EWM24775.1, cds5898 (CDS) Nannochloropsis gaditana

Overview
NameEWM24775.1
Unique Namecds5898
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:69417..69511 -
Alignment locationCM002467.1:68999..69296 -
Alignment locationCM002467.1:68301..68822 -

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Properties
Property NameValue
Start range68301
Start range.
Protein idEWM24775.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102058g1.4026.mrna
GbkeyCDS
End range.
End range69511
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:69417..69511 -
CM002467.1supercontigCM002467.1:68999..69296 -
CM002467.1supercontigCM002467.1:68301..68822 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24775.1 vs. NCBI_GenBank
Match: gi|585106344|gb|EWM24775.1| (hypothetical protein Naga_102058g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 
Query:    1 GGREGGREGGRVVMPRDEVVLEAFPCVRMMNRDEGLPQGEREGRGGRGGTRGGSDGNGGGRGRGVLLLTSHRLLLFPYAPPTSLWMEGDEARMQMETGGSRDRRRGGRGGGGGGGGRKGGERTMSVPLPWQIPLASIQHLTILPSRFISPSPSRRPGPWRKAEGKREGGRGERGRGGGGGGGKREDGRKGVKGEREDRLEVHSNQWSHPIPAPPSSPPSASGPSLPSSFPPPSSLIGSDKEEEDQRPPLAILEVSSKEYRRPKCIFFFHSVDLLESMMDLEVREKEREGEEAAGDKKEGVEDVVR 305
            GGREGGREGGRVVMPRDEVVLEAFPCVRMMNRDEGLPQGEREGRGGRGGTRGGSDGNGGGRGRGVLLLTSHRLLLFPYAPPTSLWMEGDEARMQMETGGSRDRRRGGRGGGGGGGGRKGGERTMSVPLPWQIPLASIQHLTILPSRFISPSPSRRPGPWRKAEGKREGGRGERGRGGGGGGGKREDGRKGVKGEREDRLEVHSNQWSHPIPAPPSSPPSASGPSLPSSFPPPSSLIGSDKEEEDQRPPLAILEVSSKEYRRPKCIFFFHSVDLLESMMDLEVREKEREGEEAAGDKKEGVEDVVR
Sbjct:    1 GGREGGREGGRVVMPRDEVVLEAFPCVRMMNRDEGLPQGEREGRGGRGGTRGGSDGNGGGRGRGVLLLTSHRLLLFPYAPPTSLWMEGDEARMQMETGGSRDRRRGGRGGGGGGGGRKGGERTMSVPLPWQIPLASIQHLTILPSRFISPSPSRRPGPWRKAEGKREGGRGERGRGGGGGGGKREDGRKGVKGEREDRLEVHSNQWSHPIPAPPSSPPSASGPSLPSSFPPPSSLIGSDKEEEDQRPPLAILEVSSKEYRRPKCIFFFHSVDLLESMMDLEVREKEREGEEAAGDKKEGVEDVVR 305
The following BLAST results are available for this feature:
BLAST of EWM24775.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585106344|gb|EWM24775.1|0.000e+0100.00hypothetical protein Naga_102058g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5913rna5913Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications