EWM24412.1, cds6261 (CDS) Nannochloropsis gaditana

Overview
NameEWM24412.1
Unique Namecds6261
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:156080..156225 +
Alignment locationCM002468.1:156459..156599 +
Alignment locationCM002468.1:156795..156942 +
Alignment locationCM002468.1:157102..157215 +

Link to JBrowse

Properties
Property NameValue
End range.
End range157215
Start range156080
Start range.
Protein idEWM24412.1
Productinsulin-degrading enzyme
Partialtrue
Orig transcript idgnl|cribi|Naga_102121g1.2718.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:156080..156225 +
CM002468.1supercontigCM002468.1:156459..156599 +
CM002468.1supercontigCM002468.1:156795..156942 +
CM002468.1supercontigCM002468.1:157102..157215 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011249Metalloenz_LuxS/M16
IPR011237Pept_M16_dom
Homology
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|585105828|gb|EWM24412.1| (insulin-degrading enzyme, partial [Nannochloropsis gaditana])

HSP 1 Score: 366.696 bits (940), Expect = 3.113e-128
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 PLQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVREGGR 183
            PLQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVREGGR
Sbjct:    1 PLQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVREGGR 183          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|873219365|emb|CEM37823.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 135.576 bits (340), Expect = 1.457e-33
Identity = 76/178 (42.70%), Postives = 108/178 (60.67%), Query Frame = 0
Query:    3 QVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKE-GYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVR 179
            +++  D L E  Y A LAGLSY +DF AKGL+L+ GGYND+L DF  +++ R+       +   +    FSR++DI  RE A+FDN QPY+HA Y  + L E P   +  VR AL  L+ SDL  F+  S++F+  G+G  L+QGN+++ EA  L+  V    PF + LP  +RPT R
Sbjct:  713 ELSVNDDLNEFAYDAGLAGLSYGVDFNAKGLQLSFGGYNDKLQDFVERVSRRI------ATHMPTDEDKFSRFQDIARREFAAFDNQQPYEHARYFISRLTEIPTPSVEAVRQALEKLTLSDLQRFS--STIFESGGFGETLIQGNLQQSEAKKLVATVENSFPF-TPLPPDQRPTRR 881          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|551661652|ref|XP_005833592.1| (hypothetical protein GUITHDRAFT_70428 [Guillardia theta CCMP2712] >gi|428177734|gb|EKX46612.1| hypothetical protein GUITHDRAFT_70428 [Guillardia theta CCMP2712])

HSP 1 Score: 127.872 bits (320), Expect = 8.662e-31
Identity = 75/187 (40.11%), Postives = 106/187 (56.68%), Query Frame = 0
Query:    2 LQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSV------LP-VGERPTVREG 181
            L  +  DALTE +Y A++AGL Y  DFT +G+RL  GGYND+LADF   +A R+ +   E           +RYKD+++R+L +F   QPYQHA   + L LE P +  + V   L  +S  +L  +     L+++GY   L+QGNVREEEA A+   +  +  F+ V      LP + E P VREG
Sbjct:  564 LTASLADALTEFSYDAAVAGLQYSCDFTQRGVRLNFGGYNDKLADFLLSVAERIKTHVPE------GEDKLARYKDLISRDLRAFTTQQPYQHAAEFSRLCLELPAYLPTDVERELDGISLKELKEWT--KRLWEQGYSQLLIQGNVREEEARAVAGRMREIFSFKEVPEEQRSLPRLLELPIVREG 742          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|219112027|ref|XP_002177765.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410650|gb|EEC50579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 125.946 bits (315), Expect = 3.758e-30
Identity = 67/171 (39.18%), Postives = 108/171 (63.16%), Query Frame = 0
Query:    2 LQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQ--VRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVL 170
             +V+  D + E  Y ASLAGL+YD+    +G+RLT GGYND+L  F   I+ +L +  +++    +S S F RYKD V R L++FD  QPY HA Y++ + L+ P++      +R A+  ++ SDLI +   ++L+K G G AL+QGN  ++EA+ L++ +  VLPF+ ++
Sbjct:  577 FEVSIADKIGEYAYDASLAGLTYDVKIMPRGIRLTFGGYNDKLKRFASYISLKLTTEIRDV--LPTSESVFDRYKDQVMRGLSAFDVKQPYFHASYYSQIALQPPRFQYDNTALREAIREVNLSDLIEYV--NTLWKSGRGEALIQGNFDQKEAMELVKNIGDVLPFRPIV 743          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|1210529486|dbj|GAX11828.1| (insulysin [Fistulifera solaris])

HSP 1 Score: 120.168 bits (300), Expect = 4.375e-28
Identity = 66/180 (36.67%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    2 LQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLE--DPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVR 179
             ++   D LTE  Y ASLAGL+YD+    +G+RLT GGYN++L  F   ++ +L    ++    +     F RYKD + R L SFD  QPY HA Y++ L L+    ++  +++R A   L+  DL+ +   + L+K G G AL+QGN+ E EA+ +++++ +VLPFQ +      P +R
Sbjct:  706 FELCATDRLTEYAYDASLAGLTYDIKVLPRGVRLTFGGYNEKLVQFAAYVSRKLSKNVRDFLPKNDQE--FERYKDQIMRMLVSFDVKQPYAHAAYYSTLALQPLHYQYDTNELREATRRLTLPDLVEYT--NLLWKSGKGEALIQGNLIEPEALRIVDQITSVLPFQPISEADVPPRIR 881          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|1210517276|dbj|GAX23911.1| (insulysin [Fistulifera solaris])

HSP 1 Score: 119.013 bits (297), Expect = 8.602e-28
Identity = 65/180 (36.11%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    2 LQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLE--DPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVR 179
             ++   D LTE  Y ASLAGL+YD+    +G+RLT GGYN++L  F   ++ +L    ++    +     F RYKD + R L SFD  QPY HA Y++ L ++    ++  +++R A   L+  DL+ +   + L+K G G AL+QGN+ E EA+ +++++ +VLPFQ +      P +R
Sbjct:  709 FELCATDRLTEYAYDASLAGLTYDIKVLPRGVRLTFGGYNEKLVQFAAYVSQKLSKNVRDFLPKNDQE--FERYKDQIMRMLVSFDVKQPYAHAAYYSTLAIQPLHYQYDTNELREATRRLTLPDLVEYT--NLLWKWGKGEALIQGNLIEPEALKIVDQITSVLPFQPISAADVPPRIR 884          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|1072230890|gb|OEU15623.1| (Peptidase_M16-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 108.997 bits (271), Expect = 3.060e-24
Identity = 57/164 (34.76%), Postives = 94/164 (57.32%), Query Frame = 0
Query:    8 DALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPIS--QVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSV 169
            D L E  Y A LAGL+YD+    +G+RLT GGYND+L DF + +  ++ +  + +     +   F RY+D++ R  A FD  QPY H  Y++ L+L+ P +  +  ++  A   ++  +LI++    S++  G G AL+QGNV E +A AL+  +   L F+ +
Sbjct:  576 DKLGEYAYDAGLAGLTYDVRIVPRGVRLTFGGYNDKLEDFAKYVTKQITTNLKNILPKDEAE--FDRYQDLLIRSFAGFDVKQPYSHCAYYSQLMLQPPGYQYNNQELLEATKKVTLPELISYV--GSVWSSGKGIALVQGNVDENQAKALVSTIDKALAFKPI 735          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|298705223|emb|CBJ34143.1| (insulysin isoform 1 [Ectocarpus siliculosus])

HSP 1 Score: 105.145 bits (261), Expect = 5.644e-24
Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = 0
Query:    2 LQVAFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNV 148
             +++  + L E  Y A +AGL Y LDFT +GLR++  G++D++ DF  K+A  + ++      + S    F R +D+V R+L S+D  QPYQHA  +A +  EDP++ + ++R  L S+  S++      S +F +  G  LLQGN+
Sbjct:  175 FELSLDERLNEYAYDAQMAGLGYSLDFTTRGLRMSFAGFSDKMPDFIEKVAQAVATY------TPSDPVEFERLRDVVRRDLTSYDTQQPYQHAMSNAAVASEDPRYTVQEIRDTLDSVKMSEIKPLV--SRVFGQAEGLGLLQGNL 313          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|698795994|ref|XP_009831026.1| (hypothetical protein H257_07263 [Aphanomyces astaci] >gi|574113696|gb|ETV79185.1| hypothetical protein H257_07263 [Aphanomyces astaci])

HSP 1 Score: 103.219 bits (256), Expect = 2.554e-22
Identity = 60/167 (35.93%), Postives = 90/167 (53.89%), Query Frame = 0
Query:    5 AFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLP 171
            A +D LTE TY A LAG+ Y L FTA  L L  GGY+D+L    + I + +  F+       +    F R KD   R   +F+   PY+HA Y ++ LLED KW +++  AA+  ++ +DL+  A  ++LF+E +  A   GNV    A  LL++  A +  + V P
Sbjct:  552 AIKDQLTEYTYDAELAGMRYSLSFTATALELYGGGYSDKLPVLVQLIVANMVHFNM------TDDETFHRLKDKTKRSYDNFERDDPYKHALYFSSCLLEDTKWMVAEKAAAIAHVTRADLMEHA--AALFRELFVEAYYHGNVDAATATTLLDDALATIGARPVFP 710          
BLAST of EWM24412.1 vs. NCBI_GenBank
Match: gi|298710797|emb|CBJ32214.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 99.3673 bits (246), Expect = 6.184e-21
Identity = 58/175 (33.14%), Postives = 95/175 (54.29%), Query Frame = 0
Query:    5 AFQDALTEATYPASLAGLSYDLDFTAKGLRLTVGGYNDRLADFTRKIASRLYSFSQELSSSSSSSSAFSRYKDIVTRELASFDNLQPYQHAGYHANLLLEDPKWPISQVRAALTSLSPSDLITFASPSSLFKEGYGTALLQGNVREEEAVALLEEVAAVLPFQSVLPVGERPTVR 179
               + LTE TY A  AGLS++L    +G+ L+  GY D++ +F  K+A  + +++       S    F R +D++ R  +SFDN QPY+HA  +A+   EDP + + ++ A L S+  +DL   A  S +  E  G  L+QGN+++E+    +E V   L   + LP  +RP  +
Sbjct:  620 CLNEHLTEYTYDALTAGLSFNLSVNTRGIGLSFQGYGDKMPEFIDKVAEAVATYT------PSDPVEFERLRDVLRRRCSSFDNEQPYRHAMANADEATEDPTYTLREIGATLDSIELADLRPLA--SRVLAEAEGVCLMQGNLQKEDVPRYMEGVRRWLK-PTPLPEDKRPETK 785          
The following BLAST results are available for this feature:
BLAST of EWM24412.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105828|gb|EWM24412.1|3.113e-128100.00insulin-degrading enzyme, partial [Nannochloropsis... [more]
gi|873219365|emb|CEM37823.1|1.457e-3342.70unnamed protein product [Vitrella brassicaformis C... [more]
gi|551661652|ref|XP_005833592.1|8.662e-3140.11hypothetical protein GUITHDRAFT_70428 [Guillardia ... [more]
gi|219112027|ref|XP_002177765.1|3.758e-3039.18predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210529486|dbj|GAX11828.1|4.375e-2836.67insulysin [Fistulifera solaris][more]
gi|1210517276|dbj|GAX23911.1|8.602e-2836.11insulysin [Fistulifera solaris][more]
gi|1072230890|gb|OEU15623.1|3.060e-2434.76Peptidase_M16-domain-containing protein [Fragilari... [more]
gi|298705223|emb|CBJ34143.1|5.644e-2435.37insulysin isoform 1 [Ectocarpus siliculosus][more]
gi|698795994|ref|XP_009831026.1|2.554e-2235.93hypothetical protein H257_07263 [Aphanomyces astac... [more]
gi|298710797|emb|CBJ32214.1|6.184e-2133.14conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6276rna6276Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications