EWM24489.1, cds6183 (CDS) Nannochloropsis gaditana

Overview
NameEWM24489.1
Unique Namecds6183
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:822445..822759 -
Alignment locationCM002467.1:822233..822339 -
Alignment locationCM002467.1:821962..822079 -
Alignment locationCM002467.1:821715..821785 -
Alignment locationCM002467.1:821446..821513 -
Alignment locationCM002467.1:821190..821272 -
Alignment locationCM002467.1:820902..820982 -
Alignment locationCM002467.1:820558..820680 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24489.1
Productshort-chain dehydrogenase reductase
Orig transcript idgnl|cribi|Naga_100782g2.2123.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:822445..822759 -
CM002467.1supercontigCM002467.1:822233..822339 -
CM002467.1supercontigCM002467.1:821962..822079 -
CM002467.1supercontigCM002467.1:821715..821785 -
CM002467.1supercontigCM002467.1:821446..821513 -
CM002467.1supercontigCM002467.1:821190..821272 -
CM002467.1supercontigCM002467.1:820902..820982 -
CM002467.1supercontigCM002467.1:820558..820680 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR020904Sc_DH/Rdtase_CS
IPR002198DH_sc/Rdtase_SDR
IPR016040NAD(P)-bd_dom
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|585105970|gb|EWM24489.1| (short-chain dehydrogenase reductase [Nannochloropsis gaditana])

HSP 1 Score: 665.611 bits (1716), Expect = 0.000e+0
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER
Sbjct:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|553192919|ref|XP_005855670.1| (short-chain dehydrogenase reductase [Nannochloropsis gaditana CCMP526] >gi|422293388|gb|EKU20688.1| short-chain dehydrogenase reductase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0
Identity = 313/380 (82.37%), Postives = 315/380 (82.89%), Query Frame = 0
Query:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKL--PGC---------IVFTSSVSG----------------------YMP--------------------------SPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQ  L  P           I+F SSV G                      +MP                          SPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER
Sbjct:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQVSLISPSSSRFHTVFMPIIF-SSVHGASVVPPLLHPRTHLPPDLGWTAHMPFRAIFLSQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 379          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|585105971|gb|EWM24490.1| (short-chain dehydrogenase reductase [Nannochloropsis gaditana])

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQ 281
            MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQ
Sbjct:    1 MGCRLTDSLALPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKTHQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQ 281          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|676389129|ref|XP_009037843.1| (hypothetical protein AURANDRAFT_27825 [Aureococcus anophagefferens] >gi|323451329|gb|EGB07206.1| hypothetical protein AURANDRAFT_27825 [Aureococcus anophagefferens])

HSP 1 Score: 364.385 bits (934), Expect = 4.821e-123
Identity = 179/312 (57.37%), Postives = 232/312 (74.36%), Query Frame = 0
Query:   11 LPMPVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKT-HQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            + +PVFL+ + +AAPT +W   YFLPL++++L G QDLKKKY A WA+VTGGS+GIGRAI + LA QGLNV V ++ D  L+  V EL +A+  QEF AVGV FAPG  YL KI +AT D DVQI+FNNAG+I+TGFFD+QPL K L N+ECNATAAV ITHHF   +++K L GCIVFTSS S Y+P+PF+ +YGATKAF+SQFAA +AVE++ +GIDV  +HPSPVAS FY K  H+++ ++  KK AV P ELP +IF+ IGRC   D G  AV +R G A L Y+A+    A +A  LPD+++ +K+R
Sbjct:    1 MAVPVFLLYI-LAAPTALWLAAYFLPLLYIRLRGVQDLKKKYGATWAVVTGGSTGIGRAICEELAKQGLNVVVAALPDKFLEPAVAELSAAYKGQEFVAVGVSFAPGADYLEKIKAATADKDVQIVFNNAGFIVTGFFDTQPLGKHLVNMECNATAAVAITHHFAAAMMRKGLKGCIVFTSSASAYIPNPFAIIYGATKAFMSQFAASIAVELQCKGIDVCVIHPSPVASNFYNKVEHKIDSMESFKKLAVDPSELPREIFASIGRCVLRDVGNTAVGMRLGVALLPYSALAHIIALVAPFLPDYVENDKKR 311          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|298706063|emb|CBJ29173.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 356.295 bits (913), Expect = 6.287e-120
Identity = 168/301 (55.81%), Postives = 222/301 (73.75%), Query Frame = 0
Query:   22 IAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEK-THQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            +A PT+VW  TYF+PL+ + +L PQ+LKKKY A+WALVTGG SGIG+A+V+ LA+QGLNV +VSMDD  L +T   + S FP QEFR VG  F+PG  Y+ KI + T DI+VQ +FNNAG+I+TGF++S    KQ+AN+ECNATAA  I+HHF+ ++I++K  GC+VFTSSV+ Y P+PFS+MYGATKAFLS  AA L+VEV+ +GIDV+SVHPSPVAS+FY    H +E++D  K++AV P+ LP +I   IGR  W D G  AV VR GT  L+YN +   F+ +   LPD+ K +  R
Sbjct:   12 LAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|1210514714|dbj|GAX26193.1| (hypothetical protein FisN_16Lh008 [Fistulifera solaris])

HSP 1 Score: 333.183 bits (853), Expect = 1.555e-110
Identity = 164/300 (54.67%), Postives = 214/300 (71.33%), Query Frame = 0
Query:   23 AAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEK-THQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            A PTV W   Y +P I+M      +LKKKY A+WALVTGG SGIG+A+   LA QGLNV VVS+DDD LK T++EL+  FPKQEFR+VGV FAPG  Y+  II ATKDI + I+F NAG+++TGF D  P+EK LAN+ECNAT+AV ++HHF++ L+Q K  GCIVFTSSV+G++P+PF++MY +TKAF+SQFAACL +EVK  GIDV ++HPSPVAS FY K  H+++M++   K+AV P+ + + +   IG C   D G  A   R GT  L YN   + FA  A  LPD+  +N+ R
Sbjct:   30 AFPTVFWLVAYLIPQIYMAFRPVPNLKKKYAAEWALVTGGGSGIGKALCFALAQQGLNVVVVSLDDDFLKTTMQELKQQFPKQEFRSVGVNFAPGVKYMDAIIKATKDIHIPIVFCNAGFMVTGFLDQAPIEKLLANIECNATSAVNVSHHFVKILVQNKQKGCIVFTSSVAGFIPTPFAAMYASTKAFVSQFAACLHIEVKPLGIDVCAIHPSPVASNFYHKLDHKVDMIEAAAKSAVTPESVTNDMLRSIGPCALRDMGGLAWGTRMGTFFLPYNFFAEVFAFFAPFLPDWKTHNQHR 329          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|1210515902|dbj|GAX25171.1| (hypothetical protein FisN_16Hh008 [Fistulifera solaris])

HSP 1 Score: 330.872 bits (847), Expect = 1.169e-109
Identity = 162/300 (54.00%), Postives = 214/300 (71.33%), Query Frame = 0
Query:   23 AAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEK-THQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            A PT+ W   Y +P I+M      +LKKKY A+WALVTGG SGIG+A+   LA QGLNV VVS+DDD LK T++EL+  FPKQEFR+VGV FAPG  Y+  +I ATKDI + I+F NAG+++TGF D  P+EK LAN+ECNAT+AV ++HHF++ L+Q K  GCIVFTSSV+G++P+PF++MY +TKAF+SQFAACL +EVK  GIDV ++HPSPVAS FY K  H+++M++   K+AV P+ + + +   IG C   D G  A   R GT  L YN   + FA  A  LPD+  +N+ R
Sbjct:   30 AFPTLFWFVAYLIPQIYMAFRPVPNLKKKYAAEWALVTGGGSGIGKALCFALAQQGLNVVVVSLDDDFLKTTMQELKRQFPKQEFRSVGVNFAPGVKYMDAVIKATKDIHIPIVFCNAGFMVTGFLDQAPIEKLLANIECNATSAVNVSHHFVKILVQNKQKGCIVFTSSVAGFIPTPFAAMYASTKAFVSQFAACLHIEVKPLGIDVCAIHPSPVASNFYHKLDHKVDMIEAAAKSAVTPESVTNDMLRSIGPCALRDMGGLAWGTRMGTFFLPYNFFAEVFAFFAPFLPDWKTHNQHR 329          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|1072230583|gb|OEU15316.1| (NAD(P)-binding protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 328.946 bits (842), Expect = 1.927e-109
Identity = 163/276 (59.06%), Postives = 200/276 (72.46%), Query Frame = 0
Query:   47 DLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEK-THQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            DLKK+YNA W+LVTGG SGIG+A+  +LA QGLNV VVS+DDD LK T+K+L+  FP  EFR+VG  F+PG  YL +I  ATKDI++ IIFNNAG+++TGFFD  PL K LANVECNATAAV ITHHF+ KL+  K  GC+VFTSSV+G++P+PFS MYGATKAF SQ A  L +E+KS GIDV +VHPSPV+S FY    H++E+L+   K AV P++LP  IF  IG C   D G  AV  R GT  L YN   + FA  A  LPD+  +NK R
Sbjct:    8 DLKKRYNATWSLVTGGGSGIGKALSFKLARQGLNVVVVSLDDDFLKATMKQLKETFPDLEFRSVGCAFSPGVDYLKQINEATKDIEIPIIFNNAGFLVTGFFDQAPLGKLLANVECNATAAVNITHHFVSKLVSSKKKGCVVFTSSVAGFIPTPFSGMYGATKAFCSQLACSLHIELKSLGIDVCAVHPSPVSSNFYNDLDHKIEILESACKAAVPPEDLPDDIFRSIGACALRDLGGMAVSSRMGTFFLPYNFFTEMFATAAPYLPDWKTHNKTR 283          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|219112727|ref|XP_002178115.1| (short-chain dehydrogenase/reductase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411000|gb|EEC50929.1| short-chain dehydrogenase/reductase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 330.102 bits (845), Expect = 2.455e-109
Identity = 163/310 (52.58%), Postives = 221/310 (71.29%), Query Frame = 0
Query:   14 PVFLILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEK-THQMEMLDMVKKTAVAPDE-LPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            P+ ++ +  A PTV W   Y +P ++M +    DLKK+YNA+WALVTGG SGIG+A+  +LA QGLN+ +VS+DD+ LK+T++EL   +PKQ FRA GV F+PG  Y+ KI +ATKDIDV I+FNNAG+++TGF D  P+ K LAN+ECNATA+V I+H F+QKL+ KK  GCIVFTSSV+G++P+PF++MY +TKAF+SQFAACL +EV+S GIDV ++HPSPV S+FY    H+++M++    +AV+PDE L   +   IG C   D G  A   R GT  L YN     FA  A  +PD+  +NK R
Sbjct:   20 PLTILAMIFAFPTVFWFVAYLIPQLYMVVRPVPDLKKRYNAEWALVTGGGSGIGKALAFKLASQGLNIVIVSLDDNFLKSTMRELAEMYPKQSFRAAGVTFSPGVDYMAKINAATKDIDVPIVFNNAGFMVTGFLDQTPIGKLLANIECNATASVNISHFFVQKLVAKKAKGCIVFTSSVAGFIPTPFAAMYASTKAFVSQFAACLHIEVQSLGIDVCAIHPSPVKSQFYTNLDHKVDMIEKAATSAVSPDEKLADTMLKSIGVCALRDMGGLAWGTRMGTFFLPYNFFAVAFANAAPFMPDWKTHNKHR 329          
BLAST of EWM24489.1 vs. NCBI_GenBank
Match: gi|397630644|gb|EJK69853.1| (hypothetical protein THAOC_08851 [Thalassiosira oceanica])

HSP 1 Score: 328.946 bits (842), Expect = 1.088e-108
Identity = 165/305 (54.10%), Postives = 211/305 (69.18%), Query Frame = 0
Query:   18 ILLAIAAPTVVWSFTYFLPLIFMKLLGPQDLKKKYNAQWALVTGGSSGIGRAIVDRLAMQGLNVCVVSMDDDLLKNTVKELQSAFPKQEFRAVGVLFAPGQAYLPKIISATKDIDVQIIFNNAGYILTGFFDSQPLEKQLANVECNATAAVGITHHFLQKLIQKKLPGCIVFTSSVSGYMPSPFSSMYGATKAFLSQFAACLAVEVKSRGIDVMSVHPSPVASRFYEKT-HQMEMLDMVKKTAVAPDELPSQIFSGIGRCHWYDQGTFAVLVRAGTAPLAYNAMVQGFAAIAHCLPDFIKYNKER 321
            ++  +A  +  W  TY LP I+M +    DLKK+Y+A+WALVTG  SGIGR+I  +LA QGLNV +VS+DD  L  TVKEL+  +PKQ+FR VG  F+PG  Y+  I  ATKDIDV+I+FNNAG+I+TGF D   L K LANVECN+TAA  I HHFLQKL+  K  GCIVFTSSV+G++P+PF++ Y ATK+F+SQ A  L +EV++ GIDV +VHPSPVAS FYEK  H++E+++   K A  PD LP+ IF  IG C   D G+ AV  R GT  + YN     F A A  LPD+  +NK R
Sbjct:   32 VIYLLAFLSAFWIVTYALPQIYMAIRPVPDLKKRYDAEWALVTGSGSGIGRSICFKLASQGLNVVLVSIDDQHLAKTVKELRQRYPKQQFRTVGCTFSPGVNYIAAIEEATKDIDVKIVFNNAGFIVTGFTDQTILPKLLANVECNSTAAFVIAHHFLQKLVANKQKGCIVFTSSVAGFIPTPFAASYAATKSFVSQLACSLHIEVQALGIDVCAVHPSPVASNFYEKVDHKIEIMEAACKNAAEPDALPNDIFRSIGCCALRDLGSMAVGTRMGTFFIPYNLFACAFTAAAPFLPDYKVHNKSR 336          
The following BLAST results are available for this feature:
BLAST of EWM24489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105970|gb|EWM24489.1|0.000e+0100.00short-chain dehydrogenase reductase [Nannochlorops... [more]
gi|553192919|ref|XP_005855670.1|0.000e+082.37short-chain dehydrogenase reductase [Nannochlorops... [more]
gi|585105971|gb|EWM24490.1|0.000e+0100.00short-chain dehydrogenase reductase [Nannochlorops... [more]
gi|676389129|ref|XP_009037843.1|4.821e-12357.37hypothetical protein AURANDRAFT_27825 [Aureococcus... [more]
gi|298706063|emb|CBJ29173.1|6.287e-12055.81conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210514714|dbj|GAX26193.1|1.555e-11054.67hypothetical protein FisN_16Lh008 [Fistulifera sol... [more]
gi|1210515902|dbj|GAX25171.1|1.169e-10954.00hypothetical protein FisN_16Hh008 [Fistulifera sol... [more]
gi|1072230583|gb|OEU15316.1|1.927e-10959.06NAD(P)-binding protein [Fragilariopsis cylindrus C... [more]
gi|219112727|ref|XP_002178115.1|2.455e-10952.58short-chain dehydrogenase/reductase [Phaeodactylum... [more]
gi|397630644|gb|EJK69853.1|1.088e-10854.10hypothetical protein THAOC_08851 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6198rna6198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications