EWM24183.1, cds6489 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|585105568|gb|EWM24183.1| (RNA helicase, DEAD-box type [Nannochloropsis gaditana]) HSP 1 Score: 1168.3 bits (3021), Expect = 0.000e+0 Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0 Query: 1 MEDLFRALRAGTKFKKTSQPGACAAANKHHGTRTSLSLSSPSLSTCGPPTNTNTSSPSAALDFFRSAALPDEQKKKRPRGGGGRMGEKHEEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKEGRAQGGGGMKKK 579 MEDLFRALRAGTKFKKTSQPGACAAANKHHGTRTSLSLSSPSLSTCGPPTNTNTSSPSAALDFFRSAALPDEQKKKRPRGGGGRMGEKHEEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKEGRAQGGGGMKKK Sbjct: 1 MEDLFRALRAGTKFKKTSQPGACAAANKHHGTRTSLSLSSPSLSTCGPPTNTNTSSPSAALDFFRSAALPDEQKKKRPRGGGGRMGEKHEEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKEGRAQGGGGMKKK 579
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|553193361|ref|XP_005855760.1| (putative dead box rna helicase [Nannochloropsis gaditana CCMP526] >gi|422293301|gb|EKU20601.1| putative dead box rna helicase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 571.237 bits (1471), Expect = 0.000e+0 Identity = 288/289 (99.65%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 156 MGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAV 444 MGRDLLATAPTGSGKTAAFVLPTLLRLEKAEA+LLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAV Sbjct: 1 MGRDLLATAPTGSGKTAAFVLPTLLRLEKAEARLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAV 289
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|1173955144|gb|OQS02182.1| (DEAD/DEAH box RNA helicase [Thraustotheca clavata]) HSP 1 Score: 443.351 bits (1139), Expect = 3.707e-147 Identity = 220/478 (46.03%), Postives = 319/478 (66.74%), Query Frame = 0 Query: 89 HEEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRK 566 + D+++ R+RL I G VPD + F+ + S+K LL NIESS++K PT IQMQA+P + RD+L APTGSGKTAAF +P LL LE + +G R+++LAPTRELA QI GE QRL++G+ F ++++SKA A+T + YD+++ATP+RL+ + E + L +V + LDEAD+LFE+G F+ Q+DE+ AACT P +QR +FSAT+ ++++A SVL+DPV V++G+ + A A+ ++ Q L+FVG+EEGKL+A++QL+++G+ P+L+F++NK+RA+ELYHEL YD + V +HADR+ EQR +++ R GAVWVL+CTDL +RG+D + VN+V+NYD P S V+Y+HR+GRTGR GR G AVTF+TE DM LR IANV+KLSG VP WM +KK ++ R+ + R RI T + +D++KA K Sbjct: 51 NHNDDIKHLRKRLNIAVWGTVVPDPIVEFAQMKAA-KSIKSVLLTNIESSEYKNPTAIQMQAIPAILQKRDVLGIAPTGSGKTAAFAIPMLLNLETPQQD---HGIRSIVLAPTRELAVQIHGEFQRLSSGKKFHISLLSKASASTMASHAKTCTVNYDIVIATPLRLVHLISEQSIPLDKVEMICLDEADRLFEMG-----------------FVEQIDEVFAACTNPSLQRMMFSATMLQGVEEMAQSVLKDPVKVAIGVKN-------AGAI--TINQRLMFVGKEEGKLVAMKQLIQEGLKLPVLMFVQNKDRAKELYHELVYDGINVGAIHADRTKEQRDKVIKDFRTGAVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRNGRKGEAVTFFTESDM---IYLRTIANVMKLSGCDVPDWMLAMKKASVRQ-RKQLLKAPPKRHRIETVSGYDLKKAHNHK 494
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|673038498|ref|XP_008873210.1| (hypothetical protein H310_09031 [Aphanomyces invadans] >gi|574471327|gb|ETV98335.1| hypothetical protein H310_09031 [Aphanomyces invadans]) HSP 1 Score: 445.662 bits (1145), Expect = 3.457e-146 Identity = 221/480 (46.04%), Postives = 317/480 (66.04%), Query Frame = 0 Query: 92 DEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKEGRAQ 571 D+++A RRRL I G VPD + F+ + +LK +LRNIE SQ+K PTPIQMQ++P + RD+L APTGSGKTAAF +P LL L + + G R+++L PTRELA QI E QRL+ GR F + ++SKA AAT + YD+++ATP+RL+ + + V L V + LDEAD+LFE+G F+ Q+D+I AACT P++QR +FSAT+ ++++A SVL+DP+ +S+G + A ++TQ+L+FVG+EEGKL+A++QL+++G+ P+L+F++NK+RA+ELY EL YD + V +HADR+ EQR +++ R G VWVL+CTDL +RG+D + VN+V+N+D P S V+Y+HR+GRTGR GR G AVTF+TE DM LR IANV+KLSG VP WM LKK +K R+ + R RI T + +D++KA +R+ RA+ Sbjct: 193 DDIKALRRRLNIYVEGTVVPDPILEFAQMKTNATALKAVVLRNIEESQYKNPTPIQMQSIPAILKQRDVLGIAPTGSGKTAAFAIPMLLNLGAPDVR----GIRSVVLVPTRELAVQIHAEFQRLSVGRKFHIVLLSKASAATISSHSKTCTVNYDIVIATPLRLVHLIHKENVTLDTVDMICLDEADRLFEMG-----------------FVEQIDDIFAACTNPKMQRMMFSATMLQGVEEMAQSVLKDPIKISIGTKN---------AGASTITQKLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGVVWVLICTDLMSRGIDFKGVNMVINFDFPQSAVSYIHRIGRTGRNGRPGEAVTFFTENDMV---YLRTIANVMKLSGCDVPPWMLNLKKASMRK-RKQLLKAPPERHRIETVSGYDLQKANKRRLMRAK 638
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|1173954011|gb|OQS01510.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna]) HSP 1 Score: 445.662 bits (1145), Expect = 4.285e-146 Identity = 223/476 (46.85%), Postives = 316/476 (66.39%), Query Frame = 0 Query: 90 EEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDASLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRR 565 D+++ R+RL I G VPD + F+ + P A L+ +L NIE+SQ+K PTPIQMQA+P GRD+L APTGSGKTAAF +P LL LE A G R+++L PTRELA QI GE QRLA GR F ++++SKA AAT + YD+++ATP+RL+ + E +V L V + LDEAD+LFE+G F+ Q+DE+ AACT P +QR +FSAT+ ++D+A SVL+DP+ +++G + +N ++TQ L+FVG+EEGKL+A++QL+++G+ P+L+F++NK+RA+ELY EL YD + V +HADR+ EQR +++ R G+VWVL+CTDL ARG+D + VN+V+NYD P S V+Y+HR+GRTGR GR G AVTF+TE DM LR IANV+KLSG VP WM +KK ++ R+ + R RI T + +D++KA ++ Sbjct: 194 HSDDIKQLRKRLNISTWGTAVPDPIVEFAEMKGP-AGLRGVVLANIEASQYKNPTPIQMQAIPAALQGRDVLGIAPTGSGKTAAFAIPMLLNLE---APRQDQGIRSIVLVPTRELAVQIHGEFQRLAHGRKFHISLLSKASAATMASHAKACTVNYDVVIATPLRLVHLITESKVALDTVNMICLDEADRLFEMG-----------------FVEQIDEVFAACTNPSLQRMMFSATMLEGVEDMAQSVLKDPIKIAIGTKNAGAN---------TITQRLLFVGKEEGKLVAMKQLVQEGLKLPVLMFVQNKDRAKELYQELMYDGINVGAIHADRTKEQRDKVIKDFRTGSVWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRNGRQGEAVTFFTESDMV---YLRTIANVMKLSGCDVPDWMLSMKKASVRQ-RKQLLKAPPQRHRIKTVSGYDLKKAHKK 635
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|298708634|emb|CBJ26121.1| (DEAD box helicase [Ectocarpus siliculosus]) HSP 1 Score: 440.654 bits (1132), Expect = 4.845e-146 Identity = 233/437 (53.32%), Postives = 310/437 (70.94%), Query Frame = 0 Query: 92 DEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDAS-----LKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEA----GQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSG 519 +E+ FRRR+ IK +GE V D + SFS +P S +R LL N+E S WKEPTP+QMQA+P+L GRDLLA APTGSGKTAAFV+P +LRL A +G R +LLAPTRELA+QI +V RL+ GR +V +++KA A A + SGYD++V+TPMRL+ +RE V L V VVLDEADKLF+ G A+G S DK+F+GQVDE+LAAC++ +VQRALFSAT+ +++L+ SVLRDP+ ++VG T A + + Q LV+VGREEGKLLA+RQL+++G+ PP+LVFL++K+RA+ L+HEL YD + DVMHA R+ +QR ++++ R G +WVL+CTDL ARG+D + VN+V+NYD P S V+Y+HR+GRTGRAGR G AVT +TE DM SLR+IANVI+LSG Sbjct: 35 EEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAG-----AASGGS---DKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDPIFLTVG--------TQNAGAAD-IDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMN---SLRSIANVIRLSG 451
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|566013170|gb|ETI36081.1| (hypothetical protein F443_17720 [Phytophthora parasitica P1569] >gi|568008758|gb|ETL82973.1| hypothetical protein L917_16977 [Phytophthora parasitica]) HSP 1 Score: 445.277 bits (1144), Expect = 1.697e-145 Identity = 232/483 (48.03%), Postives = 325/483 (67.29%), Query Frame = 0 Query: 90 EEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDAS----LKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAAT-KDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKE 567 E++E++ RR+L I+ G +VP + SF+ + ++ +KR LL+NIE S++KEPT +QMQA+P + RD+LATAPTGSGKTAAF +P L L A +G R+++LAPTR+LA QI E RLAAG+ + ++SKA AAT + + +D+L+ATP+RL+ ++E +VDL V V LDEAD+L ELG F+ QVDEI AACT+P VQRA+FSAT+ +++LA +VLRDPV V+VG + A ++ Q+LVFVG+EEGKL+A++QLL++G+ P L+F++NKERA ELYHEL YD + + +HADR+ EQR ++ + R G VWVL+CTDL +RG+D +AVN+V+NYD P S V+Y+HR+GRTGR GR G+AVTF+TE DM LR IANV+K+SG +VP WM LKK K +E + R RI+T + +D++KA R K+ Sbjct: 214 EQEEVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL--AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKN---------AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTFFTEDDM---VYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLK-APPTRHRINTVSGYDLQKANRLKQ 664
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|570970893|gb|ETP34012.1| (hypothetical protein F442_17576 [Phytophthora parasitica P10297]) HSP 1 Score: 445.277 bits (1144), Expect = 2.404e-145 Identity = 232/483 (48.03%), Postives = 325/483 (67.29%), Query Frame = 0 Query: 90 EEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDAS----LKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAAT-KDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKE 567 E++E++ RR+L I+ G +VP + SF+ + ++ +KR LL+NIE S++KEPT +QMQA+P + RD+LATAPTGSGKTAAF +P L L A +G R+++LAPTR+LA QI E RLAAG+ + ++SKA AAT + + +D+L+ATP+RL+ ++E +VDL V V LDEAD+L ELG F+ QVDEI AACT+P VQRA+FSAT+ +++LA +VLRDPV V+VG + A ++ Q+LVFVG+EEGKL+A++QLL++G+ P L+F++NKERA ELYHEL YD + + +HADR+ EQR ++ + R G VWVL+CTDL +RG+D +AVN+V+NYD P S V+Y+HR+GRTGR GR G+AVTF+TE DM LR IANV+K+SG +VP WM LKK K +E + R RI+T + +D++KA R K+ Sbjct: 214 EQEEVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL--AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKN---------AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTFFTEDDM---VYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLK-APPTRHRINTVSGYDLQKANRLKQ 664
