EWM25073.1, cds5594 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM25073.1
Unique Name	cds5594
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002466.1:399351..399393 +
Alignment location	CM002466.1:399590..399809 +
Alignment location	CM002466.1:400048..400364 +
Alignment location	CM002466.1:400496..400758 +
Alignment location	CM002466.1:400805..401071 +
Alignment location	CM002466.1:401579..403061 +
Alignment location	CM002466.1:403115..403314 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM25073.1
Product	cell division protein
Orig transcript id	gnl\|cribi\|Naga_100098g5.5267.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002466.1	supercontig	CM002466.1:399351..399393 +
CM002466.1	supercontig	CM002466.1:399590..399809 +
CM002466.1	supercontig	CM002466.1:400048..400364 +
CM002466.1	supercontig	CM002466.1:400496..400758 +
CM002466.1	supercontig	CM002466.1:400805..401071 +
CM002466.1	supercontig	CM002466.1:401579..403061 +
CM002466.1	supercontig	CM002466.1:403115..403314 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0016740	transferase activity
GO:0000166	nucleotide binding
GO:0005515	protein binding
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006139	nucleobase-containing compound metabolic process
GO:0009058	biosynthetic process
GO:0016043	cellular component organization
GO:0051258	protein polymerization
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005856	cytoskeleton
GO:0005874	microtubule
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR008280	Tub_FtsZ_C
IPR017986	WD40_repeat_dom
IPR017975	Tubulin_CS
IPR020805	Cell_div_FtsZ_CS
IPR019775	WD40_repeat_CS
IPR024757	FtsZ_C
IPR015943	WD40/YVTN_repeat-like_dom
IPR001680	WD40_repeat
IPR003008	Tubulin_FtsZ_GTPase
IPR018316	Tubulin/FtsZ_2-layer-sand-dom
IPR000158	Cell_div_FtsZ

Homology

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BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|585106710|gb|EWM25073.1| (cell division protein [Nannochloropsis gaditana])

HSP 1 Score: 1911.73 bits (4951), Expect = 0.000e+0
Identity = 930/930 (100.00%), Postives = 930/930 (100.00%), Query Frame = 0

Query:    1 MAENKESRNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGETGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSARVWDAITGAELEHFPHKHIVRTVEFAPDSRRFVSGGNEGKLRVYDLMEPSAPPMTMDLPKSGTTFSKAVWDQSDPQRVLTGSSDGKVRAWDLRARKETQVAEVQGNVMDLELSPKVGDILTVCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGPAVKTGLCAFGQHKWIRNGGLHHTWLRRSGSHSPLLLSPAWPMSCRRVNSSRIRFLLFEPTPVIDFVAWMTLPKELKRAIEIKGARSPTWVSFWCHWSTREWKRVWLARFLQMWPLGFPVVRLMAGVGVLLLQSGCSSSATLTKAAFLAPATGINVKRSSFYGSKTSLAADAASDAASLSRDIPNSRSLYQQQQLEQQRALHEQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDNLDDLLTTLDQQLSGPGRPKGAASPTPSSMQQSAFPTPTPPSQQPPPVYEKTYSEGGTLSEIVDFPSTFEWGGWRHPLGGEEVHDRKEKMGLIKLEIEYGWERGREGTRVPLFMPCLCLCYLP 930
            MAENKESRNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGETGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSARVWDAITGAELEHFPHKHIVRTVEFAPDSRRFVSGGNEGKLRVYDLMEPSAPPMTMDLPKSGTTFSKAVWDQSDPQRVLTGSSDGKVRAWDLRARKETQVAEVQGNVMDLELSPKVGDILTVCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGPAVKTGLCAFGQHKWIRNGGLHHTWLRRSGSHSPLLLSPAWPMSCRRVNSSRIRFLLFEPTPVIDFVAWMTLPKELKRAIEIKGARSPTWVSFWCHWSTREWKRVWLARFLQMWPLGFPVVRLMAGVGVLLLQSGCSSSATLTKAAFLAPATGINVKRSSFYGSKTSLAADAASDAASLSRDIPNSRSLYQQQQLEQQRALHEQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDNLDDLLTTLDQQLSGPGRPKGAASPTPSSMQQSAFPTPTPPSQQPPPVYEKTYSEGGTLSEIVDFPSTFEWGGWRHPLGGEEVHDRKEKMGLIKLEIEYGWERGREGTRVPLFMPCLCLCYLP
Sbjct:    1 MAENKESRNRQIPIVCPGHSRPLAGVEYSPVTPDGVFLISACHDKEPMLRNGETGDWIGTFKGHKGAVWSAKLNKDATFALTGSGDFSARVWDAITGAELEHFPHKHIVRTVEFAPDSRRFVSGGNEGKLRVYDLMEPSAPPMTMDLPKSGTTFSKAVWDQSDPQRVLTGSSDGKVRAWDLRARKETQVAEVQGNVMDLELSPKVGDILTVCAGDKVTFLDTATLLPIKSFPMPMHFREEGGASLHPDRQLFIAGGSDLWVRVFDYNTGAELECHKGHHGPAVKTGLCAFGQHKWIRNGGLHHTWLRRSGSHSPLLLSPAWPMSCRRVNSSRIRFLLFEPTPVIDFVAWMTLPKELKRAIEIKGARSPTWVSFWCHWSTREWKRVWLARFLQMWPLGFPVVRLMAGVGVLLLQSGCSSSATLTKAAFLAPATGINVKRSSFYGSKTSLAADAASDAASLSRDIPNSRSLYQQQQLEQQRALHEQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDNLDDLLTTLDQQLSGPGRPKGAASPTPSSMQQSAFPTPTPPSQQPPPVYEKTYSEGGTLSEIVDFPSTFEWGGWRHPLGGEEVHDRKEKMGLIKLEIEYGWERGREGTRVPLFMPCLCLCYLP 930

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|399949929|gb|AFP65585.1| (cell division protein [Chroomonas mesostigmatica CCMP1168])

HSP 1 Score: 401.749 bits (1031), Expect = 3.701e-128
Identity = 225/307 (73.29%), Postives = 261/307 (85.02%), Query Frame = 0

Query:  493 SPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFS 799
            SPC IKVIGVGGGG NAVNRMV   + GVEFW+INTDAQAL++S  P   NIG  +TRGLGAGG P +GR AAEESR+ I EAV+  DLVFVTAGMGGGTGSGAAPVVAEVAK++G LTVGVVT+PFGFEGR+RM QA  AI  ++ +VDTLI VSND+LLQIVPDN PL DAF VAD+ LR GVVGIS+IIV+PGLINVDFADVR+VM +AG+ALMG G G GKTRAQDAAV+AI SPLLDFPI+KAKGIVFN+ GG D+TL EIN+AA+VIYE V  +ANIIFGA+VD  +++++SITV+ATGFS
Sbjct:   57 SPCLIKVIGVGGGGGNAVNRMVGC-VEGVEFWSINTDAQALSRSLAPNTCNIGAKLTRGLGAGGNPEIGRKAAEESRDLIGEAVSAGDLVFVTAGMGGGTGSGAAPVVAEVAKEMGCLTVGVVTKPFGFEGRRRMQQATDAIANLRERVDTLIIVSNDKLLQIVPDNTPLQDAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSVMADAGSALMGIGTGSGKTRAQDAAVAAISSPLLDFPIEKAKGIVFNITGGHDMTLHEINSAAEVIYEAVDPNANIIFGALVDDNMENEISITVVATGFS 362

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BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|160331851|ref|XP_001712632.1| (ftsZ [Hemiselmis andersenii] >gi|159766081|gb|ABW98307.1| ftsZ [Hemiselmis andersenii])

HSP 1 Score: 402.134 bits (1032), Expect = 3.707e-128
Identity = 225/317 (70.98%), Postives = 265/317 (83.60%), Query Frame = 0

Query:  483 EQLAAIPDSGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFS 799
            +  ++  +  SPC IKVIGVGGGG NAVNRMV   + GVEFW+INTDAQAL++S  P   NIG  +TRGLGAGG P +GR AAEESR+ I EAV+  DLVFVTAGMGGGTGSGAAPVVAEVAK++G LTVGVVT+PFGFEGR+RM QA  AI  ++ +VDTLI VSND+LLQIVPDN PL DAF VAD+ LR GVVGIS+IIV+PGLINVDFADVR+VM +AG+ALMG G G GKTRAQDAAV+AI SPLLDFPI+KAKGIVFN+ GG D+TL EIN+AA+VIYE V  +ANIIFGA+VD  +++++SITV+ATGFS
Sbjct:   49 QNFSSNENGASPCLIKVIGVGGGGGNAVNRMVGC-VEGVEFWSINTDAQALSRSLAPNTCNIGAKLTRGLGAGGNPEIGRKAAEESRDLIGEAVSAGDLVFVTAGMGGGTGSGAAPVVAEVAKEMGCLTVGVVTKPFGFEGRRRMQQATDAITNLRERVDTLIVVSNDKLLQIVPDNTPLQDAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSVMADAGSALMGIGTGSGKTRAQDAAVAAISSPLLDFPIEKAKGIVFNITGGHDMTLHEINSAAEVIYEAVDPNANIIFGALVDENMENEISITVVATGFS 364

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|5689231|dbj|BAA82871.1| (plastid division protein FtsZ [Cyanidium caldarium])

HSP 1 Score: 402.134 bits (1032), Expect = 6.652e-127
Identity = 229/340 (67.35%), Postives = 268/340 (78.82%), Query Frame = 0

Query:  494 PCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASEDN------LDDLLTTLDQQLSGPGRPK 827
            PC IKVIGVGGGG NAVNRM    I+GVEFWAINTD QAL +S   + L IGN +TRGLGAGG P +GR AAEES ++IAEAV GADLVFVTAGMGGGTGSGAAPVVAE A++ G LTVGVVT+PF FEGR+RM QA  AI+ ++  VDTLI VSND+LLQIVP+N PL DAF VAD+ LR GVVGISDII++PGLINVDFADVR+VM +AG+ALMG G G GK+RA DAAV+AI SPLLDFPI++AKGIVFNV GG D+TL EIN AA+VIYE V  +ANIIFGA+VD +++ ++SITV+ATGF   PN S  N      L+   +   Q  +GP  PK
Sbjct:  100 PCLIKVIGVGGGGGNAVNRMADTGISGVEFWAINTDVQALKRSAAHHTLGIGNKLTRGLGAGGNPEIGRKAAEESCDQIAEAVRGADLVFVTAGMGGGTGSGAAPVVAEAAREQGCLTVGVVTKPFAFEGRRRMTQALEAIEALRESVDTLIVVSNDKLLQIVPENTPLQDAFRVADDILRQGVVGISDIIIRPGLINVDFADVRSVMAHAGSALMGIGTGSGKSRAHDAAVAAISSPLLDFPIERAKGIVFNVTGGEDMTLHEINQAAEVIYEAVDPNANIIFGALVDQQMESEISITVVATGFP-QPNESASNGGTSSTLNATASDFYQAGTGPSGPK 438

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BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|3980272|emb|CAA07676.1| (cell division protein, partial [Guillardia theta])

HSP 1 Score: 396.741 bits (1018), Expect = 2.530e-126
Identity = 226/316 (71.52%), Postives = 267/316 (84.49%), Query Frame = 0

Query:  491 SGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASE 806
            S SPC IKVIGVGGGG NAVNRMV   + GVEFW+INTDAQAL++S  P   NIG  +TRGLGAGG P +GR AAEESR+ IAEAV+  DLVFVTAGMGGGTGSGAAP+VAEVAK++G LTVGVVT+PF FEG++RM QA  AI  +++KVDTLI VSND+LLQIVPDN PL DAF VAD+ LR GVVGIS+IIV+PGLINVDFADVR+VM +AG+ALMG G G GKTRAQDAAV+AI SPLLDFPI+KA+GIVFN+ GG D+TL EIN+AA+VIYE V  +ANIIFGA+VD  +++++SITV+ATGF+  PN S+
Sbjct:   47 SSSPCVIKVIGVGGGGGNAVNRMVG-GVEGVEFWSINTDAQALSRSLAPNTCNIGAKLTRGLGAGGNPEIGRKAAEESRDLIAEAVSAGDLVFVTAGMGGGTGSGAAPIVAEVAKEMGCLTVGVVTKPFAFEGKRRMQQANDAILNLRNKVDTLIVVSNDKLLQIVPDNTPLQDAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSVMADAGSALMGIGTGSGKTRAQDAAVAAISSPLLDFPIEKARGIVFNITGGQDMTLHEINSAAEVIYEAVDSNANIIFGALVDDNMENEISITVVATGFT-QPNDSK 360

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|162606304|ref|XP_001713182.1| (cell division protein FtsZ [Guillardia theta] >gi|4583660|emb|CAB40398.1| cell division protein FtsZ [Guillardia theta])

HSP 1 Score: 396.356 bits (1017), Expect = 3.005e-126
Identity = 226/316 (71.52%), Postives = 267/316 (84.49%), Query Frame = 0

Query:  491 SGSPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGFSLNPNASE 806
            S SPC IKVIGVGGGG NAVNRMV   + GVEFW+INTDAQAL++S  P   NIG  +TRGLGAGG P +GR AAEESR+ IAEAV+  DLVFVTAGMGGGTGSGAAP+VAEVAK++G LTVGVVT+PF FEG++RM QA  AI  +++KVDTLI VSND+LLQIVPDN PL DAF VAD+ LR GVVGIS+IIV+PGLINVDFADVR+VM +AG+ALMG G G GKTRAQDAAV+AI SPLLDFPI+KA+GIVFN+ GG D+TL EIN+AA+VIYE V  +ANIIFGA+VD  +++++SITV+ATGF+  PN S+
Sbjct:   47 SSSPCVIKVIGVGGGGGNAVNRMVG-GVEGVEFWSINTDAQALSRSLAPNTCNIGAKLTRGLGAGGNPEIGRKAAEESRDLIAEAVSAGDLVFVTAGMGGGTGSGAAPIVAEVAKEMGCLTVGVVTKPFAFEGKRRMQQANDAILNLRNKVDTLIVVSNDKLLQIVPDNTPLQDAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSVMADAGSALMGIGTGSGKTRAQDAAVAAISSPLLDFPIEKARGIVFNITGGQDMTLHEINSAAEVIYEAVDSNANIIFGALVDDNMENEISITVVATGFT-QPNDSK 360

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|544217100|ref|XP_005538694.1| (plastid division protein FtsZ2-1 [Cyanidioschyzon merolae strain 10D] >gi|6009903|dbj|BAA85116.1| plastid division protein FtsZ [Cyanidioschyzon merolae] >gi|34850216|dbj|BAC87807.1| chloroplast division protein cmFtsZ2-1 [Cyanidioschyzon merolae] >gi|449019256|dbj|BAM82658.1| plastid division protein FtsZ2-1 [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 399.823 bits (1026), Expect = 4.235e-126
Identity = 227/339 (66.96%), Postives = 266/339 (78.47%), Query Frame = 0

Query:  494 PCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGF-----SLNPNASEDNLDDLLTTLDQQLSGPGRPK 827
            PC IKVIGVGGGG NAVNRM    I+GVEFWAINTD QAL +S   + L+IGN +TRGLGAGG P VGR AAEES ++IAEAV GADLVFVTAGMGGGTGSGAAPVVAE A++ G LTVGVVT+PF FEGR+RM QA  AI+ ++  VDTLI VSND+LLQIVP+N PL DAF VAD+ LR GVVGISDII++PGLINVDFADVR+VM +AG+ALMG G G GK+RA DAAV+AI SPLLDFPI++AKGIVFNV GG D+TL EIN AA+VIYE V  +ANIIFGA++D +++ ++SITV+ATGF     S N   S   L+       Q  + P  PK
Sbjct:  100 PCLIKVIGVGGGGGNAVNRMADTGISGVEFWAINTDVQALKRSAAHHTLSIGNKLTRGLGAGGNPEVGRKAAEESCDQIAEAVRGADLVFVTAGMGGGTGSGAAPVVAEAAREQGCLTVGVVTKPFAFEGRKRMNQALEAIEALRESVDTLIVVSNDKLLQIVPENTPLQDAFRVADDILRQGVVGISDIIIRPGLINVDFADVRSVMAHAGSALMGIGTGSGKSRAHDAAVAAISSPLLDFPIERAKGIVFNVTGGEDMTLHEINQAAEVIYEAVDPNANIIFGALIDQQMESEISITVVATGFPQPNESANSGGSSSTLNATANEFYQAGAAPSSPK 438

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|397635435|gb|EJK71860.1| (hypothetical protein THAOC_06661 [Thalassiosira oceanica])

HSP 1 Score: 388.652 bits (997), Expect = 7.712e-122
Identity = 218/314 (69.43%), Postives = 258/314 (82.17%), Query Frame = 0

Query:  486 AAIPDSGS-PCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGF 798
            A +P+ G+ PC IKV+GVGGGG NAVNRM+   I GV FWA+NTDAQALAKS  P  LNIG  +TRGLGAGG P VG+ +A E+  EI E   G+D+VF+TAGMGGGTGSGA P+VAE+A+D G LTVGVVT+PF FEGR+RM QA+AAI E++  VDTLI VSND+LL+IVP+N P+TDAFLVAD+ LR GVVGIS+II+K GL+NVDFADVRAVM++AGTALMG G G GKTRA DAAV+AI SPLLDFPI +AK IVFNV GGSDL L EINAA++VIYEN  EDANIIFGA++D  + ++VSITVLA  F
Sbjct:   88 AIMPEGGANPCVIKVLGVGGGGGNAVNRMIQTRIDGVSFWAVNTDAQALAKSLSPNVLNIGRSLTRGLGAGGVPDVGKESALENTAEIKEICRGSDMVFITAGMGGGTGSGAGPIVAEIARDEGCLTVGVVTKPFAFEGRKRMKQAEAAIVELRKHVDTLIVVSNDKLLRIVPENTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADVRAVMKDAGTALMGVGTGAGKTRATDAAVAAISSPLLDFPISEAKRIVFNVVGGSDLGLSEINAASEVIYENAHEDANIIFGALIDPDMGEEVSITVLACDF 401

[Close]

BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|224012130|ref|XP_002294718.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969738|gb|EED88078.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 386.341 bits (991), Expect = 1.166e-120
Identity = 216/312 (69.23%), Postives = 256/312 (82.05%), Query Frame = 0

Query:  488 IPDSGS-PCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGF 798
            IP+ G+ PC IKV+GVGGGG NAVNRM+   I GV FWA+NTDAQALAKS  P  LNIG  +TRGLGAGG P VG+ +A E+ EEI +   GAD+VF+TAGMGGGTGSGA PVVAE+A+D G LTVGVVT+PF FEG++RM QA+ AI+E++  VDTLI VSND+LL+IVP+N P+TDAFLVAD+ LR GVVGIS+II+K GL+NVDFADVRAVM++AGTALMG G G GKTRA DAAV+AI SPLLDFPI +AK IVFNV GG  L L EINAA++VIYEN  EDANIIFGA++D  + ++VSITVLA  F
Sbjct:  118 IPEGGTNPCIIKVLGVGGGGGNAVNRMIQTRIDGVSFWAVNTDAQALAKSLAPNVLNIGRMVTRGLGAGGVPDVGKKSALENGEEIKQICKGADMVFITAGMGGGTGSGAGPVVAEIARDEGCLTVGVVTKPFAFEGKKRMQQAEGAIKELRKHVDTLIVVSNDKLLRIVPENTPVTDAFLVADDILRQGVVGISEIIIKTGLVNVDFADVRAVMKDAGTALMGVGTGVGKTRATDAAVAAISSPLLDFPISEAKRIVFNVVGGPGLGLSEINAASEVIYENAHEDANIIFGALIDPDMGEEVSITVLACDF 429

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BLAST of EWM25073.1 vs. NCBI_GenBank
Match: gi|545709729|ref|XP_005707174.1| (cell division protein FtsZ [Galdieria sulphuraria] >gi|452823645|gb|EME30654.1| cell division protein FtsZ [Galdieria sulphuraria])

HSP 1 Score: 380.178 bits (975), Expect = 8.506e-119
Identity = 211/306 (68.95%), Postives = 258/306 (84.31%), Query Frame = 0

Query:  493 SPCRIKVIGVGGGGSNAVNRMVTQDITGVEFWAINTDAQALAKSKVPYKLNIGNHITRGLGAGGKPLVGRNAAEESREEIAEAVAGADLVFVTAGMGGGTGSGAAPVVAEVAKDLGILTVGVVTRPFGFEGRQRMAQAKAAIQEMQSKVDTLITVSNDRLLQIVPDNFPLTDAFLVADEALRDGVVGISDIIVKPGLINVDFADVRAVMQNAGTALMGTGWGKGKTRAQDAAVSAIKSPLLDFPIKKAKGIVFNVCGGSDLTLGEINAAAQVIYENVAEDANIIFGAVVDAKLKDQVSITVLATGF 798
            +PC IKV+GVGGGGSNAVNRM    + GVEFW INTDAQAL++ K    + IG+ ITRGLGAGGKP VGR AAEES+  I+ AV G DLVFVTAGMGGGTGSGAAP+VA++AK+ G LTVGVVT+PF FEGR+RM QA+ AI+ ++ +VDTLI VSND+LL+IVP+N  L  AF VAD+ LR GVVGIS+IIV+PGLINVDFADVR++M +AG+ALMG G G GK+RA+DAAV+AI SPLLDFPI++AKGIVFN+ GG+D+TL EINAAA+VIYE V  +ANIIFGA+VD  +++++SITV+ATGF
Sbjct:  119 NPCVIKVVGVGGGGSNAVNRMCGM-VEGVEFWCINTDAQALSRVKTSNSVTIGSEITRGLGAGGKPEVGRQAAEESQAAISSAVQGGDLVFVTAGMGGGTGSGAAPIVAKIAKEQGCLTVGVVTKPFSFEGRRRMQQAEEAIEALRKEVDTLIVVSNDKLLEIVPENTALEKAFSVADDILRQGVVGISEIIVRPGLINVDFADVRSIMADAGSALMGIGSGSGKSRAKDAAVAAISSPLLDFPIERAKGIVFNITGGNDMTLHEINAAAEVIYEAVDLNANIIFGALVDDSMENELSITVIATGF 423

The following BLAST results are available for this feature:

BLAST of EWM25073.1 vs. NCBI_GenBank

BLAST of EWM25073.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585106710\|gb\|EWM25073.1\|	0.000e+0	100.00	cell division protein [Nannochloropsis gaditana]	[more]
gi\|399949929\|gb\|AFP65585.1\|	3.701e-128	73.29	cell division protein [Chroomonas mesostigmatica C...	[more]
gi\|160331851\|ref\|XP_001712632.1\|	3.707e-128	70.98	ftsZ [Hemiselmis andersenii] >gi\|159766081\|gb\|ABW9...	[more]
gi\|5689231\|dbj\|BAA82871.1\|	6.652e-127	67.35	plastid division protein FtsZ [Cyanidium caldarium...	[more]
gi\|3980272\|emb\|CAA07676.1\|	2.530e-126	71.52	cell division protein, partial [Guillardia theta]	[more]
gi\|162606304\|ref\|XP_001713182.1\|	3.005e-126	71.52	cell division protein FtsZ [Guillardia theta] >gi\|...	[more]
gi\|544217100\|ref\|XP_005538694.1\|	4.235e-126	66.96	plastid division protein FtsZ2-1 [Cyanidioschyzon ...	[more]
gi\|397635435\|gb\|EJK71860.1\|	7.712e-122	69.43	hypothetical protein THAOC_06661 [Thalassiosira oc...	[more]
gi\|224012130\|ref\|XP_002294718.1\|	1.166e-120	69.23	predicted protein [Thalassiosira pseudonana CCMP13...	[more]
gi\|545709729\|ref\|XP_005707174.1\|	8.506e-119	68.95	cell division protein FtsZ [Galdieria sulphuraria]...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna5608	rna5608	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications