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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100801g2.5525.mrna |
| Orig protein id | gnl|cribi|Naga_100801g2.5525 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:155760..156384 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5510 ID=rna5510|Name=rna5510|organism=Nannochloropsis gaditana|type=mRNA|length=926bp
TTGACAACGGCGACAACTTGGCGTCGTGGATGAACATTGATAAACGACAC
GTGACTTGTTTATCGCCTGGTGATTGTCTGTGGGAGGGATACAAAGCGTT
GTGGGCAGCACTGAGAACTTGATGTAACGCACGTACAAGTCCTTCCTTCG
ACTGCCCCTCCGACTTCAAAGTGCTGGGGATTAGCATCAAGTGGAGTTGC
TCGTTCTATGCACACTTTTTTGCTTATCATTACTAAGCTAAGAAATGACT
TGACGCTTATTGGGCAACAAGCATGCCTCCCCTCGTTCGTGCTTGACCTT
TCGCCCCCATGCCTCCCGTTTTATCCAGGCCAGCCCCAATGCCATCTGAA
ACGCCCGGGTCCTCAATGACCATCTGCCTGCGCTCTCGTTTGTCACTGCT
CCTCATGATGTTCCCAGCTTTAGATGTAGCCGCGCTCGATGCATCTATAC
CCCTTTGCTTCTTCCGATTGCCCTTCCACGCAGCCACCACGACAGCAACC
CCCTCGGTCTCTTTTCCCTTTCGCCTACTTTCTCTTACCCTCTTGACCCC
TCCCTCCTCCTCCTCCTCCTCCTTCGTGTCCACCTTCTCACCCTTTCTCT
TCCCCCTCGCCCTCTACTCCACTCCTCCCTCCACCCCTCCCACGTCCTCC
CCCCCCGCTTTGTCCGCTTCCACTGCCCTCCCTTCCGAAGCCTACCGGAC
CTGCCGCCTCTGTCTCCGCCCCTACCTCCCTTCCCGCAACCACGACACTG
CATGCCGATACCACCCCAGCGCGTACATTGGCAATGAACGGAGCAAATTT
TGCGGTACACGAAGCGGGGGAAACGAGCGCGGCTTGGCCCGGTTTTGGGA
TTGCTGCGGGGAGGAGAGTGTCACGGCCCCGGGCTGTCAACCGTGCCCGC
ACGAGTCGTACGACGAGGGAGAATGA back to topprotein sequence of rna5510 >rna5510-protein ID=rna5510-protein|Name=rna5510|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MNRHTEESHQRRKVSYLITAAFHCLQFSRALASHVERDIHRHSFATKDKL
DSHPPEDTSWRFLFQEVFNCFLLFLIADMPVPADVDGKEVTRASDASNQG
AYSYFACVAYSYIDCSSSGSCSDLNFFSVSIATTSLVCGVIFESLSIPYF
S back to topmRNA from alignment at CM002466.1:155760..156384+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5510 ID=rna5510|Name=rna5510|organism=Nannochloropsis gaditana|type=mRNA|length=625bp|location=Sequence derived from alignment at CM002466.1:155760..156384+ (Nannochloropsis gaditana)
AACATTTTAGATGAACCGCCACACCGAAGAATCCCACCAGCGGAGGAAAG
TATCTTACCTTATCACCGCAGCATTCCATTGTCTCCAATTCTCACGGGCT
CTGGCTTCGCATGTCGAACGTGATATTCACAGGCACAGCTTTGCTACCAA
GGATAAACTAGACTCACATCCTCCAGAGGATACGTCGTGGCGATTTTTAT
TTCAGGAAGTTTTTAattgctttcttctttttctgaTAGCGGATATGCCT
GTTCCTGCCGATGTTgacgggaaggaagtaaCGCGCGCATCCGATGCTTC
CAATCAAGGTGCGTACTCCTATTTTGCATGCGTAGCTTACTCATATATTG
ATTGTTCAAGTTCAGGTTCCTGCTCAGATCTTAATTTTTTCTCAGTCTCT
ATCGCAACTACCTCTCTGGTGTGCGGTGTGATATTCGAATCCCTTTCCAT
TCCGTACTTTTCGTGATCGTAGTCTATCTGAGCATGCCATGCTGAAATTA
ACCTACAATTTATCAAAATATGTGACCCCATCGTTAGAGACCTGAAAATT
TCCATCCAATGACATTCCATGTACGGATCAATATTTATTCTTCGTCAGCC
CCGAAAGCTCGGAAGACAAACTCCC back to topCoding sequence (CDS) from alignment at CM002466.1:155760..156384+ >rna5510 ID=rna5510|Name=rna5510|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002466.1:155760..156384+ (Nannochloropsis gaditana)
ATGAACCGCCACACCGAAGAATCCCACCAGCGGAGGAAAGTATCTTACCT
TATCACCGCAGCATTCCATTGTCTCCAATTCTCACGGGCTCTGGCTTCGC
ATGTCGAACGTGATATTCACAGGCACAGCTTTGCTACCAAGGATAAACTA
GACTCACATCCTCCAGAGGATACGTCGTGGCGATTTTTATTTCAGGAAGT
TTTTAattgctttcttctttttctgaTAGCGGATATGCCTGTTCCTGCCG
ATGTTgacgggaaggaagtaaCGCGCGCATCCGATGCTTCCAATCAAGGT
GCGTACTCCTATTTTGCATGCGTAGCTTACTCATATATTGATTGTTCAAG
TTCAGGTTCCTGCTCAGATCTTAATTTTTTCTCAGTCTCTATCGCAACTA
CCTCTCTGGTGTGCGGTGTGATATTCGAATCCCTTTCCATTCCGTACTTT
TCGTGA back to top
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