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|675174649|ref|XP_008896209.1| (hypothetical protein PPTG_04135 [Phytophthora parasitica INRA-310] >gi|568103904|gb|ETN18561.1| hypothetical protein PPTG_04135 [Phytophthora parasitica INRA-310]) HSP 1 Score: 445.277 bits (1144), Expect = 2.813e-145 Identity = 232/483 (48.03%), Postives = 325/483 (67.29%), Query Frame = 0 Query: 90 EEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDAS----LKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAAT-KDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKE 567 E++E++ RR+L I+ G +VP + SF+ + ++ +KR LL+NIE S++KEPT +QMQA+P + RD+LATAPTGSGKTAAF +P L L A +G R+++LAPTR+LA QI E RLAAG+ + ++SKA AAT + + +D+L+ATP+RL+ ++E +VDL V V LDEAD+L ELG F+ QVDEI AACT+P VQRA+FSAT+ +++LA +VLRDPV V+VG + A ++ Q+LVFVG+EEGKL+A++QLL++G+ P L+F++NKERA ELYHEL YD + + +HADR+ EQR ++ + R G VWVL+CTDL +RG+D +AVN+V+NYD P S V+Y+HR+GRTGR GR G+AVTF+TE DM LR IANV+K+SG +VP WM LKK K +E + R RI+T + +D++KA R K+ Sbjct: 214 EQEEVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL--AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFAACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKN---------AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTFFTEDDM---VYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLK-APPTRHRINTVSGYDLQKANRLKQ 664
BLAST of EWM24183.1 vs. NCBI_GenBank
Match: gi|568038678|gb|ETM36199.1| (hypothetical protein L914_17051 [Phytophthora parasitica]) HSP 1 Score: 443.736 bits (1140), Expect = 8.554e-145 Identity = 231/483 (47.83%), Postives = 324/483 (67.08%), Query Frame = 0 Query: 90 EEDEMRAFRRRLRIKARGENVPDCLPSFSLLPCPDAS----LKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAAT-KDEAGQGVFSGYDLLVATPMRLLQALREGRVDLRRVRAVVLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQDLAGSVLRDPVSVSVGLPSNRSNYTHAAAVPESVTQELVFVGREEGKLLALRQLLKQGVLPPILVFLENKERARELYHELCYDHLRVDVMHADRSTEQRAALLEKVRAGAVWVLLCTDLCARGLDLRAVNVVVNYDLPPSCVTYVHRVGRTGRAGRAGRAVTFWTERDMEEGGSLRAIANVIKLSGGQVPSWMAGLKKGGKKKGREGGREGGRGRGRISTRTAWDVEKAKRRKE 567 E++E++ RR+L I+ G +VP + SF+ + ++ +KR LL+NIE S++KEPT +QMQA+P + RD+LATAPTGSGKTAAF +P L L A +G R+++LAPTR+LA QI E RLAAG+ + ++SKA AAT + + +D+L+ATP+RL+ ++E +VDL V V LDEAD+L ELG F+ QVDEI ACT+P VQRA+FSAT+ +++LA +VLRDPV V+VG + A ++ Q+LVFVG+EEGKL+A++QLL++G+ P L+F++NKERA ELYHEL YD + + +HADR+ EQR ++ + R G VWVL+CTDL +RG+D +AVN+V+NYD P S V+Y+HR+GRTGR GR G+AVTF+TE DM LR IANV+K+SG +VP WM LKK K +E + R RI+T + +D++KA R K+ Sbjct: 214 EQEEVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANL--AAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELG-----------------FVEQVDEIFGACTHPRVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKN---------AGASTIDQKLVFVGKEEGKLVAMKQLLQEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTFFTEDDM---VYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLK-APPTRHRINTVSGYDLQKANRLKQ 664 The following BLAST results are available for this feature:
BLAST of EWM24183.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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