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Properties
| Property Name | Value |
|---|
| Product | Transmembrane transporter protein, chloroquine resistant |
| Orig transcript id | gnl|cribi|Naga_100089g10.9636.mrna |
| Orig protein id | gnl|cribi|Naga_100089g10.9636 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:1044353..1046381 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp
AGACGGAGCTTAGTCTCTATAAATTGACTTATGCTTGAGAAAAGCAGGGA
GGCAGCTGCAGCCCACTTCGCGTTGAAGACGCGACTGTCATGCACAAAAC
AACCCAAACAACTTCTTTCTGCATTTGCTAGTAGAATTGATCATAGTTGT
GATGAGTTTTAACTTATGTACTCGAAAGGCGCGTGCGAAGAGCGTGGAAG
GCAATGTTTCCTTTGACGCATACGTGGGGGCGTACAGCTTTTTTTAATGT
TCCTGCAGTAGCCCTGTTATCGTCTCGCTAGCATCATGCCGGTGCCTCCG
TGCGGCACGCCTGGTTATCTTTCTCTTTGACAAATGCTTGGCGGCCCTTT
CTCCCGACTAACACACATTTCATTCATAGTGCATTGGCGGTGCATGCGTC
AGCTTTTTCTGTCAACACCTTGCGTGGTCCTTGTTGCCGTAAGCGCAGCT
TTCCAAGTGTCCTTCTCCCCTGCTGCACTATCTACCTCTTATTGCCAGAG
CATGAGCGAATCTGCTCCTGAAGTCAGCCCGCCCTCGTGCACTCGTGACG
CAAAAAAGCATTGCGTTCCGTGCGAAGGAGGACTTCCAGCGTTGTCGATC
GAGCGCGTGCAAGCCGTCCTCCCCTCACTCCCTTTGTGGCGTCTAAGTAA
AGATCATAAGCGACTCTCTCGTTCTTTCACGGCCAAAAATTTCGCCGCTG
CCCTTGCTTTTATAGATGCAGTAGGAGCTGTCGCTGAGTGCGAAGGCCAC
CACCCAGACTTACACCTGACGAGCTACAGGGAAGTAGAAGTGGTCTTGTA
CACACACGCGGTAGGAGGTTTGACCGAGAACGATCTGATTATGGCTGCAT
TGATCGATACAGTACCTGCCTCATACAGCCCCAAATGGCTGAAAGAACAT
CCGGAGGCTGGAAAAAGTGCAGCACGATAGAGCATGTGAAGAAAAAATGA
AAGGATTTTGGATGAGATATGTATGGATGGAAAAGGTAGACTTAAAAAGG
ACAATGAGCAAAAGAAATGGGTATAAGAGAACTCCGATCCCGCAGACGAA
TTACAAAATGAGATGTCGTATAAGATTCGTC back to topprotein sequence of rna5457 >rna5457-protein ID=rna5457-protein|Name=rna5457|organism=Nannochloropsis gaditana|type=polypeptide|length=484bp
MISEVTEFSRDATAMSEYGSFAKKTRVGAATGGPVAKCPSILSLALLVVL
TLGSCNALVYKIMYQVYGSDGAFFVSTGVNVLYIIYGGLLLYPRMLFTDS
ITPAMKALPKRRFIIMGFLDCCGTFLAAMGAVYTPGSVQTLLNQTLIPTT
MIVSACFLRTHFSNVQLAGAALVLMGAAVTVLPAFITAESDSNNGHGASP
SQSRWYANLVFFASNLPVACSQVYKERAFKRDSVDVLYLTQWVSVFQFFF
GLALAPLQALPGIGSAHGVPLSSIPTAFLESWDCFLEKPTSVCHGQWPAP
SLLLLAFCAVNLVFNTGGLYVSKHGSAVLNVITYAVLLPVTTLIFSLRPL
MGAFTEPLSASTVLGLLLVLLGFYLYQEPMLWLGRRDHGKGVDGGDEKGK
VLREGLKEDGGGAQTVEEEEEEEEEEEDEEEQGTMGIHVPSFQERVVAGL
GPAIYQAHTQGHPYQLVPPMVNVGVSDASIFNVE back to topmRNA from alignment at CM002465.1:1044353..1046381- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=mRNA|length=2029bp|location=Sequence derived from alignment at CM002465.1:1044353..1046381- (Nannochloropsis gaditana)
GCGGTACTTCCTTACCATCGTATTCTTGTCTTATTTGAGCCTATTCCACA
GTGATAACAGCATTCTTTCATTACACATATTGAAATTATAAATCTTCGGC
TTTTATCGTTGAAGTTTTCAGTAGAATGATCTCAGAAGTGACGGAGTTTT
CAAGAGATGCTACCGCGATGTCTGAGGTACGTTTCTTCATGCCATGTTAG
GGTTACCGCATTGAAACGTCTGATTATATTCACTCGGAGTGATGCCTCTT
TATTGTGACAATTTCTTACCTTTGCATGATTATGGGCAGTACGGAAGTTT
TGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAAGT
GTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGATCA
TGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGATGG
CGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGGCG
GGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCGCT
ATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGACTG
TTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAGTG
TGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCTCA
GCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCGGC
CCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCACGG
CGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTCGG
TGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGCTC
CCAAGTGGTAGGGCTCCTGGGTTGGGATCTCACTTGCGTGTCACTTGCGT
GGATATCGATGGGAATTTGTAACGAGGGGCGCGAGTGGATGCACCAAACT
CGTCTCCATTTTCACCTCGTCTTTACCTTGATGGCCATGCACCTTTCATT
AGCCGGGGAAGAGGAGCGAAAGCGCCGCGAAGCAACAATCTCTCATCCCC
CTCCTTCTACTATCTTTTTTTTCGCACGCCTCCCCTAGTACAAGGAGAGG
GCCTTCAAGCGGGACAGCGTTGATGTCCTGTACCTGACCCAATGGGTGTC
TGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGCTCCTCTTCAAGCCCTCC
CTGGCATCGGCAGCGCCCACGGCGTCCCTCTCTCCTCCATCCCCACCGCA
TTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAACCCACCTCCGTGTGTCA
CGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCTCGCCTTCTGCGCAGTCA
ACCTTGTCTTCAACACGGGAGGACTCTACGTCTCTAAGCACGGCTCCGCT
GTTCTCAACGTGATCACCTACGCGGTTCTTCTCCCCGTGACCACCCTCAT
CTTCTCTTTACGGCCCCTCATGGGTGCCTTCACAGAGCCCCTGTCGGCGA
GCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGGGATTTTATCTCTATCAA
GAGCCAATGCTATGGCTGGGGAGACGCGACCACGGAAAAGGCGTAGATGG
GGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGGACTGAAAGAGGACGGAG
GGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GATGAGGAGGAGCAAGGCACTATGGGCATACACGTGCCTTCCTTTCAGGA
GCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTATCAGGCTCATACACAGG
GGCATCCCTACCAGTTGGTGCCTCCAATGGTGAATGTAGGGGTCTCTGAT
GCTTCCATTTTTAATGTGGAGTGATGGGGAAGTTGTACAGAGCATGTAAA
GCAACAGGACAGAAACGCAGCGTATACAGCGCTATCACATTTTCTAAGAC
GAATCTTATACGACATCTCATTTTGTAAT back to topCoding sequence (CDS) from alignment at CM002465.1:1044353..1046381- >rna5457 ID=rna5457|Name=rna5457|organism=Nannochloropsis gaditana|type=CDS|length=4365bp|location=Sequence derived from alignment at CM002465.1:1044353..1046381- (Nannochloropsis gaditana)
TACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCCTGTACCTGAC
CCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGCTCCTC
TTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCCTCTCTCCTCC
ATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAACCCAC
CTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCTCGCCT
TCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTACGTCTCTAAG
CACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTCTTCTCCCCGT
GACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCCTTCACAGAGC
CCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGGGATTT
TATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCGACCACGGAAA
AGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGGACTGA
AAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCATACACGTGCC
TTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTATCAGG
CTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAATGGTGAATGTA
GGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACGGAAGTTTTGC
GAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAAGTGTC
CATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGATCATGT
AATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGATGGCGC
GTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGGCGGGC
TTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCGCTATG
AAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGACTGTTG
CGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAGTGTGC
AAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCTCAGCC
TGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCGGCCCT
GGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCACGGCGG
AGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTCGGTGG
TACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGCTCCCA
AGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCTACCGCGATGT
CTGAGTACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCCTGTAC
CTGACCCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCCCTTGC
TCCTCTTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCCTCTCT
CCTCCATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGGAGAAA
CCCACCTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTCCTGCT
CGCCTTCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTACGTCT
CTAAGCACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTCTTCTC
CCCGTGACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCCTTCAC
AGAGCCCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCTCCTGG
GATTTTATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCGACCAC
GGAAAAGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGGGAAGG
ACTGAAAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCATACAC
GTGCCTTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCCATCTA
TCAGGCTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAATGGTGA
ATGTAGGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACGGAAGT
TTTGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTAGCAAA
GTGTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACTGGGAT
CATGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTTCTGAT
GGCGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATCTACGG
CGGGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCACGCCCG
CTATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCCTCGAC
TGTTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCAGGGAG
TGTGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGATCGTCT
CAGCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAGGGGCG
GCCCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTTATCAC
GGCGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCAATCTC
GGTGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGGCGTGC
TCCCAAGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCTACCGC
GATGTCTGAGTACAAGGAGAGGGCCTTCAAGCGGGACAGCGTTGATGTCC
TGTACCTGACCCAATGGGTGTCTGTCTTCCAGTTCTTCTTCGGCCTGGCC
CTTGCTCCTCTTCAAGCCCTCCCTGGCATCGGCAGCGCCCACGGCGTCCC
TCTCTCCTCCATCCCCACCGCATTCCTCGAAAGCTGGGACTGCTTCCTGG
AGAAACCCACCTCCGTGTGTCACGGTCAGTGGCCCGCCCCCTCCCTCCTC
CTGCTCGCCTTCTGCGCAGTCAACCTTGTCTTCAACACGGGAGGACTCTA
CGTCTCTAAGCACGGCTCCGCTGTTCTCAACGTGATCACCTACGCGGTTC
TTCTCCCCGTGACCACCCTCATCTTCTCTTTACGGCCCCTCATGGGTGCC
TTCACAGAGCCCCTGTCGGCGAGCACGGTGTTGGGCTTGCTCCTGGTGCT
CCTGGGATTTTATCTCTATCAAGAGCCAATGCTATGGCTGGGGAGACGCG
ACCACGGAAAAGGCGTAGATGGGGGGGACGAAAAGGGTAAGGTGCTCAGG
GAAGGACTGAAAGAGGACGGAGGGGGAGCGCAGACGGTGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGATGAGGAGGAGCAAGGCACTATGGGCA
TACACGTGCCTTCCTTTCAGGAGCGTGTGGTGGCAGGCTTGGGTCCAGCC
ATCTATCAGGCTCATACACAGGGGCATCCCTACCAGTTGGTGCCTCCAAT
GGTGAATGTAGGGGTCTCTGATGCTTCCATTTTTAATGTGGAGTGATACG
GAAGTTTTGCGAAGAAAACCAGAGTCGGAGCTGCAACGGGCGGGCCTGTA
GCAAAGTGTCCATCTATCCTGTCACTCGCTCTTCTCGTGGTCCTCACACT
GGGATCATGTAATGCTTTGGTGTATAAAATCATGTACCAAGTCTATGGTT
CTGATGGCGCGTTTTTTGTTTCGACGGGCGTCAACGTTTTGTACATTATC
TACGGCGGGCTTTTGCTGTACCCTCGGATGCTTTTCACTGATAGCATCAC
GCCCGCTATGAAAGCCCTGCCGAAGCGCCGATTCATAATAATGGGATTCC
TCGACTGTTGCGGCACATTTCTTGCGGCGATGGGTGCCGTCTATACGCCA
GGGAGTGTGCAAACCCTCCTGAACCAGACGCTCATCCCGACCACCATGAT
CGTCTCAGCCTGCTTCTTGAGGACACACTTCTCCAACGTCCAATTAGCAG
GGGCGGCCCTGGTTCTGATGGGGGCCGCGGTCACTGTCCTGCCTGCCTTT
ATCACGGCGGAGAGCGATAGCAACAATGGGCATGGAGCGAGCCCTTCTCA
ATCTCGGTGGTACGCGAACCTGGTCTTTTTCGCCAGCAACCTCCCAGTGG
CGTGCTCCCAAGTGATGATCTCAGAAGTGACGGAGTTTTCAAGAGATGCT
ACCGCGATGTCTGAG back to top
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