EWM25245.1, cds5426 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25245.1 vs. NCBI_GenBank
Match: gi|585106939|gb|EWM25245.1| (hypothetical protein Naga_100571g3 [Nannochloropsis gaditana]) HSP 1 Score: 134.42 bits (337), Expect = 1.182e-39 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 Query: 1 MILARQKALQEEEERLQQQREEEEKKIAAERAAEEAELAAKEEEKRLKKEKARAKMEKQKAEGTYMTKAQREKAMRRQE 79 MILARQKALQEEEERLQQQREEEEKKIAAERAAEEAELAAKEEEKRLKKEKARAKMEKQKAEGTYMTKAQREKAMRRQE Sbjct: 1 MILARQKALQEEEERLQQQREEEEKKIAAERAAEEAELAAKEEEKRLKKEKARAKMEKQKAEGTYMTKAQREKAMRRQE 79
BLAST of EWM25245.1 vs. NCBI_GenBank
Match: gi|673014130|ref|XP_008861026.1| (translation initiation factor aIF-2 [Aphanomyces invadans] >gi|574482624|gb|ETW09615.1| translation initiation factor aIF-2 [Aphanomyces invadans]) HSP 1 Score: 56.6102 bits (135), Expect = 1.541e-7 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0 Query: 5 RQKALQEEEERLQQQREEEEKKIAAERAAEEAELAA--KEEE----KRLKKEKARAKMEKQKAEGTYMTKAQREKAMRRQ 78 RQ AL+ EEERL++ +EEE++K R AEEA L A K+EE KRL K +AK++ QKA+GTYMTKAQ+EKA R Q Sbjct: 124 RQAALKAEEERLKKIQEEEDRKF---REAEEARLEAIRKKEELAERKRLAK---KAKVDAQKADGTYMTKAQKEKAKRAQ 197
BLAST of EWM25245.1 vs. NCBI_GenBank
Match: gi|698794350|ref|XP_009830204.1| (translation initiation factor aIF-2 [Aphanomyces astaci] >gi|574114793|gb|ETV80280.1| translation initiation factor aIF-2 [Aphanomyces astaci]) HSP 1 Score: 56.6102 bits (135), Expect = 1.666e-7 Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 0 Query: 5 RQKALQEEEERLQQQREEEEKKIAAERAAEEAELAA---KEEEKRLKKEKARAKMEKQKAEGTYMTKAQREKAMRRQ 78 RQ L+ EE+RL+Q +EEE++K R AEEA L KEE K++ +AK+E QKAEGTYMTKAQ+EKA R Q Sbjct: 119 RQAVLKAEEDRLKQIQEEEDRKF---REAEEARLDVIRKKEELAERKRQAKQAKVEAQKAEGTYMTKAQKEKARRAQ 192 The following BLAST results are available for this feature:
BLAST of EWM25245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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