++  G R R
Sbjct:    8 AADAESPLKPAELQVLRAQYEKEGEYVGVQTKFNYAWGLIKSNTRQEQQEGVRLLSEIFKSARERRRECLYYLALGNYKLGNYGEARRYNDLLLDHEPGNLQAASLRTLIDEKVAKEGL-----VGVAILGGVALAAGVVGGLIMKGARRR 153          
The following BLAST results are available for this feature:
BLAST of EWM24132.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105486|gb|EWM24132.1|4.494e-116100.00mitochondrial fission 1 protein [Nannochloropsis g... [more]
gi|298715039|emb|CBJ27746.1|2.248e-1932.05conserved unknown protein [Ectocarpus siliculosus][more]
gi|673037300|ref|XP_008872611.1|1.282e-1336.52hypothetical protein H310_08580 [Aphanomyces invad... [more]
gi|698825747|ref|XP_009845902.1|4.007e-1334.17hypothetical protein H257_18519 [Aphanomyces astac... [more]
gi|669141658|ref|XP_008606391.1|4.416e-1235.40hypothetical protein SDRG_02573 [Saprolegnia dicli... [more]
gi|813181058|ref|XP_012206124.1|6.007e-1235.40hypothetical protein SPRG_09980 [Saprolegnia paras... [more]
gi|1173955596|gb|OQS02541.1|3.452e-1134.51hypothetical protein THRCLA_21399, partial [Thraus... [more]
gi|1046792073|gb|OCK99795.1|4.753e-836.80mitochondria fission 1 protein [Cenococcum geophil... [more]
gi|1183381989|gb|ORY07396.1|8.368e-832.67hypothetical protein BCR34DRAFT_489493 [Clohesyomy... [more]
gi|154275020|ref|XP_001538361.1|1.422e-731.13conserved hypothetical protein [Histoplasma capsul... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6558rna6558Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications