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Properties
| Property Name | Value |
|---|
| Product | uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100092g2.2143.mrna |
| Orig protein id | gnl|cribi|Naga_100092g2.2143 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:775912..777612 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5763 ID=rna5763|Name=rna5763|organism=Nannochloropsis gaditana|type=mRNA|length=1373bp
TTAGCGTGGGTGTCTCCTCACATCGTCCATCTTCCCGCCCGATCAACCCC
TTTCCACCAGGCACGGGGCAGGCACCGTCAGGAAGATGAAGCTCCGGCCA
ATAGTCTCCGATAGAATTTTCAGGCATTTATTGCTGACCTTGGTTCTCCT
TGCCTCCCTTTTACCCGGCATCGCCTTTTCCTTCAAATTGGGCATCATCC
CTTCGGGCCCTAGTTCCCCCCACCCTATCAGTGTAACGCGGTCCCCGCGA
ACCGCCGTGGCCTCGACCACCGCCAGCACAGACACTGGCACCCTCACCAG
CAATAGTCATGTTCAAACGAAAAAGAGACGTCGTGAGAAGGCCACCGGGC
TCGGCAAGATCAGGCCTGTTTTACATGCACTGCAACAGACGGCCTCACGA
GCGGCCCCGCCCGGCTCCACGCGTCGCAGTCTCGTCAAAAAGTTTGCCCG
AGGGGTACTTTTCCTCCCCCCGCTTTTTTTAGGCGGTGCTCTCAACATCG
CTGCTCCTTCTGGTGCGATGGCCATTGCACCGGCTGGTGTGGCAGCTGTA
GACAAGACTCCTGGCAGATACAAAAACGTCGCGATGGGATCCATGGTCGA
ACCTCGGCCACGCAGTGCGTCAGGCGTGGACGAGCGGGTCAAGCAGGAAG
TCCTGCAAACTACTCAAGAATGGCTTCAGACGGTCACCTCGAACCGCGCA
ACGGCTTCGGCGGAAACGGCCGCCTTGTATGCTTCGGACGCCGTGTTGTG
GGGAACGGTTTCGGAGGAACTTCGGGTCAATCCCGCGGAAATTCGGTCGT
ATTTTGATTTTTTTGCCGCACTCCCTGGATTGAGGGTGGCAGCCTATCAA
CCTTACGTAAGGATATTCGGAACGGGAAATGAAGGAGAGACCGCCATCAA
CGACGGGTACTACGTCTTTGCGTGGCGGGGCCCGGACGGCCGTGAGGTGC
AGAAGCACGCACGGTATTCGTTTGTGTACCGGAAAGAGGGGGGAAAATGG
ATGATTGTTGACCACCACTCATCCTTGTTGCCGACTGCTCCTGCAGGGCT
TGCGAAGGCGACGACGGTGGTGATGTGATGGGAGGAAGACCAGGCGGGGG
CCCAACAAAGACGAGAAGGAGGGAAAAACTCGGCGCACAAAATGCCGAGG
ATGGATTAATTGTTGTCATGGCGAGACATAAATAGTATATGGAGTTGAAT
TTTGGTGAAGTGTAGATGTGTACCATAAGGGTGGGATGCGGAGAACGATA
TCGGAATAAGGATGGAAGGGGAGGTTGAGCCCCGTGTGCATAAACGTTGT
GGTAGAGTTTATCTCCCGTACGACGCAAAACAAACTTCGGCGCGTGGCTA
CCCCACACACCATTTTCATCCCA back to topprotein sequence of rna5763 >rna5763-protein ID=rna5763-protein|Name=rna5763|organism=Nannochloropsis gaditana|type=polypeptide|length=186bp
MAIAPAGVAAVDKTPGRYKNVAMGSMVEPRPRSASGVDERVKQEVLQTTQ
EWLQTVTSNRATASAETAALYASDAVLWGTVSEELRVNPAEIRSYFDFFA
ALPGLRVAAYQPYVRIFGTGNEGETAINDGYYVFAWRGPDGREVQKHARY
SFVYRKEGGKWMIVDHHSSLLPTAPAGLAKATTVVM back to topmRNA from alignment at CM002466.1:775912..777612- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5763 ID=rna5763|Name=rna5763|organism=Nannochloropsis gaditana|type=mRNA|length=1701bp|location=Sequence derived from alignment at CM002466.1:775912..777612- (Nannochloropsis gaditana)
TTAGCGTGGGTGTCTCCTCACATCGTCCATCTTCCCGCCCGATCAACCCC
TTTCCACCAGGCACGGGGCAGGCACCGTCAGGAAGATGAAGCTCCGGCCA
ATAGTCTCCGATAGAATTTTCAGGCATTTATTGCTGACCTTGGTTCTCCT
TGCCTCCCTTTTACCCGGCATCGCCTTTTCCTTCAAATTGGGCATCATCC
CTTCGGGCCCTAGGTACGCGAAAAGCATCTGAATCAGTCTCGACATACGC
CATCATTTTATATCATTTTGATTGGAGTGTCAATCTTCTTTGTGCATCTT
GATGCGCTTTCCAACAGTATAGGGATATTGACAAATCTGTCTGTCGATCA
ACCAGATTTCTACCTTAGTAAGACACACATGCTCTTCCTTCTCGAAGCCT
TCCCACTTTACCCTTCCAGTAACCTCTCTCTTGATGCGCCATCGCGTGGT
GCTTTGGAGCGTCTCGGATTCCAAGTCCTTCGCGTTTGGAACCTCGAACA
TCCCTGACGCACTTCTCCTCTCCAATTGTCCGTAAAATCAGTTCCCCCCA
CCCTATCAGTGTAACGCGGTCCCCGCGAACCGCCGTGGCCTCGACCACCG
CCAGCACAGACACTGGCACCCTCACCAGCAATAGTCATGTTCAAACGAAA
AAGAGACGTCGTGAGAAGGCCACCGGGCTCGGCAAGATCAGGCCTGTTTT
ACATGCACTGCAACAGACGGCCTCACGAGCGGCCCCGCCCGGCTCCACGC
GTCGCAGTCTCGTCAAAAAGTTTGCCCGAGGGGTACTTTTCCTCCCCCCG
CTTTTTTTAGGCGGTGCTCTCAACATCGCTGCTCCTTCTGGTGCGATGGC
CATTGCACCGGCTGGTGTGGCAGCTGTAGACAAGACTCCTGGCAGATACA
AAAACGTCGCGATGGGATCCATGGTCGAACCTCGGCCACGCAGTGCGTCA
GGCGTGGACGAGCGGGTCAAGCAGGAAGTCCTGCAAACTACTCAAGAATG
GCTTCAGACGGTCACCTCGAACCGCGCAACGGCTTCGGCGGAAACGGCCG
CCTTGTATGCTTCGGACGCCGTGTTGTGGGGAACGGTTTCGGAGGAACTT
CGGGTCAATCCCGCGGAAATTCGGTCGTATTTTGATTTTTTTGCCGCACT
CCCTGGATTGAGGGTGGCAGCCTATCAACCTTACGTAAGGATATTCGGAA
CGGGAAATGAAGGAGAGACCGCCATCAACGACGGGTACTACGTCTTTGCG
TGGCGGGGCCCGGACGGCCGTGAGGTGCAGAAGCACGCACGGTATTCGTT
TGTGTACCGGAAAGAGGGGGGAAAATGGATGATTGTTGACCACCACTCAT
CCTTGTTGCCGACTGCTCCTGCAGGGCTTGCGAAGGCGACGACGGTGGTG
ATGTGATGGGAGGAAGACCAGGCGGGGGCCCAACAAAGACGAGAAGGAGG
GAAAAACTCGGCGCACAAAATGCCGAGGATGGATTAATTGTTGTCATGGC
GAGACATAAATAGTATATGGAGTTGAATTTTGGTGAAGTGTAGATGTGTA
CCATAAGGGTGGGATGCGGAGAACGATATCGGAATAAGGATGGAAGGGGA
GGTTGAGCCCCGTGTGCATAAACGTTGTGGTAGAGTTTATCTCCCGTACG
ACGCAAAACAAACTTCGGCGCGTGGCTACCCCACACACCATTTTCATCCC
A back to topCoding sequence (CDS) from alignment at CM002466.1:775912..777612- >rna5763 ID=rna5763|Name=rna5763|organism=Nannochloropsis gaditana|type=CDS|length=561bp|location=Sequence derived from alignment at CM002466.1:775912..777612- (Nannochloropsis gaditana)
ATGGCCATTGCACCGGCTGGTGTGGCAGCTGTAGACAAGACTCCTGGCAG
ATACAAAAACGTCGCGATGGGATCCATGGTCGAACCTCGGCCACGCAGTG
CGTCAGGCGTGGACGAGCGGGTCAAGCAGGAAGTCCTGCAAACTACTCAA
GAATGGCTTCAGACGGTCACCTCGAACCGCGCAACGGCTTCGGCGGAAAC
GGCCGCCTTGTATGCTTCGGACGCCGTGTTGTGGGGAACGGTTTCGGAGG
AACTTCGGGTCAATCCCGCGGAAATTCGGTCGTATTTTGATTTTTTTGCC
GCACTCCCTGGATTGAGGGTGGCAGCCTATCAACCTTACGTAAGGATATT
CGGAACGGGAAATGAAGGAGAGACCGCCATCAACGACGGGTACTACGTCT
TTGCGTGGCGGGGCCCGGACGGCCGTGAGGTGCAGAAGCACGCACGGTAT
TCGTTTGTGTACCGGAAAGAGGGGGGAAAATGGATGATTGTTGACCACCA
CTCATCCTTGTTGCCGACTGCTCCTGCAGGGCTTGCGAAGGCGACGACGG
TGGTGATGTGA back to top
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