EWM24953.1, cds5716 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|585106584|gb|EWM24953.1| (hypothetical protein Naga_100148g10 [Nannochloropsis gaditana]) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 MRGGVKCGIVAVGITRGRLRDLCRRNDSTRALLSVHCSLTSPLLHVHRRWTQHQMFHDGPRDKDRLSENMSKPPEHSGSQSTVPPSDATDADDRGCTEAGVIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEEG 396
MRGGVKCGIVAVGITRGRLRDLCRRNDSTRALLSVHCSLTSPLLHVHRRWTQHQMFHDGPRDKDRLSENMSKPPEHSGSQSTVPPSDATDADDRGCTEAGVIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEEG
Sbjct: 1 MRGGVKCGIVAVGITRGRLRDLCRRNDSTRALLSVHCSLTSPLLHVHRRWTQHQMFHDGPRDKDRLSENMSKPPEHSGSQSTVPPSDATDADDRGCTEAGVIRAAVRSSINIYRSILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRVLRCAGEEEG 396
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|1173950790|gb|OQR98734.1| (hypothetical protein THRCLA_06683, partial [Thraustotheca clavata]) HSP 1 Score: 105.916 bits (263), Expect = 2.030e-22 Identity = 90/311 (28.94%), Postives = 145/311 (46.62%), Query Frame = 0
Query: 86 SDATDADDRGCTEAGVIRAAVRSSINIYR--SILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINA--QHVVANVWTGTALAHSLAHASLFGSFEVLKDALL-AITHARHEEPLGVFVVGA----AGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRV 387
SD ++ D G +R+A+R+ + R + + GSFPR VP KTV+ +D +S D G KEA ++ Q P+ K S L L + VP++V+S LG+A + YE + L ++ V +F S LI+GG+AG+ HG L W + +L+ + Q G L+H+ H ++F S+E K LL I H E V G+ + ++GL+ E +SH +E+ + + K G P L++++ +A T LG+LA+EY + V
Sbjct: 14 SDPNNSSDAAV--GGAMRSALRTLVTKLRLQNPIVGSFPRTVPSKTVASASDNLSFLMD----ITGYVKEAKEQLDQQKSPKAKVS---------TLTKWALWTWVPNIVRSSILGSATWASYEMTTSALQPSIAPQNMV--AYTFGVS-------------LIAGGVAGSLHGSL---WSTSEKLLASIKQSAFGYRILGILLSHTSTHIAMFSSYEGTKAMLLDTIVPVEHREDPSVVETGSCILISAAVSGLIGEVMSHYIAPFEQNTMKEALSEIKTLGRPTLQLMAPSAFSTMLGWLAYEYAKDLV 291
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|669161028|ref|XP_008616076.1| (hypothetical protein SDRG_11800 [Saprolegnia diclina VS20] >gi|530732241|gb|EQC30483.1| hypothetical protein SDRG_11800 [Saprolegnia diclina VS20]) HSP 1 Score: 99.7525 bits (247), Expect = 3.560e-20 Identity = 88/303 (29.04%), Postives = 142/303 (46.86%), Query Frame = 0
Query: 100 GVIRAAVRSSINIYR--SILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALL-AITHARHEEPLGVFVVG----AAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGL---PRLRVISSAALPTSLGFLAWEYGRHRVLRCAG 392
G +R+ +RS + R + + GSFPR VP+K V+ +D +S D G KEA ++ PQ K A L + + VP++V+S LG+A + YE + + L + T ++V + + G+ L++GG+AG HG L+ E I Q G L+H+ H ++F S+E K LL ++ + H+E V G AA +GLV E V+H +E+ + RA+ K P LR ++ +A T LG+LA+E+ + V +G
