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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100062g6.925.mrna |
Orig protein id | gnl|cribi|Naga_100062g6.925 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002467.1 | supercontig | CM002467.1:544990..546031 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6090 ID=rna6090|Name=rna6090|organism=Nannochloropsis gaditana|type=mRNA|length=1002bp ATGGATCAGTCGACAAGAAGAAAACCAAGGCCAGGCCTGAAGACAAGTGC TGAGGCTTTCTTCACGACAACCGCTTCAACCGCCACGCAGAGGGAGAATC CTGCCGCCGCCTCCAGCACCAGCAAATCATCAGGATGGAAAGACAGGCTC AAAGAACGATGCTTAAACCACGTGCATCGGGAGCGGGGCCGGTTGATTCA AGAGCTTCGAGGCCTGAAATCCCCACCTCCTCGTGCCCTGTCCTCGCACG TTCCGTCAGAACCCCTTCCGTCCTCAACACTTTCTCCATCGCTTGCACTA TTGCGGCCCTCAGAGAGCTCCAGTCCATCGCTTTGTTTTAATCCATCGTT AATGGGAAGCACGGTCATGTCTATATTACAGAGTGAAATGAGGGTTGTCC GTATGTCCTGCGAGGAAGGGCAGGCCCACGGCGCCGATGGAAAGCTAAAT GATGATGGCATCAATGGTTTCAGGCATGGAGAGAATGAGGATCAATCATT CGAGCCACGTTATCCACCACGTCCCATTTTCGCATCGAACCAAGGCCATG CGACCCCGCCATCGGGATCTTGGTTGAAGGAAGGCGGGTCTCCGATATCA CGGTCGGTGGCAGAAGAAGAAGACCGTGCGACCACTGAATACGAAGCGGG AGGATTGGAAGATCTCTCAGAGATGGAGCAACTCGAGCTTATGCGCTGCA TCGAAGAAGCGCTGGAGGCGGAAGTCATGGCGGCAGATGCGGAGGCGTTG GAAGAGTACTCGCAGTTAGAAAGCTCCGATATCGAGGCCTCAGTGCAGGC GCTATACGATTGTCACACCCTCTCACACGACGACATCGCCGTCCTCTGCC CTTGTTGCAAGTCTAATTTCCTGCTTAATCACAACGAGGACATAGCTTGT GCTTGCGGCTTAAGGGGTCGGGAACAGTGGCCGGTAGCTTGGGCTCATGA GGTCCGCGTCGCTTTCATTGTCAAGAGATTCGCCTCGGGCGAGGTTGTGT AA back to topprotein sequence of rna6090 >rna6090-protein ID=rna6090-protein|Name=rna6090|organism=Nannochloropsis gaditana|type=polypeptide|length=271bp MFGIFDKLNLFHGGAAVGSHPKLSLLSSFPSTCPLDAPAPKDEGMEKEDV TDLPLFQEGMSLLVKLRGILSVDEEESDWQDHVEEEAETKAPFDKAQARP MSGPERGESRRETFDQLQASMAPGDYSPCGPSVSENSPLRLLGHEPFRPR SAASLGITSPELKAMRLRKTRRRTRDQQRQDECLRAPEAGAALLQSKGPQ SIQDEGKTDNPAHYPAGLRLQRNAAQSEIQDVNVEPSATHSVPSLASPDP HKRARRSLRGSARRSTRGSLV back to topmRNA from alignment at CM002467.1:544990..546031- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6090 ID=rna6090|Name=rna6090|organism=Nannochloropsis gaditana|type=mRNA|length=1042bp|location=Sequence derived from alignment at CM002467.1:544990..546031- (Nannochloropsis gaditana) AATGAGCACACTACTTGATGGGAGCTAACGTAACATTTTCTCACACGAAC
ACAGTTGTAAAGCATTACCACTATGTTTGGCATCTTTGACAAATTGAACC
TCTTCCATGGTGGCGCCGCTGTAGGGAGTCACCCTAAATTATCGTTGTTG
TCCTCATTCCCAAGTACTTGTCCACTGGACGCTCCCGCCCCCAAGGACGA
AGGAATGGAAAAAGAAGACGTGACTGACCTGCCGCTCTTTCAGGAGGGAA
TGAGCCTGCTTGTAAAACTACGAGGAATACTTAGTGTGGACGAGGAGGAG
AGTGACTGGCAAGACCATGTTGAGGAGGAGGCAGAGACAAAAGCACCCTT
TGACAAGGCCCAGGCACGGCCCATGTCCGGTCCAGAGCGCGGCGAAAGTC
GGCGTGAGACGTTCGATCAGCTCCAAGCTAGTATGGCTCCTGGTGATTAT
TCTCCTTGTGGTCCTTCGGTAAGTGAAAATTCCCCCCTTAGACTTCTCGG
GCACGAACCATTCCGTCCTCGGTCTGCGGCCTCGCTAGGGATTACTTCGC
CTGAGCTCAAAGCAATGAGGCTGCGCAAAACTCGACGTCGCACTCGCGAT
CAGCAGCGTCAAGATGAATGCTTGCGAGCGCCGGAAGCCGGTGCGGCTCT
ACTCCAGTCCAAGGGGCCGCAGTCCATCCAGGACGAAGGGAAAACAGACA
ACCCCGCGCATTACCCTGCGGGCTTGAGATTGCAGAGAAATGCGGCCCAA
AGCGAGATTCAAGATGTCAATGTTGAGCCCTCTGCCACTCATTCAGTTCC
AAGTCTCGCCTCGCCAGACCCTCACAAACGTGCCCGCCGCTCCTTGCGGG
GCTCTGCTCGCCGCAGCACGAGAGGGAGCCTCGTGTAGAGTGGAGGAAGA
TCGGGAAGGATTTGTTTCTTCACTCATCACGTTTGCAGAGCCGTAATTAA
AAAAAAGGGAACAGGGAGGGGCAATCACGTGCCGAGACACCGCTTTCCGT
ACGAGCGAAAGGAAGTCCTTCATTCGACGTTCGGTGGTACTT back to topCoding sequence (CDS) from alignment at CM002467.1:544990..546031- >rna6090 ID=rna6090|Name=rna6090|organism=Nannochloropsis gaditana|type=CDS|length=816bp|location=Sequence derived from alignment at CM002467.1:544990..546031- (Nannochloropsis gaditana) ATGTTTGGCATCTTTGACAAATTGAACCTCTTCCATGGTGGCGCCGCTGT AGGGAGTCACCCTAAATTATCGTTGTTGTCCTCATTCCCAAGTACTTGTC CACTGGACGCTCCCGCCCCCAAGGACGAAGGAATGGAAAAAGAAGACGTG ACTGACCTGCCGCTCTTTCAGGAGGGAATGAGCCTGCTTGTAAAACTACG AGGAATACTTAGTGTGGACGAGGAGGAGAGTGACTGGCAAGACCATGTTG AGGAGGAGGCAGAGACAAAAGCACCCTTTGACAAGGCCCAGGCACGGCCC ATGTCCGGTCCAGAGCGCGGCGAAAGTCGGCGTGAGACGTTCGATCAGCT CCAAGCTAGTATGGCTCCTGGTGATTATTCTCCTTGTGGTCCTTCGGTAA GTGAAAATTCCCCCCTTAGACTTCTCGGGCACGAACCATTCCGTCCTCGG TCTGCGGCCTCGCTAGGGATTACTTCGCCTGAGCTCAAAGCAATGAGGCT GCGCAAAACTCGACGTCGCACTCGCGATCAGCAGCGTCAAGATGAATGCT TGCGAGCGCCGGAAGCCGGTGCGGCTCTACTCCAGTCCAAGGGGCCGCAG TCCATCCAGGACGAAGGGAAAACAGACAACCCCGCGCATTACCCTGCGGG CTTGAGATTGCAGAGAAATGCGGCCCAAAGCGAGATTCAAGATGTCAATG TTGAGCCCTCTGCCACTCATTCAGTTCCAAGTCTCGCCTCGCCAGACCCT CACAAACGTGCCCGCCGCTCCTTGCGGGGCTCTGCTCGCCGCAGCACGAG AGGGAGCCTCGTGTAG back to top
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