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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100397g2.9995.mrna |
| Orig protein id | gnl|cribi|Naga_100397g2.9995 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002468.1 | supercontig | CM002468.1:132762..133792 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6267 ID=rna6267|Name=rna6267|organism=Nannochloropsis gaditana|type=mRNA|length=2097bp
ACTTCCGCAACTGCCATAGGACTTAAATCTTCATAAAGTCATACTAGTAT
AATGAAAACAATTGCTGTCCTTTCTTGTGCTATTCTAGCTCTCAGTGGGC
AGCCCAGAGCCGTCAACGCGCAAGAATATGTGGCTGGCATGTTCTCGGAT
TTTGGCATGGGCATCCAGCAAGTCCATTTAGCCCAAGGGAAGGACTACTC
TACCATGGTCGTGTCGTGGCTGACTGCTTATGAGGCCCCCACGATCATTC
GCTATGGAACAAAGCTTAGGAAGCTTGATATGACTGCGACCTCGACGGAC
GTGGTTCAGTACACCGCATTCAATACGACGAGTGGATACATTCACCACGT
TCCCCTCAGGGATCTCAAACCCTCCACGACCTACTACTACCTGATTGGAG
AGACTACCAACCAGGACGGCTCGGCCAGCATTCGCTACTTTACGACCCTG
CCAAAAGTGGGCAAGCGGATCAAGAACTTTCAGCTGGCTGTGGCTGCAGA
CATTGGTCAGACGAACGACTCTCTACTCACCATCGACCATCTCCTTCAGG
ACCCCGACCCAGCCATGCTCTTGCTTGCGGGTGATACGTCCTATGCCGAC
TGCGACCCACAAAGGTGGGACACGTTCTTCAATTTCATGCAGCCCTTCGC
AGAGCAACGCCCCATGATGACGCTGGCAGGCAATCACGAGATTGAGTTTG
ACAACACGACTGGCGTGGCCACTGGCTTCCAGGCCTACATCAACCGGTAC
CGCATGCCGGAAGTGCGTCCGACAGAGATCAATTGCCCTTTCGAATTCAC
CGATTTCTGCGCGCCTTCCGTGTATTTCAGCTGCTATGATTATGGCAATG
CTTACTACTCCTTCGATGCGGCTACGGTGCATGTCATCATGCTTAGCAGC
TATACCTACATTAATGAGTCTACGCCCCAGTACAACTGGCTCGTCAAAGA
CTTGGCCAGTGTCAATCGAAGGAAGACGCCCTGGGTGGTGGTGATGACCC
ACTCCCCTATGTACAACAGCAATCAGGCCCACCAAAATGAGGCTCAGTCT
ATCGCCATGAAAGCTGCCATCGAGCCTTTGTTGATGCAGTACAAGGTCAA
CATCGTCATCGCCGGCCACGTGCATGCCTATGAACGCACCTATCCAGTCT
ACCAGAACGTTGTTGATTACAAAGACGGCATCACCTACATCGTGGCAGGT
GACGCGGCCAACCGGGAGGGCCATGCATCCGAATACATCAGCCCCATTCC
CTCTTGGAGCGCTGTGCGGAATGGGACGCAGTACGGTCACGGGAAGATGA
CCTTCCACAACGATCGACGCATGACGTGGGCCTGGTACCGCAATCTCGAC
GGAGAAAAGATTCTTCGGGACGAGATCAAGATATGCAACACGGCCAAGGG
TCTGCCTGTCAGCTGTGGCAAGATTAATGCCAAGAGAACCAAGCTCAGCA
AGTTCAACCCAGGACGCGCGCTGGCCCCGGACCTGCATAGTACTGAGCCG
GTGGAAGCCACCACGGCGACGAAAGCTGTCAAAGCGTAGGATTACGACCG
GGTCTCCATACTTATATAGCCCCGCCGCAATAGGAGACTTCTCACGTGTC
GTCACGGTGGTATTTAAAAGCGTCGACGATGGCAGAGGGGAATTCGCCCT
AGTCTTACTTCTATGTCTCACTCTCATCCTCGGTTATACTCGTGTACCCT
ACCCGAGACACGGATCCTCCAGCATGCAGCTTTCAGGTATCCATGACACT
TTTTATGATTATTTGACCTGAACAGATGTAGGGCACAAAAGCCGTGCACT
TCGACCTTGCGTAGAGGTATGGCGTAGTCTGTATTGAAAGTAAACATTAT
TTTGGGGCTTGAGACAAAATCTTAGGGTGAAAGAAGCGGGTACGAAGGCG
ATCATTGACCGGCAAAGCACGTGAATTGGCGGATTGCAAGATTTGCCTAT
CTCAAAAGCTTAGGGTCAATCGAAATGCGTGCTCCGACACACACTCGTTT
CCTCCCGGGAATTATTTCTTTTCCAGGACACAGCGCTTTCAAGCTCGTTT
ATCGAACATTTGTGTGCTTCCAATTACAGAACAAGACTGGTAACACT back to topprotein sequence of rna6267 >rna6267-protein ID=rna6267-protein|Name=rna6267|organism=Nannochloropsis gaditana|type=polypeptide|length=152bp
MPFVLLIYIDNHLLYPASDSFPYRKHTMEFSHEPEVVSPKNRRITESGRG
KWPGRGRRLGECRPRTGRAKKEECKNLPPREEDQGEERRNSGKEAGKAGA
EKEGGFGEKIGRNVKGQREKDTGRKAAIQGEREHGGCRGKRKSLEVILVD
SD back to topmRNA from alignment at CM002468.1:132762..133792- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6267 ID=rna6267|Name=rna6267|organism=Nannochloropsis gaditana|type=mRNA|length=1031bp|location=Sequence derived from alignment at CM002468.1:132762..133792- (Nannochloropsis gaditana)
CAGTGGCGCCGAAAAGGCAAGATGGTGCGTCATGGCCGAAGCAGAAGCTC
GCAAACCGTACAGAGACCGAGAAAAAGGAAAAGTAAACGTCCTTGTCCTT
CAGGTATTGGGTGTCGATTTCAGCATGAGATGCAGGTAGGCCCCCTTTCA
CCGATAACTTATATGCGAGAGTTTACCTGATGTTCTTCCTGTCAGCGTAT
ATACCACGTGTGTTTTACAAAAGAGCTCTTTTGTCTCAAGACCTTTAAAT
ATTTTCTGTGCAATGCACTTTACATGCCATTCGTGCTGCTTATTTATATC
GATAACCACCTACTTTACCCTGCCTCCGACTCGTTTCCGTATCGTAAGCA
TACCATGGAATTTTCACACGAACCCGAGGTGGTATCCCCAAAAAATCGAA
GGATTACCGAAAGCGGTCGAGGAAAATGGCCCGGTCGGGGGCGTAGGCTG
GGGGAATGCCGGCCTCGGACAGGACGAGCCAAGAAGGAGGAATGTAAAAA
CCTACCACCGAGGGAGGAGGATCAAGGAGAAGAAAGAAGAAATTCAGGAA
AAGAAGCTGGAAAAGCGGGGGCTGAGAAGGAAGGAGGATTCGGTGAAAAG
ATAGGTCGAAATGTGAAGGGGCAACGAGAGAAGGACACGGGAAGGAAAGC
CGCGATTCAGGGGGAAAGGGAGCATGGAGGGTGCAGGGGGAAGAGAAAAA
GCCTGGAGGTGATACTGGTGGACAGTGATTAGGAGGAAGGTATCGGCGGA
GGCCGGGAGAATGGACAGGGCTGAATGGAAAGAATGGGAAGGGCGAGAAG
AAAGCAGGGCAGGGATTTGAATATGGGCCCCGCTTGACCATGCGACGGCC
TGGAGGAAGGGCCGGGGGAATCGGAGGGGGAGGGAAGGAAGCAAAGTACT
TGACCAAGAGAAGTTGTGTAGGACATGGATCGAAAGTGTTACCAGTCTTG
TTCTGTAATTGGAAGCACACAAATGTTCGATAAACGAGCTTGAAAGCGCT
GTGTCCTGGAAAAGAAATAATTCCCGGGAGG back to topCoding sequence (CDS) from alignment at CM002468.1:132762..133792- >rna6267 ID=rna6267|Name=rna6267|organism=Nannochloropsis gaditana|type=CDS|length=459bp|location=Sequence derived from alignment at CM002468.1:132762..133792- (Nannochloropsis gaditana)
ATGCCATTCGTGCTGCTTATTTATATCGATAACCACCTACTTTACCCTGC
CTCCGACTCGTTTCCGTATCGTAAGCATACCATGGAATTTTCACACGAAC
CCGAGGTGGTATCCCCAAAAAATCGAAGGATTACCGAAAGCGGTCGAGGA
AAATGGCCCGGTCGGGGGCGTAGGCTGGGGGAATGCCGGCCTCGGACAGG
ACGAGCCAAGAAGGAGGAATGTAAAAACCTACCACCGAGGGAGGAGGATC
AAGGAGAAGAAAGAAGAAATTCAGGAAAAGAAGCTGGAAAAGCGGGGGCT
GAGAAGGAAGGAGGATTCGGTGAAAAGATAGGTCGAAATGTGAAGGGGCA
ACGAGAGAAGGACACGGGAAGGAAAGCCGCGATTCAGGGGGAAAGGGAGC
ATGGAGGGTGCAGGGGGAAGAGAAAAAGCCTGGAGGTGATACTGGTGGAC
AGTGATTAG back to top
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