Sbjct: 23 GAMRSGLRSMVMRLRLQNPIVGSFPRTVPVKAVASASDNLSLLMD----VTGYVKEAKEQLDQHRSPQAK---------VATLTKWAMWTWVPNLVRSSLLGSATWASYELTTNALTPS-------------QTPQNVVACT-FGV-ALVAGGVAGALHGSLWTATEELLVRIK-QTASGYSLRGVLLSHTTTHVAMFSSYEATKATLLESVVPSEHKEDRSAVVTGACIVAAAATSGLVGEVVTHYIAPFEQ---APFRASVKEAAALARPTLRGMAPSAFSTLLGWLAYEFAKDMVDDASG 293
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|813184979|ref|XP_012206661.1| (hypothetical protein SPRG_12283 [Saprolegnia parasitica CBS 223.65] >gi|641528427|gb|KDO22654.1| hypothetical protein SPRG_12283 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 97.0561 bits (240), Expect = 2.725e-19 Identity = 87/298 (29.19%), Postives = 140/298 (46.98%), Query Frame = 0
Query: 100 GVIRAAVRSSINIYR--SILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALL-AITHARHEEPLGVFVVG----AAGGLAGLVEETVSHLTPHWEKEGVS-SLR--AAFKRNGLPRLRVISSAALPTSLGFLAWEYGRHRV 387
G +R+ +RS + R + + GSFPR VP+K V+ +D +S D G KEA ++ PQ K A L + + VP++V+S LG+A + YE S + L + T ++V + + G+ L++GG+AG HG L+ E I G L+H+ H ++F ++E K LL ++ + H+E V G AA +GLV E +H +E+ + SL+ AA R P LR ++ +A T LG+LA+E+ + V
Sbjct: 16 GAMRSGLRSMVMRLRLQNPIVGSFPRTVPVKAVASASDNLSLLMD----VTGYVKEAKEQLDQHRSPQAK---------VATLTKWAMWTWVPNLVRSSLLGSATWASYELSTNALTPS-------------QTPQNVVACT-FGV-ALVAGGVAGALHGSLWTATEELLMRIKQTATSGYNLRGVLLSHTTTHVAMFSTYEGTKATLLESVVPSEHKEDRSAVVTGACIVAAAATSGLVGEVATHYIAPFEQAPFNESLKEAAALAR---PTLRGMAPSAFSTLLGWLAYEFAKDMV 282
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|1173949903|gb|OQR97899.1| (hypothetical protein ACHHYP_09678 [Achlya hypogyna]) HSP 1 Score: 88.5817 bits (218), Expect = 3.570e-16 Identity = 83/292 (28.42%), Postives = 135/292 (46.23%), Query Frame = 0
Query: 100 GVIRAAVRSSINIYR--SILFGSFPRRVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGITGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLA-ITHARHEEPLGVFVVG----AAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGR 384
G +R+A+RS + R + + GSFPR VP+K V+ +D +S D G KEA ++ P+ K S L + + VP++++S LG+A + YE + L L ++ +++ G+ L++GG+AG+ HG L+ EH + Q G L+H+ H ++F ++E K LL I H+E V G AA +GLV E V+H +E+ V A P LR ++ +A T LG+LA+E+ +
Sbjct: 21 GAMRSALRSLVMRIRLQNPIVGSFPRTVPVKAVASASDNLSFLMDV----SGYVKEAKEQLDQHRSPRAKVS---------SLTKWAVWTWVPNILRSSLLGSATWASYEMATTAL-----LPQEPQHVIAYT----------FGV-ALVAGGVAGSLHGSLWSASEHLISRLK-QTSYGYHLPGVLLSHTTTHMAMFSAYEGTKATLLEFIVPVEHKEDRSEVVTGTCIVAAAATSGLVGEVVTHYIAPFEQVRVKDALAEAAALARPSLRGMAPSAFSTMLGWLAYEFAK 282
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|698789600|ref|XP_009827832.1| (hypothetical protein H257_04880 [Aphanomyces astaci] >gi|574116680|gb|ETV82163.1| hypothetical protein H257_04880 [Aphanomyces astaci]) HSP 1 Score: 85.8853 bits (211), Expect = 3.160e-15 Identity = 82/305 (26.89%), Postives = 135/305 (44.26%), Query Frame = 0
Query: 87 DATDADDRGCTEA--GVIRAAVRSSINIYR--SILFGSFPR--RVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGI-TGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGR 384
DA D DD A G +R A+R++I R + + GSFPR +VP K V+ +D +S D G KEA I + + K +L + VP++V+S LG+ + YE + L V + ST+ D+ +L +++G +AG+ HG L+ E A + G +H+ H ++F S+E K L+ H + G + A +GLV E +H +E + ++ R + LP LR ++ + L T LG+LA+E+ +
Sbjct: 12 DAEDDDDSSGEAALGGAMRNALRTAITRIRLQNPIVGSFPRTTKVPTKAVASASDNLSFLMD----VTGYVKEAKDQIAEKTSSKAK---------AVKLAHWATTTWVPNLVRSTILGSVTWTSYEVTTAHL---------VATSPALSTASDLQTLLPWAFGVSVVAGTVAGSLHGTLWSVSETALARFKREASSPFRVRGVLFSHTSTHLAMFASYETTKTFLMHQVEGDHTDVQGAACIVGAAAASGLVGELATHFAAPFEHQSFAAARQELRTLPLPSLRSMAPSGLSTMLGWLAYEFAK 294
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|673026138|ref|XP_008867030.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574477077|gb|ETW04074.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 82.8037 bits (203), Expect = 3.909e-14 Identity = 76/310 (24.52%), Postives = 134/310 (43.23%), Query Frame = 0
Query: 88 ATDADDRG-CTEAGVIRAAVRSSINIYR--SILFGSFPR--RVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGI-------TGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGRH 385
A DA + G G +R A+R+++ R + + GSFPR +VP K V+ +D +S D G KEA I + + K +L + +P++V+S LG+ + YE + +L +TS + + I +++G +AG+ HG L+ E A + + G L+H+L H ++F S+E K L+ H + G + A +GLV E ++ +E++ ++ + LP LR ++ + T LG+LA+EY +
Sbjct: 16 ADDAPEHGEAALGGAMRNALRTAVTRIRLQNPIVGSFPRTPKVPTKAVATASDNLSFLMD----VTGYMKEAKEQIAEKTSSKAK---------AVKLVQWATTTWMPNLVRSTILGSVTWTSYEVTTASL---------------LATSPSTIASPHVAILVPWVFGVSIVAGTVAGSLHGSLWSVSERAMAAFKHEPSAFRI-PGVLLSHTLTHLAMFSSYEATKAFLMHDIEGDHTDIDGALCIVGAAATSGLVGEIATYYAAPFEQQSFTTAMHELRTLPLPTLRSMAPSGFSTMLGWLAYEYAKE 296
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|698789602|ref|XP_009827833.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574116681|gb|ETV82164.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 77.411 bits (189), Expect = 2.683e-12 Identity = 79/297 (26.60%), Postives = 128/297 (43.10%), Query Frame = 0
Query: 87 DATDADDRGCTEA--GVIRAAVRSSINIYR--SILFGSFPR--RVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGI-TGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSLG 376
DA D DD A G +R A+R++I R + + GSFPR +VP K V+ +D +S D G KEA I + + K +L + VP++V+S LG+ + YE + L V + ST+ D+ +L +++G +AG+ HG L+ E A + G +H+ H ++F S+E K L+ H + G + A +GLV E +H +E + ++ R + LP LR ++ + L T LG
Sbjct: 12 DAEDDDDSSGEAALGGAMRNALRTAITRIRLQNPIVGSFPRTTKVPTKAVASASDNLSFLMD----VTGYVKEAKDQIAEKTSSKAK---------AVKLAHWATTTWVPNLVRSTILGSVTWTSYEVTTAHL---------VATSPALSTASDLQTLLPWAFGVSVVAGTVAGSLHGTLWSVSETALARFKREASSPFRVRGVLFSHTSTHLAMFASYETTKTFLMHQVEGDHTDVQGAACIVGAAAASGLVGELATHFAAPFEHQSFAAARQELRTLPLPSLRSMAPSGLSTMLG 286
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|673026136|ref|XP_008867029.1| (hypothetical protein H310_04450 [Aphanomyces invadans] >gi|574477076|gb|ETW04073.1| hypothetical protein H310_04450 [Aphanomyces invadans]) HSP 1 Score: 73.559 bits (179), Expect = 7.002e-11 Identity = 76/323 (23.53%), Postives = 134/323 (41.49%), Query Frame = 0
Query: 88 ATDADDRG-CTEAGVIRAAVRSSINIYR--SILFGSFPR--RVPLKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFEMYETSKDTLDNALGLDKDVDGEASFSTSRDVFSLSMMGI-------TGLISGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLGVFVVGAAGGLAGLVEETVSHLTPHWEKEGVSSLRAAFKRNGLPRLRVISSAALPTSL--------------GFLAWEYGR 384
A DA + G G +R A+R+++ R + + GSFPR +VP K V+ +D +S D G KEA I + + K +L + +P++V+S LG+ + YE + +L +TS + + I +++G +AG+ HG L+ E A + + G L+H+L H ++F S+E K L+ H + G + A +GLV E ++ +E++ ++ + LP LR ++ + T L G+LA+EY +
Sbjct: 16 ADDAPEHGEAALGGAMRNALRTAVTRIRLQNPIVGSFPRTPKVPTKAVATASDNLSFLMD----VTGYMKEAKEQIAEKTSSKAK---------AVKLVQWATTTWMPNLVRSTILGSVTWTSYEVTTASL---------------LATSPSTIASPHVAILVPWVFGVSIVAGTVAGSLHGSLWSVSERAMAAFKHEPSAFRI-PGVLLSHTLTHLAMFSSYEATKAFLMHDIEGDHTDIDGALCIVGAAATSGLVGEIATYYAAPFEQQSFTTAMHELRTLPLPTLRSMAPSGFSTMLGSPSLLPSETHARIGWLAYEYAK 309
BLAST of EWM24953.1 vs. NCBI_GenBank
Match: gi|1210528904|dbj|GAX12547.1| (hypothetical protein FisN_24Hh123 [Fistulifera solaris]) HSP 1 Score: 69.3218 bits (168), Expect = 2.336e-9 Identity = 91/369 (24.66%), Postives = 146/369 (39.57%), Query Frame = 0
Query: 90 DADDRGCTEAGVIRAAVRSSINIYRSI---LFGSFPRRVP--------------LKTVSKITDQVSTAWDAYSVFKGSHKEATRDIEVQNRPQHKESLGTAGLHKAQLFGQTLRSAVPHMVKSGFLGTAVFE--MYETSKDTLDNALGLDKD----------------VDGEASFSTSRDVFSLSMMGITGLI------------------SGGLAGTCHGLLYVGWEHARRLINAQHVVANVWTGTALAHSLAHASLFGSFEVLKDALLAITHARHEEPLG---------VFVVGAAGGLAGLVEETVSHL-------TPHWE-----KEGVSSLRAAFKRNGLPRLRVISSAALPTSLGFLAWEYGR 384
++ R + AGV+R RS I RSI + P++VP +K V+K++D++ST W+ YS K + E + PQ K + ++R+ ++++ +GTAVFE +Y SK + ++D + S DV T +I +G LAG GLL WE + + A L SL+HA LFGS+E K L+ H H P G + +G AGG+AG ++ +H P E K LR ++ P + + +A +P+++GF+A+EYG+
Sbjct: 28 NSPARNVSAAGVVRGVSRS---IARSIAKPIAKKIPKQVPKITKQLFTRRGQLRVKGVAKVSDRLSTGWEVYSSVKATVDEGSA-------PQKKTRSSWIPVWN------SVRTFTATLLRNSLVGTAVFETYVYAISKTVTNAPPECERDEIATIQQDSISDSSSAIPQNLHDSMDEDVDDDDDDDETEIIPLDAPDDFSRASIRVHVGAGALAGALDGLLSSVWESKSQSMQFFFQKA---PSLILQQSLSHALLFGSYEWCKRKLI---HQLHSSPWGEWKDSGLSHLMCIGLAGGVAGQLQTLTNHYGEQILERQPSTERLLRSKPWSVQLRFLVRKVHHPSMGSMMAAFVPSAVGFVAFEYGK 374 The following BLAST results are available for this feature:
BLAST of EWM24953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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