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Properties
| Property Name | Value |
|---|
| Product | chromatin assembly factor 1 subunit b |
| Orig transcript id | gnl|cribi|Naga_100281g5.5090.mrna |
| Orig protein id | gnl|cribi|Naga_100281g5.5090 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:813532..817309 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5366 ID=rna5366|Name=rna5366|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp
ATCAATTAATTGTTGTCCATAATTTATTAACATATTAATCCGTTAATATT
GAACACCCCAGGAACAGTAGGAGGCGTCCTAGGCATCACTTTGATCTTTC
CTCTGGATACTGCAAAAGTCCGACTACAGGCATATCCCCACTATAAAGGC
CCTATCGATGTGATACGTTCGATGGTGCGCGAGGGTGGAATTAGCTCCCT
GTACCGTGGGTTGTTGAGCCCTCAAGCTGGCTTTGGTGTGACGTTCGCGA
TCTCCTTTGCTGGGTATGGTCAGGGCACGCGGTTTTTTCGGAAAGGCGAC
AACAAACGAGAGCTCACACTAGGGGAAATGACAGCATCAGGTGCATGGGC
TGGGCTTCTACAGAGTCCTGCACGTCAAATATTCGAAAGAATAAAATCAG
TCATGCAAGTCCGAAAAGCCGCTGGCGGGGCTGACAAACCCCCCTACCGA
TGGTCAGGTGAATGCCTGGTACAGCTTGTGAGAAAAGAAGGCCTTTACAA
TGGCCTATTTCGCGGTTTAGATGCAACAGCTTTAAGGGAGGTGCCTCAAT
TTGCTGTATACTATCCCCTGTATGAGATGAACGTTCGCGCCCTCCAAAAA
ATGATGGCTGCATCGAACGCTTCCGGCAGCAGCAGCAATGAAAGCAATAT
CGTACACCGGAAGCCTTCGTCCTCGACGCCTTTGCCTCCCCATCTCCTCC
TCCTCGCAGGCGGCGTGGCCGGGACAGTCCAATGGCTCCCTCCTTTCTAC
TGTCTCGACGTGTTAAAAAGCCGAATGCAAAGTGCCTTGCCTGGGGTGTA
CGACAATGTTTGGGACTGCGCGAAGAAAAGCTACCAACAAGAGGGGATAG
GCGTTTTCTTTCGAGGGCTACCTGTGGCTTTGATCCGGGCTTTCCCGCTA
AATGCCTGCATCTTCCTGGGCTACGAAACCACGTTGGCCGCCCTGCACCA
GGAGGAAGAAATCCCGCATCTGCCCCCCCCTGAGTAAAAGAAAATCTATT
TTCAGGAGGGTCATGTATAGAGCAGGCCGTAGGCCGATACGATCACTGGA
TGATTTCCCTCGATGGCCCCTCTGTCCTGCAGAGCATGGCCATGCACAAA
GTGAGGCTAACGCATCGATACATGTTGGATGGGTCCTCGTCTGTAATATG
AAGAATTTTTTCTTTGGTGTATAATGC back to topprotein sequence of rna5366 >rna5366-protein ID=rna5366-protein|Name=rna5366|organism=Nannochloropsis gaditana|type=polypeptide|length=923bp
MVSSFSFSPPQFQLWLLHLDENEESKFQDYLYNFENHQRSVNSVRFSPDG
RALATASDGGVIFVYLLPPGRPTRFWRRPMCQRMVLCRLVRTTQSDIYDL
AWSPSSRELCSVSVDSKVAVWDVTGEKSPLLSTFTSHSNYVQGACWDPAD
EFLVSQSNDRSCRVYVRKELRGGKKKRKKKKGEEGGKEGKEEAAPPTEWV
EQGLLRLACREEGGGEEEEEAGREMSKLVPVASSTPVVPVERKAGQGHRG
GGHGGGKREDHVAGEHAPALKQAGTPVGKEGEEKKPEETGAVETELSGVG
QEGEEGRQGRMEGEVKEQGEEGPRPGQGGKPASKRTPRLHLFADETVPSF
FRRPAWSPDGCLLLTPTGLLPPSGHRGGPEGDNKAGGDSAHTRFSTHVYA
RGAFAKPVLELPHPGGKASVVVRFCPQLFALKTQERKDLPSLPPSLPPSL
PPSLPPSFLPAGTPAGEEKTEPSPDPPPSLTNLPYRMVFAVLTVGGIYVY
DTQHHFPLAVVKNSHYAPLTDAAWVNDGSALVVTSMDGYVTVVCLPEGEL
GAKLELEKVPGTVRQVHGAHYDGIKREAEEREEEEEEEEREERERRSGRE
KVREEEEKRKARRQQEESGEEEKRREVPVDQSRQAGEVIDVCDSEEEDGM
AEATANLEGPLGEGEEGRKDPQKGRGGRTEEAGILSDSESLHSEEVSEEE
DDEGNGQKEETGEGAVAGEGAITEESDDEWEEKRMAVTTGTGTKKGEHNH
AQEERQACHGVKRKSDEGGNEEEMVPQVGEKQAQGKNDDPQSTLTPGRKT
RTVPRASPFHAQGSPSAAPPNLSHSSSDGAVSSAQKKKRIRPTPVGENHA
AEVFAAAAGVGEARLPVARLMTEEGSRSSCQGTGVLKEANSGPAAAPLKI
AGKASNKPVKKRLAPTLISSSLS back to topmRNA from alignment at CM002465.1:813532..817309- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5366 ID=rna5366|Name=rna5366|organism=Nannochloropsis gaditana|type=mRNA|length=3778bp|location=Sequence derived from alignment at CM002465.1:813532..817309- (Nannochloropsis gaditana)
CTGGTAATGTGGCGTAGACGAGTGTCACCAAAAGAGTAAGGAAATGGATG
GTAATCTCTCTCTCCCCCCCCCTCCTAGGGTACAGAAATCGGAAGGACGC
ACACCAGCTTTCTTGCCTACACCTACCACCAGCACGATGAAAATAACAAC
ACCACAGATTACATGGCATGGAGGCGAGGCTGGTAAGAATGATCCAGTGT
TGAGTGCGGATGTACATCCCTGCGGTGTTCTTGCCACGGGGGGGGCAGAC
GCGGAGGTGCGGGTAAGTCGATTTGGGCGATCGATAGGGGAGGCCGATAA
AGAAAGAGGGGATGGCAAATATGTGGAGTGCACGTGCATCTGTCATACAT
TCATCGGCCGCAAATGCTGTTCATCATGCTTTACGAGCCTGAGAGGGCGG
GGAAGGCGGCACTTTCTTCCCTCCTTGGTCGCCATCAGAGGCTGAGGCAG
TCTTCTCTCTGAAAGTGATTGGTTACCTCTTCAACTCCCCGCGATGACCG
CTGTGCCCTATCTATGCAGCATGAAACTTGATCATGGTTTCCTCCTTTTC
TTTCTCCCCCCCGCAATTTCAGCTTTGGCTTCTCCACCTGGACGAGAACG
AGGAGAGCAAATTTCAAGACTACCTCTACAATTTCGAAAATCACCAACGC
TCCGTCAACAGCGTGCGCTTCTCGCCGGATGGACGCGCGCTCGCGACTGC
AAGTGACGGGGGCGTGATCTTCGTCTACCTCCTTCCCCCCGGGCGCCCCA
CCCGCTTTTGGCGACGGCCCATGTGCCAGCGGATGGTCCTCTGCCGCCTG
GTTCGGACCACGCAGTCCGACATCTACGACCTAGCCTGGTCCCCGTCCTC
GCGGGAGCTCTGCAGCGTCTCGGTGGACAGCAAGGTGGCGGTGTGGGACG
TGACGGGCGAGAAGAGCCCCTTGCTTTCCACCTTCACCAGTCACAGCAAC
TATGTCCAGGGCGCCTGCTGGGACCCGGCGGACGAATTTTTGGTCTCTCA
GAGCAACGATCGGAGCTGCAGGGTGTACGTGAGGAAGGAGTTGAGGGGAG
GGAAGAAGAAGCGGAAAAAGAAGAAAGGGGAGGAGGGGGGGAAGGAAGGG
AAGGAGGAGGCAGCGCCGCCCACCGAGTGGGTGGAGCAGGGACTGCTGCG
TCTCGCCTGCCGTGAGGAAGGTGGTGGGGAGGAGGAAGAGGAAGCGGGGC
GGGAGATGAGCAAGCTGGTTCCGGTTGCGTCCTCGACGCCAGTGGTGCCA
GTGGAGAGAAAAGCCGGTCAGGGACATCGGGGAGGGGGGCATGGAGGAGG
GAAGAGGGAAGACCACGTCGCCGGCGAGCACGCGCCGGCTCTGAAGCAGG
CGGGAACACCCGTGGGCAAGGAGGGAGAGGAAAAAAAGCCAGAAGAGACG
GGGGCGGTGGAGACGGAGCTCTCAGGGGTCGGTCAGGAGGGAGAGGAAGG
GAGGCAGGGCAGGATGGAGGGCGAGGTGAAAGAGCAGGGCGAGGAGGGGC
CCCGTCCTGGCCAAGGCGGCAAACCCGCGTCCAAACGTACCCCTCGCCTC
CACCTCTTTGCGGACGAGACCGTCCCGTCCTTCTTCCGCCGACCTGCCTG
GTCCCCGGACGGCTGCCTCCTCCTCACGCCCACGGGTCTTCTCCCTCCCT
CGGGGCACAGGGGCGGGCCCGAAGGAGACAACAAAGCCGGCGGCGACAGT
GCCCACACGCGTTTTTCCACGCACGTGTACGCGCGGGGGGCGTTCGCAAA
GCCTGTGCTCGAGCTGCCTCACCCGGGCGGAAAGGCTTCTGTCGTCGTCC
GCTTTTGCCCCCAACTTTTTGCCCTGAAAACCCAGGAGCGGAAAGACCTG
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
TTCCTTCCTGCCCGCCGGCACGCCCGCGGGGGAGGAGAAGACAGAGCCCT
CGCCCGATCCCCCTCCTTCTTTGACGAACCTGCCTTACCGGATGGTCTTC
GCGGTCTTGACCGTGGGCGGTATCTATGTGTACGACACCCAGCACCATTT
CCCTCTGGCAGTGGTGAAGAACTCGCACTACGCCCCCTTGACCGATGCAG
CCTGGGTCAATGACGGCTCCGCCCTGGTTGTTACCTCCATGGACGGATAC
GTGACGGTGGTGTGCCTCCCGGAAGGGGAGCTAGGGGCGAAGTTGGAGCT
GGAGAAAGTTCCAGGAACGGTCCGGCAGGTCCACGGGGCCCACTACGACG
GGATCAAGAGGGAAGCGGAGGAAAGGGAGGAGGAAGAGGAGGAAGAAGAG
CGTGAAGAAAGGGAGCGGAGGTCAGGGAGGGAAAAAGTGAGGGAGGAGGA
GGAGAAACGGAAGGCCAGGAGGCAACAAGAAGAATCGGGGGAGGAGGAGA
AAAGACGGGAGGTTCCAGTAGACCAATCCAGACAAGCTGGGGAGGTTATC
GATGTGTGTGACTCCGAAGAGGAGGACGGAATGGCAGAGGCGACAGCGAA
TTTGGAGGGGCCCTTGGGGGAGGGCGAAGAGGGAAGGAAGGATCCTCAGA
AAGGGAGGGGAGGGAGGACGGAGGAGGCGGGCATCCTTTCCGACAGCGAG
TCGCTTCACAGTGAAGAAGTCAGCGAGGAGGAGGATGACGAAGGGAATGG
ACAAAAGGAGGAAACAGGAGAGGGGGCGGTAGCAGGAGAGGGGGCGATAA
CTGAAGAAAGTGACGACGAGTGGGAGGAGAAGAGGATGGCGGTCACCACA
GGTACTGGGACTAAGAAGGGAGAGCACAACCATGCGCAGGAGGAAAGGCA
AGCGTGCCATGGCGTCAAGCGCAAGAGTGACGAGGGCGGCAACGAGGAAG
AAATGGTCCCACAAGTAGGAGAGAAGCAGGCCCAAGGCAAGAATGACGAT
CCCCAGTCCACTCTGACGCCGGGAAGGAAGACGCGAACGGTGCCAAGAGC
CAGTCCTTTCCATGCACAGGGGTCTCCCTCTGCAGCCCCGCCCAATTTGT
CGCATAGCAGCAGCGATGGCGCCGTATCAAGCGCACAGAAAAAGAAACGC
ATCCGTCCCACGCCCGTGGGGGAAAACCATGCTGCTGAGGTGTTTGCGGC
CGCGGCGGGCGTGGGCGAGGCGAGGTTGCCCGTCGCGCGGCTAATGACGG
AAGAAGGGAGCAGGAGCAGCTGTCAAGGGACAGGAGTCTTGAAGGAGGCC
AACAGTGGACCTGCTGCAGCGCCACTTAAGATCGCGGGAAAGGCAAGCAA
CAAGCCTGTGAAAAAACGCTTGGCACCCACACTGATCTCCTCTTCTCTGT
CCTGAGCTTGCGGAGGGAAGAAAAGTCAAGGATGCCGTAGAGAAGGGAGG
GCGTGGTGCGGAAGACTCACATCTCACATGAGGGTCCTAGCAATACGCGA
AAAGAGTCGCTTAAAGGTAAAGCGGAGCGATACCGCTCATTTCGACGGCG
GTATCGCCCTTGTCCGTCCACACAAAGTCAAGAATGTGTGGCAAAGAGCA
GAGCGGCATCCTCGGGTGAGTATGGAGTAGAGAAGGACAATGCTGGAGGG
AGAAGACTGTCCAATAGGGAAACTGAAATGAAACGTTTTCAGAAAAGGTA
GTGAGCAATGAGACCTGGATTGTTATGATTGATGGAGGAGGTCTTATATG
TGTAGAGAGATATCAGCTTACTGCGTGAGCAAGTCTTCATGACCAAGCTT
ACGAGCGAGACAATAACAAGACGAAGAGGGGCGGTGCATCAATCGATGAA
GCATTATACACCAAAGAAAAAATTCTTC back to topCoding sequence (CDS) from alignment at CM002465.1:813532..817309- >rna5366 ID=rna5366|Name=rna5366|organism=Nannochloropsis gaditana|type=CDS|length=2772bp|location=Sequence derived from alignment at CM002465.1:813532..817309- (Nannochloropsis gaditana)
ATGGTTTCCTCCTTTTCTTTCTCCCCCCCGCAATTTCAGCTTTGGCTTCT
CCACCTGGACGAGAACGAGGAGAGCAAATTTCAAGACTACCTCTACAATT
TCGAAAATCACCAACGCTCCGTCAACAGCGTGCGCTTCTCGCCGGATGGA
CGCGCGCTCGCGACTGCAAGTGACGGGGGCGTGATCTTCGTCTACCTCCT
TCCCCCCGGGCGCCCCACCCGCTTTTGGCGACGGCCCATGTGCCAGCGGA
TGGTCCTCTGCCGCCTGGTTCGGACCACGCAGTCCGACATCTACGACCTA
GCCTGGTCCCCGTCCTCGCGGGAGCTCTGCAGCGTCTCGGTGGACAGCAA
GGTGGCGGTGTGGGACGTGACGGGCGAGAAGAGCCCCTTGCTTTCCACCT
TCACCAGTCACAGCAACTATGTCCAGGGCGCCTGCTGGGACCCGGCGGAC
GAATTTTTGGTCTCTCAGAGCAACGATCGGAGCTGCAGGGTGTACGTGAG
GAAGGAGTTGAGGGGAGGGAAGAAGAAGCGGAAAAAGAAGAAAGGGGAGG
AGGGGGGGAAGGAAGGGAAGGAGGAGGCAGCGCCGCCCACCGAGTGGGTG
GAGCAGGGACTGCTGCGTCTCGCCTGCCGTGAGGAAGGTGGTGGGGAGGA
GGAAGAGGAAGCGGGGCGGGAGATGAGCAAGCTGGTTCCGGTTGCGTCCT
CGACGCCAGTGGTGCCAGTGGAGAGAAAAGCCGGTCAGGGACATCGGGGA
GGGGGGCATGGAGGAGGGAAGAGGGAAGACCACGTCGCCGGCGAGCACGC
GCCGGCTCTGAAGCAGGCGGGAACACCCGTGGGCAAGGAGGGAGAGGAAA
AAAAGCCAGAAGAGACGGGGGCGGTGGAGACGGAGCTCTCAGGGGTCGGT
CAGGAGGGAGAGGAAGGGAGGCAGGGCAGGATGGAGGGCGAGGTGAAAGA
GCAGGGCGAGGAGGGGCCCCGTCCTGGCCAAGGCGGCAAACCCGCGTCCA
AACGTACCCCTCGCCTCCACCTCTTTGCGGACGAGACCGTCCCGTCCTTC
TTCCGCCGACCTGCCTGGTCCCCGGACGGCTGCCTCCTCCTCACGCCCAC
GGGTCTTCTCCCTCCCTCGGGGCACAGGGGCGGGCCCGAAGGAGACAACA
AAGCCGGCGGCGACAGTGCCCACACGCGTTTTTCCACGCACGTGTACGCG
CGGGGGGCGTTCGCAAAGCCTGTGCTCGAGCTGCCTCACCCGGGCGGAAA
GGCTTCTGTCGTCGTCCGCTTTTGCCCCCAACTTTTTGCCCTGAAAACCC
AGGAGCGGAAAGACCTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCTTCCTTCCTGCCCGCCGGCACGCCCGCGGGGGA
GGAGAAGACAGAGCCCTCGCCCGATCCCCCTCCTTCTTTGACGAACCTGC
CTTACCGGATGGTCTTCGCGGTCTTGACCGTGGGCGGTATCTATGTGTAC
GACACCCAGCACCATTTCCCTCTGGCAGTGGTGAAGAACTCGCACTACGC
CCCCTTGACCGATGCAGCCTGGGTCAATGACGGCTCCGCCCTGGTTGTTA
CCTCCATGGACGGATACGTGACGGTGGTGTGCCTCCCGGAAGGGGAGCTA
GGGGCGAAGTTGGAGCTGGAGAAAGTTCCAGGAACGGTCCGGCAGGTCCA
CGGGGCCCACTACGACGGGATCAAGAGGGAAGCGGAGGAAAGGGAGGAGG
AAGAGGAGGAAGAAGAGCGTGAAGAAAGGGAGCGGAGGTCAGGGAGGGAA
AAAGTGAGGGAGGAGGAGGAGAAACGGAAGGCCAGGAGGCAACAAGAAGA
ATCGGGGGAGGAGGAGAAAAGACGGGAGGTTCCAGTAGACCAATCCAGAC
AAGCTGGGGAGGTTATCGATGTGTGTGACTCCGAAGAGGAGGACGGAATG
GCAGAGGCGACAGCGAATTTGGAGGGGCCCTTGGGGGAGGGCGAAGAGGG
AAGGAAGGATCCTCAGAAAGGGAGGGGAGGGAGGACGGAGGAGGCGGGCA
TCCTTTCCGACAGCGAGTCGCTTCACAGTGAAGAAGTCAGCGAGGAGGAG
GATGACGAAGGGAATGGACAAAAGGAGGAAACAGGAGAGGGGGCGGTAGC
AGGAGAGGGGGCGATAACTGAAGAAAGTGACGACGAGTGGGAGGAGAAGA
GGATGGCGGTCACCACAGGTACTGGGACTAAGAAGGGAGAGCACAACCAT
GCGCAGGAGGAAAGGCAAGCGTGCCATGGCGTCAAGCGCAAGAGTGACGA
GGGCGGCAACGAGGAAGAAATGGTCCCACAAGTAGGAGAGAAGCAGGCCC
AAGGCAAGAATGACGATCCCCAGTCCACTCTGACGCCGGGAAGGAAGACG
CGAACGGTGCCAAGAGCCAGTCCTTTCCATGCACAGGGGTCTCCCTCTGC
AGCCCCGCCCAATTTGTCGCATAGCAGCAGCGATGGCGCCGTATCAAGCG
CACAGAAAAAGAAACGCATCCGTCCCACGCCCGTGGGGGAAAACCATGCT
GCTGAGGTGTTTGCGGCCGCGGCGGGCGTGGGCGAGGCGAGGTTGCCCGT
CGCGCGGCTAATGACGGAAGAAGGGAGCAGGAGCAGCTGTCAAGGGACAG
GAGTCTTGAAGGAGGCCAACAGTGGACCTGCTGCAGCGCCACTTAAGATC
GCGGGAAAGGCAAGCAACAAGCCTGTGAAAAAACGCTTGGCACCCACACT
GATCTCCTCTTCTCTGTCCTGA back to top
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