EWM24991.1, cds5697 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|585106624|gb|EWM24991.1| (macrophage migration inhibitory factor [Nannochloropsis gaditana]) HSP 1 Score: 490.345 bits (1261), Expect = 1.779e-175 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 Query: 1 MCHAAGPDLKPLNAITIKPRFIARQNSQLHIWLLAMRFVGGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTTYVDSTPHARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNTDRALQNRHKKRQNDVMVEYFIATEFFFLKLAVA 237 MCHAAGPDLKPLNAITIKPRFIARQNSQLHIWLLAMRFVGGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTTYVDSTPHARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNTDRALQNRHKKRQNDVMVEYFIATEFFFLKLAVA Sbjct: 1 MCHAAGPDLKPLNAITIKPRFIARQNSQLHIWLLAMRFVGGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTTYVDSTPHARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNTDRALQNRHKKRQNDVMVEYFIATEFFFLKLAVA 237
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|553179226|ref|XP_005852670.1| (phenylpyruvate tautomerase, partial [Nannochloropsis gaditana CCMP526] >gi|422295863|gb|EKU23162.1| phenylpyruvate tautomerase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 364.77 bits (935), Expect = 1.450e-126 Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0 Query: 24 RQNSQLHIWLLAMRFVGGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTTYVDSTPHARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 RQNSQLHIWLLAMRF GGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTT+VDSTP+ARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT Sbjct: 2 RQNSQLHIWLLAMRFGGGGVLLLPLVAFLIAQMHQVNAFMAYRPISLTTHVDSTPYARSFARTSVVVKPTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 182
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|873225295|emb|CEM24109.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 112.849 bits (281), Expect = 2.382e-28 Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 0 Query: 92 PTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 P+LIV T +L + AFL EAS V+ LGK ESY++VS S+M F G G AF+YLASIG IGP+TN + ++ LVEKH+G+P++R +IQF D+ +NF ++G T Sbjct: 3 PSLIVTSTA-DLDKAAEDAFLTEASSAVASGLGKPESYMLVSYTRSNMRFGGSEGPVAFVYLASIGKIGPDTNPKVSATISGLVEKHLGVPSDRCYIQFVDSPGSNFGYRGGT 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|567873809|ref|XP_006429494.1| (hypothetical protein CICLE_v10013125mg [Citrus clementina] >gi|568855034|ref|XP_006481117.1| PREDICTED: macrophage migration inhibitory factor homolog isoform X2 [Citrus sinensis] >gi|557531551|gb|ESR42734.1| hypothetical protein CICLE_v10013125mg [Citrus clementina]) HSP 1 Score: 81.6481 bits (200), Expect = 2.598e-16 Identity = 40/104 (38.46%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 102 ELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPS-SMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 +L + ++ L+EA+ TV+ +GK E+YVM+ + S MSF G AA+ L SIG + P+ NK + ++A++EK + +P +R FI+F D +NF W G+T Sbjct: 11 KLDGVDTSSILSEATSTVANIIGKPEAYVMIVLKGSVPMSFGGTEDPAAYGELVSIGGLNPDVNKKLSAAISAILEKKLSVPKSRFFIKFYDTKGSNFGWNGST 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|552821653|ref|XP_005845907.1| (hypothetical protein CHLNCDRAFT_136510 [Chlorella variabilis] >gi|307105556|gb|EFN53805.1| hypothetical protein CHLNCDRAFT_136510 [Chlorella variabilis]) HSP 1 Score: 81.6481 bits (200), Expect = 2.654e-16 Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 0 Query: 103 LPADEKAA--FLAEASKTVSVTLGKAESYVMVSV-CPSSMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 +P D +A +A+ SK V+ GK E YVMVS+ M F G AF L SIG IG E NK + L +V++H+G+PA+R++I+F D A ++F W G T Sbjct: 10 VPGDRVSASQIVADLSKAVAQATGKPEGYVMVSLETGKQMMFGGTEEPCAFGELISIGSIGGEKNKKISAALAEVVQRHLGVPASRMYIKFYDVARSDFGWNGTT 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|1101344891|ref|XP_018898183.1| (PREDICTED: macrophage migration inhibitory factor homolog [Bemisia tabaci]) HSP 1 Score: 80.8777 bits (198), Expect = 5.613e-16 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 0 Query: 102 ELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPSSM-SFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 ++PAD FL + V+ TLGK ESYV+V V P M SF G AA L SIG +G E NK +K L+A +EK +G+ NR++IQFSD + + + G+T Sbjct: 14 KVPAD----FLKTTTALVAKTLGKPESYVIVQVVPDQMLSFGGSTEAAANCLLMSIGKLGLEENKKHSKVLSAHLEKTLGVSPNRMYIQFSDLPSKDVGYDGST 113
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|302766481|ref|XP_002966661.1| (hypothetical protein SELMODRAFT_144009 [Selaginella moellendorffii] >gi|302792623|ref|XP_002978077.1| hypothetical protein SELMODRAFT_271294 [Selaginella moellendorffii] >gi|300154098|gb|EFJ20734.1| hypothetical protein SELMODRAFT_271294 [Selaginella moellendorffii] >gi|300166081|gb|EFJ32688.1| hypothetical protein SELMODRAFT_144009 [Selaginella moellendorffii]) HSP 1 Score: 80.1073 bits (196), Expect = 1.091e-15 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 0 Query: 92 PTLIVHHTGGELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPS-SMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 PTL + T L + L +AS+TV+ LGK ESYVM+ + + +SF G AA+ L SIG I P++NK +K + L++ + +P NR +I+F D +NF W G+T Sbjct: 2 PTLNIS-TNVPLDGVSTSDILKDASRTVARVLGKPESYVMIIINGAVPISFGGSEEPAAYGELVSIGAISPDSNKKLSKAIAELLQSKLAVPPNRFYIKFYDVKGSNFGWNGST 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|743782032|ref|XP_010921043.1| (PREDICTED: macrophage migration inhibitory factor homolog [Elaeis guineensis]) HSP 1 Score: 79.7221 bits (195), Expect = 1.333e-15 Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 0 Query: 107 EKAAFLAEASKTVSVTLGKAESYVMVSVCPS-SMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 + +A L+EA+KTV+ +GK E+YVM+ + S MSF G AA+ L SIG + P+ NK + + +++E + +P +R FI+F D +NF W G+T Sbjct: 16 DTSAILSEATKTVAKLIGKPEAYVMIVLKGSVPMSFGGTEQPAAYGELVSIGGLNPDVNKKLSGAIASILETKLSVPKSRFFIKFYDTKGSNFGWNGST 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|720027283|ref|XP_010264526.1| (PREDICTED: macrophage migration inhibitory factor homolog isoform X2 [Nelumbo nucifera]) HSP 1 Score: 78.9518 bits (193), Expect = 2.818e-15 Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 103 LPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPS-SMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNT 204 L + ++ L+EA+KTV+ +GK E+YVM+ + S MSF G AA+ L SIG + PE NK + + ++E + +P +R F++F D +NF W G+T Sbjct: 12 LDGVDTSSILSEATKTVAKIIGKPEAYVMIVLKGSVPMSFGGNEQPAAYGELVSIGGLNPEVNKKLSGAIATILETKLSVPKSRFFLKFYDTKGSNFGWNGST 114
BLAST of EWM24991.1 vs. NCBI_GenBank
Match: gi|914614999|ref|NP_001299021.1| (uncharacterized protein LOC106117964 [Papilio xuthus] >gi|389609061|dbj|BAM18142.1| unknown unsecreted protein [Papilio xuthus] >gi|930656569|gb|KPI98893.1| Macrophage migration inhibitory factor [Papilio xuthus]) HSP 1 Score: 78.5666 bits (192), Expect = 5.020e-15 Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 0 Query: 101 GELPADEKAAFLAEASKTVSVTLGKAESYVMVSVCPS-SMSFAGQPGNAAFLYLASIGHIGPETNKPAAKELTALVEKHMGIPANRVFIQFSDAAAANFAWQGNTDRAL 208 G++P D FL +A ++ LGK E Y +VS+ P MSF G A L SIG +G E NK AK L LVEK +G+P +R++I F D N ++G T +L Sbjct: 13 GKIPQD----FLTKAVPVLARALGKPEQYCVVSIIPDVPMSFGGSTDPCAIANLMSIGSLGVEQNKKHAKVLFELVEKELGVPQDRMYITFQDEPTGNVGFKGTTFHSL 117 The following BLAST results are available for this feature:
BLAST of EWM24991.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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