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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100020g67.5352.mrna |
| Orig protein id | gnl|cribi|Naga_100020g67.5352 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:461593..462975 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6413 ID=rna6413|Name=rna6413|organism=Nannochloropsis gaditana|type=mRNA|length=999bp
ATGCATTCCAGTAGCGGCTGGATATCTCTACCTTTGCAGTTAGGAGTGAT
TCTAGCAGTGACGTTGAGAGGGCATTGTCATTTGGCGGGCAGCTCCAACA
GCATCCAGGGCATGAGACCTCACAGTCTGGCATTCTTCGGAAATTGGGCC
ACACAAGCTCAGGCCTCAACGTCGTCAACAGGCACATCGCGCAGTACCCT
TGCCACGCCGCCACCTTCGAAGCTTGTGGATAAAGGGCCCAGTTTGCCCA
AGCTGTATGGCGGATGGTTTGATAACACCCTTGTCAATCAAGCCTCCGCC
GCCATAAATGCGGCGGTCAGAGACGGTGTCAAGACTTCAGAGGTGCTTTT
CCCACCCCTTCCTAACATGGAAGAGCGTGAATTTGGGACTGAGCTTAATA
TGAATTATAATAAGGCGGTGGCAGCTCGTCTCAAAGGGCCTGACAACATT
TTGAGGAGACAAAGTGTGGCTTACGCAAACGTGGACATTGCCAGCCGAGT
TGCTGGCAAGACGGGCAAACGTACGCTGATCTTGACATACGACGGGGCCG
TGGACCCAAATATCATAAAAATATCTAGCAAGGCTATGCTTACGCGCATT
AATGCTCTGGACGTGGAGGCCGCATCACGCGCAAATGATATTATATTCGC
CCTTTCCCCGGGGACGGGATCTCAATGGAGCAAAGCAAGCGGGTTAAAAA
CGGATGCACCGGTGGTGGCAATCAACGCGCCTTTTTCATTGAATTATGAT
ATTGCACAGGGTGGGAAATGGGAGCCGATTTACGTTGTCAAACGTGTCAC
GAAAGGTTGGGTATTTAGGGCATACCCTCATGAGTTTAAGGTCTACCTAG
ACACGCCGGATGGTTCGGTGGAACTTATCAAGGAGTTTAGGGGAGGGGTG
GTTCCAAAGCTACGTGAGGTGTCATCCATCGTTCGCGAGGAGAGCCAAAG
GCGGGGATATGCTGCACTGAATGATCGATATTTAACTCAGCGTCTTTAA back to topprotein sequence of rna6413 >rna6413-protein ID=rna6413-protein|Name=rna6413|organism=Nannochloropsis gaditana|type=polypeptide|length=460bp
MSSTGTRDFLNGLRIAGRLWGSHGDKITYAAHGRNYDDERAAKTIEEFQA
TTMSAVTGAGLEDQSRGNGSPSIMRQVSRDLVISPSSPFIARQSSSPTSN
WGENGNPPFIMRQTSLDFVPSGASGVSSPPPLIARQSSRDMPLSLILRQH
SRELSPTSPTYKDKKLNANLDDAAVFRPIGGSQSGNSKLWQSPTSLLTPF
TSSSPMASPKALRPSGRRSPLAHSLSYEYTRIDEKGISRCVEASLAPPRE
TNHQIGTSLPNPIVKEQSNLMDIHDYEPYRSKHTAAKAILDAVQTSEYDG
AETHLNPIAALSAADKADLINEARIRDRVTNVSKVSVFSRKKSLGRRSTS
ERVQENSKDTEIRGQQSDSSKGNIFSRKISFGRRSTSERWKGNNGDTEKC
DERSDCSTSNEFNRTKSSGRKSTDDTSMAGQGEIDFGAVKWRPGLILSKL
IRKSSSVQIS back to topmRNA from alignment at CM002468.1:461593..462975+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6413 ID=rna6413|Name=rna6413|organism=Nannochloropsis gaditana|type=mRNA|length=1383bp|location=Sequence derived from alignment at CM002468.1:461593..462975+ (Nannochloropsis gaditana)
ATGTCTAGCACGGGAACTCGTGATTTTCTCAATGGTCTCCGCATTGCTGG
ACGACTTTGGGGTTCTCACGGAGATAAGATTACTTATGCCGCTCATGGGC
GAAACTACGACGATGAGCGGGCTGCCAAGACAATCGAGGAATTTCAAGCT
ACGACTATGTCTGCTGTAACTGGCGCCGGTCTCGAAGACCAGTCGCGTGG
CAACGGGAGTCCTTCAATTATGCGACAGGTCTCTAGGGATCTAGTTATTT
CCCCGTCATCTCCATTTATTGCGCGCcagtcctcttccccgacgTCGAAC
TGGGGAGAAAACGGAAATCCACCTTTCATCATGCGTCAGACTTCACTTGA
CTTCGTACCATCTGGTGCAAGTGGTGTTTCctcgccaccaccactcATCG
CTCGGCAATCCTCCCGAGACATGCCCTTGTCATTAATCTTGCGGCAGCAC
TCCCGCGAACTTTCTCCCACCAGCCCAACGTATAAAGACAAAAAATTGAA
CGCTAACTTGGATGATGCAGCCGTATTCCGCCCGATTGGCGGATCACAGA
GTGGAAATAGCAAGCTTTGGCAGAGTCCTACTTCATTGTTGACGCCTTTT
ACATCTTCAAGTCCGATGGCTAGTCCTAAAGCTTTGCGACCAAGTGGGAG
GCGCTCTCCCTTGGCTCACTCTTTATCGTACGAGTACACACGAATAGACG
AAAAGGGCATATCGCGCTGTGTTGaggcctcccttgctccGCCGCGAGAG
ACAAACCATCAGATAGGAACAAGTCTGCCCAATCCAATTGTGAAGGAACA
AAGTAATTTAATGGACATTCATGATTATGAGCCCTACCGTTCAAAGCATA
CAGCAGCGAAAGCTATTCTTGACGCGGTACAAACCTCAGAATACGACGGA
GCGGAGACACATCTGAATCCCATAGCTGCACTCTCCGCTGCAGACAAAGC
TGATTTGATTAATGAAGCTCGAATTCGTGATCGAGTTACCAATGTCTCGA
AAGTCAGTGTGTTTAGTCGTAAGAAAAGTCttggaagaaggagcacaAGC
GAAAGGGTACAAGAAAATAGCAAAGACACTGAAATCCGCGGTCAACAAAG
TGATAGCTCGAAGGGCAACATATTTAGCCGTAAGATAAGttttgggagga
gaagcactAGTGAAAGGTGGAAGGGTAATAATGGAGATACTGAGAAGTGC
GATGAAAGAAGCGATTGCTCCACGAGCAATGAATTCAACCGTACGAAAAG
TTCTGGGAGAAAAAGTACGGATGACACTTCGATGGCCGGCCAGGGTGAGA
TTGACTTCGGTGCTGTTAAGTGGAGGCCTGGCCTGATTTTGTCCAAACTC
ATTCGTAAAAGTAGTAGTGTTCAAATCTCATGA back to topCoding sequence (CDS) from alignment at CM002468.1:461593..462975+ >rna6413 ID=rna6413|Name=rna6413|organism=Nannochloropsis gaditana|type=CDS|length=1383bp|location=Sequence derived from alignment at CM002468.1:461593..462975+ (Nannochloropsis gaditana)
ATGTCTAGCACGGGAACTCGTGATTTTCTCAATGGTCTCCGCATTGCTGG
ACGACTTTGGGGTTCTCACGGAGATAAGATTACTTATGCCGCTCATGGGC
GAAACTACGACGATGAGCGGGCTGCCAAGACAATCGAGGAATTTCAAGCT
ACGACTATGTCTGCTGTAACTGGCGCCGGTCTCGAAGACCAGTCGCGTGG
CAACGGGAGTCCTTCAATTATGCGACAGGTCTCTAGGGATCTAGTTATTT
CCCCGTCATCTCCATTTATTGCGCGCcagtcctcttccccgacgTCGAAC
TGGGGAGAAAACGGAAATCCACCTTTCATCATGCGTCAGACTTCACTTGA
CTTCGTACCATCTGGTGCAAGTGGTGTTTCctcgccaccaccactcATCG
CTCGGCAATCCTCCCGAGACATGCCCTTGTCATTAATCTTGCGGCAGCAC
TCCCGCGAACTTTCTCCCACCAGCCCAACGTATAAAGACAAAAAATTGAA
CGCTAACTTGGATGATGCAGCCGTATTCCGCCCGATTGGCGGATCACAGA
GTGGAAATAGCAAGCTTTGGCAGAGTCCTACTTCATTGTTGACGCCTTTT
ACATCTTCAAGTCCGATGGCTAGTCCTAAAGCTTTGCGACCAAGTGGGAG
GCGCTCTCCCTTGGCTCACTCTTTATCGTACGAGTACACACGAATAGACG
AAAAGGGCATATCGCGCTGTGTTGaggcctcccttgctccGCCGCGAGAG
ACAAACCATCAGATAGGAACAAGTCTGCCCAATCCAATTGTGAAGGAACA
AAGTAATTTAATGGACATTCATGATTATGAGCCCTACCGTTCAAAGCATA
CAGCAGCGAAAGCTATTCTTGACGCGGTACAAACCTCAGAATACGACGGA
GCGGAGACACATCTGAATCCCATAGCTGCACTCTCCGCTGCAGACAAAGC
TGATTTGATTAATGAAGCTCGAATTCGTGATCGAGTTACCAATGTCTCGA
AAGTCAGTGTGTTTAGTCGTAAGAAAAGTCttggaagaaggagcacaAGC
GAAAGGGTACAAGAAAATAGCAAAGACACTGAAATCCGCGGTCAACAAAG
TGATAGCTCGAAGGGCAACATATTTAGCCGTAAGATAAGttttgggagga
gaagcactAGTGAAAGGTGGAAGGGTAATAATGGAGATACTGAGAAGTGC
GATGAAAGAAGCGATTGCTCCACGAGCAATGAATTCAACCGTACGAAAAG
TTCTGGGAGAAAAAGTACGGATGACACTTCGATGGCCGGCCAGGGTGAGA
TTGACTTCGGTGCTGTTAAGTGGAGGCCTGGCCTGATTTTGTCCAAACTC
ATTCGTAAAAGTAGTAGTGTTCAAATCTCATGA back to top
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