EWM25053.1, cds5631 (CDS) Nannochloropsis gaditana

Overview
NameEWM25053.1
Unique Namecds5631
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:476869..477909 -
Alignment locationCM002466.1:475989..476786 -
Alignment locationCM002466.1:475577..475887 -
Alignment locationCM002466.1:474501..475413 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25053.1
Productorigin recognition complex subunit 3
Orig transcript idgnl|cribi|Naga_100049g20.2112.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:476869..477909 -
CM002466.1supercontigCM002466.1:475989..476786 -
CM002466.1supercontigCM002466.1:475577..475887 -
CM002466.1supercontigCM002466.1:474501..475413 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005664nuclear origin of replication recognition complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR020795ORC3
Homology
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|585106689|gb|EWM25053.1| (origin recognition complex subunit 3 [Nannochloropsis gaditana])

HSP 1 Score: 2097.01 bits (5432), Expect = 0.000e+0
Identity = 1020/1020 (100.00%), Postives = 1020/1020 (100.00%), Query Frame = 0
Query:    1 MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE 1020
            MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE
Sbjct:    1 MVVQDDYIVVKSYRPPPQHVVSGKKRRYEAVAESAQHQARGGYGYLNEEQRECIMRCMAASRHVHREVAMSLYGPILVDVAGFLEGGRERRSVWQRVREKFIASAGGNPRTKQLACDLSSYIGQETPFQDTHPGDTSALLPCAVIYPNMHPTDRPELLSLLLQALHREHQTRRCLRGHIRSPLLGCTIRSTKHTTLSSILQVVHAKIMNAVDKLPLLARGPRKGGQRFRTSTAPQGTLGEVMSAYRTLVDGLAVLNASSLVPSTGESAASVVCPSVLLLFEDVEALSNRLLEDLLRLLAEASAFLPARLVFLVSPAFALAQNLGNGATATLEPATFILPPSHVCFEQVLERLFLDACLPVTVSGQVLRFFRVTFFDLHYSIITFLRHLDFMLRVHFSQLISLLCMMPYDLVAEKDLVHVAAPLVDAPVAALWSGEKIGSASKSEGPLGDDKSVPPEPSIASVVDGSSPAVPQSHGEEGEGEGKGGRGRSQAFFNKAHGTSVPRSGDSDGHEHCQEHAQIDLQRQVLVLTREEGGMHDSHHLMVLHHMDNLLRNRALRALLAKRLPPSASGAEEQHSEREQGEKAVEGYALSSQGRGGDRIRQFQCLRGLVHQQVAGRFELRLGCYLIHEALKICGAPPTGQKSDASAYGTDHAGNDGASRHSRHAERPAPSLPTRLMLLEVLLDYERPQRWRKLEASLWKGLASLTLEGLKNLVLAWLHLLQALLEQMPLYVRRSSRAINDWIVRVRELWMLLKALGKEIAKEGKQQQRRRKSQKLGTGSERGMGGRKVGAARDEATEENDEERRHMYRLKRHGITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFAYTLLGGKQERPQEEMTQETE 1020          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1032654621|gb|OAQ35888.1| (hypothetical protein K457DRAFT_13122 [Mortierella elongata AG-77])

HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-13
Identity = 57/167 (34.13%), Postives = 81/167 (48.50%), Query Frame = 0
Query:  845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCRP--GQLD--------PTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNL--KPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIF 999
            ++Y+     Q+AF  QPRAS   AL   + YL C CCRP  G  D        PT  D  ++Y LY    GR IN+  WF +F  ++    +   +EE    + A  G  G  VG K ART E +    L  K + ARF+  V EL+ +GF +   ++T    +L +
Sbjct:  648 YYYSQIAIQQKAFLPQPRASVQTALGQPEVYLNCDCCRPPSGSADQSLADMVLPTQHDTCILYKLY-VECGRMINMYDWFTAFGMILERGEQSTGVEEPPAKKRA--GAKGSRVGSK-ARTKENANTNKLDQKDVQARFISGVAELQFMGFIKSTTRKTDHVMRLTW 810          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|729699690|emb|CEJ03221.1| (hypothetical protein RMCBS344292_17209 [Rhizopus microsporus])

HSP 1 Score: 82.8037 bits (203), Expect = 5.932e-13
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0
Query:  815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000
            I +D    + DV+ H  +   +   Y     +YT+ + ++++F +QPRA+   AL     YL C CC   +   L P+ PD  ++Y LY    GR INL  WF +F+ VI         E+EK  +  +E E                         ARF+ +V EL+ LGF +P  ++T    +L ++
Sbjct:  249 IAIDIADWINDVLGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 402          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|729718096|emb|CEI85688.1| (hypothetical protein RMCBS344292_00145 [Rhizopus microsporus])

HSP 1 Score: 82.8037 bits (203), Expect = 6.728e-13
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0
Query:  815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000
            I +D    + DV+ H  +   +   Y     +YT+ + ++++F +QPRA+   AL     YL C CC   +   L P+ PD  ++Y LY    GR INL  WF +F+ VI         E+EK  +  +E E                         ARF+ +V EL+ LGF +P  ++T    +L ++
Sbjct:  249 IAIDIADWINDVLGHYLEPFTKKPLY--EITYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGDSKERHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 402          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1178064042|gb|ORE18500.1| (hypothetical protein BCV71DRAFT_115541 [Rhizopus microsporus])

HSP 1 Score: 82.4185 bits (202), Expect = 1.985e-12
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0
Query:  815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000
            I +D    + DV+ H  +   +   Y     +YT+ + ++++F +QPRA+   AL     YL C CC   +   L P+ PD  ++Y LY    GR INL  WF +F+ VI         E+EK  +  +E E                         ARF+ +V EL+ LGF +P  ++T    +L ++
Sbjct:  387 IAIDIADWINDVLGHYLEPFTKKPLY--EITYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGDSKERHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 540          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1178056510|gb|ORE11862.1| (hypothetical protein BCV72DRAFT_196919 [Rhizopus microsporus var. microsporus])

HSP 1 Score: 81.6481 bits (200), Expect = 2.919e-12
Identity = 53/189 (28.04%), Postives = 86/189 (45.50%), Query Frame = 0
Query:  815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000
            I +D    + D++ H  +   +   Y     +YT+ + ++++F +QPRA+   AL     YL C CC   +   L P+ PD  ++Y LY    GR INL  WF +F+ VI         E+EK  +  +E E                         ARF+ +V EL+ LGF +P  ++T    +L ++
Sbjct:  422 IAIDIADWINDILGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 575          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|727154447|emb|CEG63304.1| (hypothetical protein RMATCC62417_00469 [Rhizopus microsporus])

HSP 1 Score: 82.4185 bits (202), Expect = 3.018e-12
Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 0
Query:  815 ITVDTQSLLADVIEHCTQTLAQATSYFKGAFWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC---RPGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIFA 1000
            I +D    + DV+ H  +   +   Y     +YT+ + ++++F +QPRA+   AL     YL C CC   +   L P+ PD  ++Y LY    GR INL  WF +F+ VI         E+EK  +  +E E                         ARF+ +V EL+ LGF +P  ++T    +L ++
Sbjct:  636 IAIDIADWINDVLGHYLEPFTKKPLY--EIAYYTNVRLLEKSFASQPRATVQTALTQPSHYLNCTCCGGSKEKHLAPSEPDACVLYKLY-LECGRMINLYDWFVAFSSVI---------EKEKRDKPLEENEAQ-----------------------ARFIKSVAELQFLGFIKPTQRKTDHVQRLTWS 789          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|961106266|ref|XP_014777255.1| (PREDICTED: origin recognition complex subunit 3-like isoform X2 [Octopus bimaculoides])

HSP 1 Score: 81.6481 bits (200), Expect = 3.720e-12
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0
Query:  845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCR--PGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKL 997
            F+Y     +Q+ F A PRA+  +AL+   SYL+C+CC   PG +  T PD+S+ Y L+    GR INL  W  SF  V+                  ++ EN      K  R  +  V Q      ARF+ A+ EL+ LGF +P  ++T   A+L
Sbjct:  530 FYYDSLPILQDYFTACPRAAIQKALSQPHSYLKCSCCEADPGVILSTFPDVSVAYKLH-LECGRLINLYDWLQSFITVL------------------EDSEN------KPKRKDQHKVLQ------ARFIQAISELQFLGFIKPTRQKTDHVARL 653          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|961106263|ref|XP_014777254.1| (PREDICTED: origin recognition complex subunit 3-like isoform X1 [Octopus bimaculoides] >gi|918311078|gb|KOF81613.1| hypothetical protein OCBIM_22026294mg [Octopus bimaculoides])

HSP 1 Score: 81.2629 bits (199), Expect = 5.015e-12
Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 0
Query:  845 FWYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACCR--PGQLDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVICGPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQNLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKL 997
            F+Y     +Q+ F A PRA+  +AL+   SYL+C+CC   PG +  T PD+S+ Y L+    GR INL  W  SF  V+                  ++ EN      K  R  +  V Q      ARF+ A+ EL+ LGF +P  ++T   A+L
Sbjct:  588 FYYDSLPILQDYFTACPRAAIQKALSQPHSYLKCSCCEADPGVILSTFPDVSVAYKLH-LECGRLINLYDWLQSFITVL------------------EDSEN------KPKRKDQHKVLQ------ARFIQAISELQFLGFIKPTRQKTDHVARL 711          
BLAST of EWM25053.1 vs. NCBI_GenBank
Match: gi|1001613993|gb|KXS17745.1| (hypothetical protein M427DRAFT_153635 [Gonapodya prolifera JEL478])

HSP 1 Score: 81.2629 bits (199), Expect = 6.044e-12
Identity = 64/195 (32.82%), Postives = 84/195 (43.08%), Query Frame = 0
Query:  846 WYTDTQAIQEAFFAQPRASAVRALNDSQSYLRCACC----RPGQ--LDPTMPDISLVYGLYEAHQGRTINLRAWFASFADVIC--------GPGEEAKLEEEKCGEGADEGENGKHVGKKRARTTETSVGQ---------------------------NLKPLWARFLHAVDELEHLGFTRPYGKRTGDRAKLIF 999
            ++ D   I+  F  Q   S+  AL  S +YLRC CC    R G+  + PTM D S+ YGLY   QG+ IN+  WF SF  V+         G GE    E +  G GA+    G   GK +A     S GQ                           +LK +  RF  A  EL+ LG+ RP  ++T   AKL F
Sbjct:  720 YFDDVGVIENTFMPQLFPSSHVALAASATYLRCECCPVPQRHGEHVVSPTMHDTSIAYGLY-LEQGKLINMYDWFQSFKAVVAPEERGHADGAGELG--ERDGSGGGAETPTKGSAKGKGKATVRNGSGGQESRGAMNGSTDDGESGELAVGDLTCDADLKMVQVRFARATAELQMLGYIRPTKRKTDHVAKLKF 911          
The following BLAST results are available for this feature:
BLAST of EWM25053.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585106689|gb|EWM25053.1|0.000e+0100.00origin recognition complex subunit 3 [Nannochlorop... [more]
gi|1032654621|gb|OAQ35888.1|3.084e-1334.13hypothetical protein K457DRAFT_13122 [Mortierella ... [more]
gi|729699690|emb|CEJ03221.1|5.932e-1328.57hypothetical protein RMCBS344292_17209 [Rhizopus m... [more]
gi|729718096|emb|CEI85688.1|6.728e-1328.57hypothetical protein RMCBS344292_00145 [Rhizopus m... [more]
gi|1178064042|gb|ORE18500.1|1.985e-1228.57hypothetical protein BCV71DRAFT_115541 [Rhizopus m... [more]
gi|1178056510|gb|ORE11862.1|2.919e-1228.04hypothetical protein BCV72DRAFT_196919 [Rhizopus m... [more]
gi|727154447|emb|CEG63304.1|3.018e-1228.57hypothetical protein RMATCC62417_00469 [Rhizopus m... [more]
gi|961106266|ref|XP_014777255.1|3.720e-1233.55PREDICTED: origin recognition complex subunit 3-li... [more]
gi|961106263|ref|XP_014777254.1|5.015e-1233.55PREDICTED: origin recognition complex subunit 3-li... [more]
gi|1001613993|gb|KXS17745.1|6.044e-1232.82hypothetical protein M427DRAFT_153635 [Gonapodya p... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5646rna5646Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications